[W::hts_idx_load3] The index file is older than the data file: A549_FFPE_01_RNA_0001_B23LG7FLT4_3.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file: ref_annot.bed ... Done
Load BAM file ... Done
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Total splicing Events: 939
Known Splicing Events: 152
Partial Novel Splicing Events: 0
Novel Splicing Events: 787
Filtered Splicing Events: 0
Total splicing Junctions: 109
Known Splicing Junctions: 13
Partial Novel Splicing Junctions: 0
Novel Splicing Junctions: 96
===================================================================
Create BED file ...
Create Interact file ...