AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 471
Pass (FILTER=PASS): 68 (14.4%)
Fail (FILTER=FAIL): 403 (85.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 104
confidence_below_min(medium<high): 68
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 31
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 30
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 23
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 22
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 14
confidence_below_min(low<high): 14
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 6
total_reads_below_min(7.0<8.0): 6
Breakdown by confidence:
high: 68 pass, 14 fail (total: 82)
low: 0 pass, 220 fail (total: 220)
medium: 0 pass, 169 fail (total: 169)
Arriba filter: 471 rows -> 68 PASS; wrote Hs746T_FFPE_RNA_0001_B23LG7FLT4_1.arriba.fusions.filtered.tsv and Hs746T_FFPE_RNA_0001_B23LG7FLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: Hs746T_FFPE_RNA_0001_B23LG7FLT4_1.arriba.fusions.filter_summary.txt