[W::hts_idx_load3] The index file is older than the data file: 22Rv1_FFPE_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	6518749
Known Splicing Events:	6398540
Partial Novel Splicing Events:	42071
Novel Splicing Events:	73405
Filtered Splicing Events:	4733

Total splicing  Junctions:	129408
Known Splicing Junctions:	119806
Partial Novel Splicing Junctions:	4598
Novel Splicing Junctions:	5004

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Create BED file ...
Create Interact file ...