AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 282
Pass (FILTER=PASS): 43 (15.2%)
Fail (FILTER=FAIL): 239 (84.8%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 73
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 41
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(low<high): 11
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
total_reads_below_min(4.0<8.0): 3
Breakdown by confidence:
high: 43 pass, 5 fail (total: 48)
low: 0 pass, 118 fail (total: 118)
medium: 0 pass, 116 fail (total: 116)
Arriba filter: 282 rows -> 43 PASS; wrote A673_FFPE_RNA_0001_B23LG7FLT4_2.arriba.fusions.filtered.tsv and A673_FFPE_RNA_0001_B23LG7FLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: A673_FFPE_RNA_0001_B23LG7FLT4_2.arriba.fusions.filter_summary.txt