Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/67b247941346b261489e86b4dc667b/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/8678ddd531a0963c2a78d413a22cde/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/67b247941346b261489e86b4dc667b/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/8678ddd531a0963c2a78d413a22cde/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/817c5f6743d444fb0b250eccee3604/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.dlPvfGouGo/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary
-sample contains 258603020 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir  -J /tmp/nxf.dlPvfGouGo/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.Chimeric.out.junction  -O /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.dlPvfGouGo/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2630000], r-building interval tree based on /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[2660000], rate-building interval tree based on /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[5600000], rate=85214.30/min -building interval tree based on /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[5600000], rate=53291.04/min 
[5610000], rate=53293.22/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

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done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.dlPvfGouGo/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -252225.844187
EM: Round [1] log likelihood: -251456.625387
EM: Round [2] log likelihood: -251190.889878
EM: Round [3] log likelihood: -251068.076188
EM: Round [4] log likelihood: -251002.610960
EM: Round [5] log likelihood: -250964.699390
EM: Round [6] log likelihood: -250941.370001
EM: Round [7] log likelihood: -250926.260099
EM: Round [8] log likelihood: -250916.024998
EM: Round [9] log likelihood: -250908.814882
EM: Round [10] log likelihood: -250903.560541
EM: Round [11] log likelihood: -250899.618439
EM: Round [12] log likelihood: -250896.586484
EM: Round [13] log likelihood: -250894.204641
EM: Round [14] log likelihood: -250892.299366
EM: Round [15] log likelihood: -250890.751481
EM: Round [16] log likelihood: -250889.477002
EM: Round [17] log likelihood: -250888.415363
EM: Round [18] log likelihood: -250887.521977
EM: Round [19] log likelihood: -250886.763409
EM: Round [20] log likelihood: -250886.114168
EM: Round [21] log likelihood: -250885.554537
EM: Round [22] log likelihood: -250885.069058
EM: Round [23] log likelihood: -250884.645473
EM: Round [24] log likelihood: -250884.273949
EM: Round [25] log likelihood: -250883.946528
EM: Round [26] log likelihood: -250883.656709
EM: Round [27] log likelihood: -250883.399136
EM: Round [28] log likelihood: -250883.169367
EM: Round [29] log likelihood: -250882.963692
EM: Round [30] log likelihood: -250882.778990
EM: Round [31] log likelihood: -250882.612622
EM: Round [32] log likelihood: -250882.462346
EM: Round [33] log likelihood: -250882.326244
EM: Round [34] log likelihood: -250882.202671
EM: Round [35] log likelihood: -250882.090207
EM: Round [36] log likelihood: -250881.987625
EM: Round [37] log likelihood: -250881.893856
EM: Round [38] log likelihood: -250881.807970
EM: Round [39] log likelihood: -250881.729150
EM: Round [40] log likelihood: -250881.656681
EM: Round [41] log likelihood: -250881.589934
EM: Round [42] log likelihood: -250881.528351
EM: Round [43] log likelihood: -250881.471440
EM: Round [44] log likelihood: -250881.418764
EM: Round [45] log likelihood: -250881.369933
EM: Round [46] log likelihood: -250881.324600
EM: Round [47] log likelihood: -250881.282455
EM: Round [48] log likelihood: -250881.243220
EM: Round [49] log likelihood: -250881.206645
EM: Round [50] log likelihood: -250881.172505
EM: Round [51] log likelihood: -250881.140600
EM: Round [52] log likelihood: -250881.110746
EM: Round [53] log likelihood: -250881.082779
EM: Round [54] log likelihood: -250881.056549
EM: Round [55] log likelihood: -250881.031921
EM: Round [56] log likelihood: -250881.008771
EM: Round [57] log likelihood: -250880.986989
EM: Round [58] log likelihood: -250880.966471
EM: Round [59] log likelihood: -250880.947126
EM: Round [60] log likelihood: -250880.928868
EM: Round [61] log likelihood: -250880.911620
EM: Round [62] log likelihood: -250880.895310
EM: Round [63] log likelihood: -250880.879873
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EM: Round [65] log likelihood: -250880.851387
EM: Round [66] log likelihood: -250880.838231
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EM: Round [68] log likelihood: -250880.813862
EM: Round [69] log likelihood: -250880.802566
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EM: Round [72] log likelihood: -250880.771801
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EM: Round [75] log likelihood: -250880.745088
EM: Round [76] log likelihood: -250880.736963
EM: Round [77] log likelihood: -250880.729191
EM: Round [78] log likelihood: -250880.721750
EM: Round [79] log likelihood: -250880.714624
EM: Round [80] log likelihood: -250880.707794
EM: Round [81] log likelihood: -250880.701244
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EM: Round [83] log likelihood: -250880.688925
EM: Round [84] log likelihood: -250880.683129
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EM: Round [86] log likelihood: -250880.672203
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EM: Round [89] log likelihood: -250880.657313
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EM: Round [91] log likelihood: -250880.648275
EM: Round [92] log likelihood: -250880.643997
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EM: Round [96] log likelihood: -250880.628328
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EM: Round [99] log likelihood: -250880.617914
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EM: Round [101] log likelihood: -250880.611527
EM: Round [102] log likelihood: -250880.608487
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EM: Round [104] log likelihood: -250880.602691
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EM: Round [110] log likelihood: -250880.587320
EM: Round [111] log likelihood: -250880.585019
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EM: Round [113] log likelihood: -250880.580615
EM: Round [114] log likelihood: -250880.578508
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EM: Round [120] log likelihood: -250880.567045
EM: Round [121] log likelihood: -250880.565314
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EM: Round [123] log likelihood: -250880.561990
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EM: Round [126] log likelihood: -250880.557325
EM: Round [127] log likelihood: -250880.555851
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EM: Round [131] log likelihood: -250880.550320
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EM: Round [133] log likelihood: -250880.547759
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EM: Round [136] log likelihood: -250880.544151
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EM: Round [139] log likelihood: -250880.540799
EM: Round [140] log likelihood: -250880.539735
EM: Round [141] log likelihood: -250880.538696
EM: Round [142] log likelihood: -250880.537682
EM: Round [143] log likelihood: -250880.536691
EM: Round [144] log likelihood: -250880.535724
EM: Round [145] log likelihood: -250880.534779
EM: Round [146] log likelihood: -250880.533855
EM: Round [147] log likelihood: -250880.532953
EM: Round [148] log likelihood: -250880.532072
EM: Round [149] log likelihood: -250880.531210
EM: Round [150] log likelihood: -250880.530369
EM: Round [151] log likelihood: -250880.529546
EM: Round [152] log likelihood: -250880.528741
EM: Round [153] log likelihood: -250880.527954
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EM: Round [155] log likelihood: -250880.526432
EM: Round [156] log likelihood: -250880.525696
EM: Round [157] log likelihood: -250880.524977
EM: Round [158] log likelihood: -250880.524272
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EM: Round [160] log likelihood: -250880.522909
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EM: Round [165] log likelihood: -250880.519746
EM: Round [166] log likelihood: -250880.519153
EM: Round [167] log likelihood: -250880.518572
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EM: Round [170] log likelihood: -250880.516900
EM: Round [171] log likelihood: -250880.516366
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EM: Round [189] log likelihood: -250880.508366
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EM: Round [196] log likelihood: -250880.505932
EM: Round [197] log likelihood: -250880.505609
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EM: Round [200] log likelihood: -250880.504676
EM: Round [201] log likelihood: -250880.504376
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EM: Round [203] log likelihood: -250880.503792
EM: Round [204] log likelihood: -250880.503508
EM: Round [205] log likelihood: -250880.503229
EM: Round [206] log likelihood: -250880.502954
EM: Round [207] log likelihood: -250880.502685
EM: Round [208] log likelihood: -250880.502420
EM: Round [209] log likelihood: -250880.502160
EM: Round [210] log likelihood: -250880.501904
EM: Round [211] log likelihood: -250880.501653
EM: Round [212] log likelihood: -250880.501406
EM: Round [213] log likelihood: -250880.501163
EM: Round [214] log likelihood: -250880.500925
EM: Round [215] log likelihood: -250880.500690
EM: Round [216] log likelihood: -250880.500459
EM: Round [217] log likelihood: -250880.500233
EM: Round [218] log likelihood: -250880.500010
EM: Round [219] log likelihood: -250880.499791
EM: Round [220] log likelihood: -250880.499575
EM: Round [221] log likelihood: -250880.499363
EM: Round [222] log likelihood: -250880.499155
EM: Round [223] log likelihood: -250880.498950
EM: Round [224] log likelihood: -250880.498748
EM: Round [225] log likelihood: -250880.498550
EM: Round [226] log likelihood: -250880.498354
EM: Round [227] log likelihood: -250880.498162
EM: Round [228] log likelihood: -250880.497973
EM: Round [229] log likelihood: -250880.497788
EM: Round [230] log likelihood: -250880.497605
EM: Round [231] log likelihood: -250880.497425
EM: Round [232] log likelihood: -250880.497248
EM: Round [233] log likelihood: -250880.497073
EM: Round [234] log likelihood: -250880.496902
EM: Round [235] log likelihood: -250880.496733
EM: Round [236] log likelihood: -250880.496567
EM: Round [237] log likelihood: -250880.496403
EM: Round [238] log likelihood: -250880.496242
EM: Round [239] log likelihood: -250880.496083
EM: Round [240] log likelihood: -250880.495927
EM: Round [241] log likelihood: -250880.495773
EM: Round [242] log likelihood: -250880.495622
EM: Round [243] log likelihood: -250880.495473
EM: Round [244] log likelihood: -250880.495326
EM: Round [245] log likelihood: -250880.495181
EM: Round [246] log likelihood: -250880.495039
EM: Round [247] log likelihood: -250880.494898
EM: Round [248] log likelihood: -250880.494760
EM: Round [249] log likelihood: -250880.494624
EM: Round [250] log likelihood: -250880.494490
EM: Round [251] log likelihood: -250880.494358
EM: Round [252] log likelihood: -250880.494228
EM: Round [253] log likelihood: -250880.494099
EM: Round [254] log likelihood: -250880.493973
EM: Round [255] log likelihood: -250880.493848
EM: Round [256] log likelihood: -250880.493725
EM: Round [257] log likelihood: -250880.493604
EM: Round [258] log likelihood: -250880.493485
EM: Round [259] log likelihood: -250880.493367
EM: Round [260] log likelihood: -250880.493252
EM: Round [261] log likelihood: -250880.493137
EM: Round [262] log likelihood: -250880.493025
EM: Round [263] log likelihood: -250880.492914
EM: Round [264] log likelihood: -250880.492804
EM: Round [265] log likelihood: -250880.492696
EM: Round [266] log likelihood: -250880.492590
EM: Round [267] log likelihood: -250880.492485
EM: Round [268] log likelihood: -250880.492381
EM: Round [269] log likelihood: -250880.492279
EM: Round [270] log likelihood: -250880.492179
EM: Round [271] log likelihood: -250880.492079
EM: Stopping iterations at round 271 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -248015.622758
EM: Round [1] log likelihood: -247435.140480
EM: Round [2] log likelihood: -247246.230059
EM: Round [3] log likelihood: -247162.795574
EM: Round [4] log likelihood: -247119.863774
EM: Round [5] log likelihood: -247095.711166
EM: Round [6] log likelihood: -247081.220426
EM: Round [7] log likelihood: -247072.048431
EM: Round [8] log likelihood: -247065.965732
EM: Round [9] log likelihood: -247061.764293
EM: Round [10] log likelihood: -247058.758441
EM: Round [11] log likelihood: -247056.542159
EM: Round [12] log likelihood: -247054.865481
EM: Round [13] log likelihood: -247053.568919
EM: Round [14] log likelihood: -247052.547355
EM: Round [15] log likelihood: -247051.729433
EM: Round [16] log likelihood: -247051.065420
EM: Round [17] log likelihood: -247050.519822
EM: Round [18] log likelihood: -247050.066768
EM: Round [19] log likelihood: -247049.687045
EM: Round [20] log likelihood: -247049.366145
EM: Round [21] log likelihood: -247049.092947
EM: Round [22] log likelihood: -247048.858813
EM: Round [23] log likelihood: -247048.656952
EM: Round [24] log likelihood: -247048.481969
EM: Round [25] log likelihood: -247048.329531
EM: Round [26] log likelihood: -247048.196131
EM: Round [27] log likelihood: -247048.078904
EM: Round [28] log likelihood: -247047.975492
EM: Round [29] log likelihood: -247047.883942
EM: Round [30] log likelihood: -247047.802625
EM: Round [31] log likelihood: -247047.730173
EM: Round [32] log likelihood: -247047.665433
EM: Round [33] log likelihood: -247047.607426
EM: Round [34] log likelihood: -247047.555319
EM: Round [35] log likelihood: -247047.508398
EM: Round [36] log likelihood: -247047.466048
EM: Round [37] log likelihood: -247047.427742
EM: Round [38] log likelihood: -247047.393019
EM: Round [39] log likelihood: -247047.361481
EM: Round [40] log likelihood: -247047.332781
EM: Round [41] log likelihood: -247047.306615
EM: Round [42] log likelihood: -247047.282716
EM: Round [43] log likelihood: -247047.260849
EM: Round [44] log likelihood: -247047.240808
EM: Round [45] log likelihood: -247047.222410
EM: Round [46] log likelihood: -247047.205493
EM: Round [47] log likelihood: -247047.189914
EM: Round [48] log likelihood: -247047.175545
EM: Round [49] log likelihood: -247047.162272
EM: Round [50] log likelihood: -247047.149993
EM: Round [51] log likelihood: -247047.138617
EM: Round [52] log likelihood: -247047.128063
EM: Round [53] log likelihood: -247047.118258
EM: Round [54] log likelihood: -247047.109135
EM: Round [55] log likelihood: -247047.100636
EM: Round [56] log likelihood: -247047.092708
EM: Round [57] log likelihood: -247047.085302
EM: Round [58] log likelihood: -247047.078375
EM: Round [59] log likelihood: -247047.071887
EM: Round [60] log likelihood: -247047.065803
EM: Round [61] log likelihood: -247047.060090
EM: Round [62] log likelihood: -247047.054719
EM: Round [63] log likelihood: -247047.049663
EM: Round [64] log likelihood: -247047.044898
EM: Round [65] log likelihood: -247047.040402
EM: Round [66] log likelihood: -247047.036155
EM: Round [67] log likelihood: -247047.032137
EM: Round [68] log likelihood: -247047.028333
EM: Round [69] log likelihood: -247047.024727
EM: Round [70] log likelihood: -247047.021304
EM: Round [71] log likelihood: -247047.018052
EM: Round [72] log likelihood: -247047.014959
EM: Round [73] log likelihood: -247047.012014
EM: Round [74] log likelihood: -247047.009207
EM: Round [75] log likelihood: -247047.006529
EM: Round [76] log likelihood: -247047.003971
EM: Round [77] log likelihood: -247047.001526
EM: Round [78] log likelihood: -247046.999186
EM: Round [79] log likelihood: -247046.996944
EM: Round [80] log likelihood: -247046.994796
EM: Round [81] log likelihood: -247046.992734
EM: Round [82] log likelihood: -247046.990754
EM: Round [83] log likelihood: -247046.988850
EM: Round [84] log likelihood: -247046.987019
EM: Round [85] log likelihood: -247046.985256
EM: Round [86] log likelihood: -247046.983558
EM: Round [87] log likelihood: -247046.981920
EM: Round [88] log likelihood: -247046.980340
EM: Round [89] log likelihood: -247046.978814
EM: Round [90] log likelihood: -247046.977339
EM: Round [91] log likelihood: -247046.975913
EM: Round [92] log likelihood: -247046.974533
EM: Round [93] log likelihood: -247046.973198
EM: Round [94] log likelihood: -247046.971904
EM: Round [95] log likelihood: -247046.970649
EM: Round [96] log likelihood: -247046.969432
EM: Round [97] log likelihood: -247046.968252
EM: Round [98] log likelihood: -247046.967105
EM: Round [99] log likelihood: -247046.965992
EM: Round [100] log likelihood: -247046.964909
EM: Round [101] log likelihood: -247046.963857
EM: Round [102] log likelihood: -247046.962833
EM: Round [103] log likelihood: -247046.961837
EM: Round [104] log likelihood: -247046.960866
EM: Round [105] log likelihood: -247046.959921
EM: Round [106] log likelihood: -247046.959000
EM: Round [107] log likelihood: -247046.958103
EM: Round [108] log likelihood: -247046.957227
EM: Round [109] log likelihood: -247046.956373
EM: Round [110] log likelihood: -247046.955539
EM: Round [111] log likelihood: -247046.954726
EM: Round [112] log likelihood: -247046.953931
EM: Round [113] log likelihood: -247046.953155
EM: Round [114] log likelihood: -247046.952396
EM: Round [115] log likelihood: -247046.951655
EM: Round [116] log likelihood: -247046.950930
EM: Round [117] log likelihood: -247046.950222
EM: Round [118] log likelihood: -247046.949528
EM: Round [119] log likelihood: -247046.948850
EM: Round [120] log likelihood: -247046.948186
EM: Round [121] log likelihood: -247046.947536
EM: Round [122] log likelihood: -247046.946900
EM: Round [123] log likelihood: -247046.946277
EM: Round [124] log likelihood: -247046.945667
EM: Round [125] log likelihood: -247046.945069
EM: Round [126] log likelihood: -247046.944483
EM: Round [127] log likelihood: -247046.943908
EM: Round [128] log likelihood: -247046.943345
EM: Round [129] log likelihood: -247046.942793
EM: Round [130] log likelihood: -247046.942252
EM: Round [131] log likelihood: -247046.941721
EM: Round [132] log likelihood: -247046.941200
EM: Round [133] log likelihood: -247046.940690
EM: Round [134] log likelihood: -247046.940188
EM: Round [135] log likelihood: -247046.939696
EM: Round [136] log likelihood: -247046.939213
EM: Round [137] log likelihood: -247046.938739
EM: Round [138] log likelihood: -247046.938274
EM: Round [139] log likelihood: -247046.937817
EM: Round [140] log likelihood: -247046.937368
EM: Round [141] log likelihood: -247046.936927
EM: Round [142] log likelihood: -247046.936494
EM: Round [143] log likelihood: -247046.936069
EM: Round [144] log likelihood: -247046.935651
EM: Round [145] log likelihood: -247046.935240
EM: Round [146] log likelihood: -247046.934837
EM: Round [147] log likelihood: -247046.934440
EM: Round [148] log likelihood: -247046.934051
EM: Round [149] log likelihood: -247046.933667
EM: Round [150] log likelihood: -247046.933291
EM: Round [151] log likelihood: -247046.932920
EM: Round [152] log likelihood: -247046.932556
EM: Round [153] log likelihood: -247046.932198
EM: Round [154] log likelihood: -247046.931846
EM: Round [155] log likelihood: -247046.931499
EM: Round [156] log likelihood: -247046.931159
EM: Round [157] log likelihood: -247046.930824
EM: Round [158] log likelihood: -247046.930494
EM: Round [159] log likelihood: -247046.930170
EM: Round [160] log likelihood: -247046.929850
EM: Round [161] log likelihood: -247046.929536
EM: Round [162] log likelihood: -247046.929227
EM: Round [163] log likelihood: -247046.928923
EM: Round [164] log likelihood: -247046.928624
EM: Round [165] log likelihood: -247046.928329
EM: Round [166] log likelihood: -247046.928039
EM: Round [167] log likelihood: -247046.927754
EM: Round [168] log likelihood: -247046.927473
EM: Round [169] log likelihood: -247046.927196
EM: Round [170] log likelihood: -247046.926924
EM: Round [171] log likelihood: -247046.926655
EM: Round [172] log likelihood: -247046.926391
EM: Round [173] log likelihood: -247046.926131
EM: Round [174] log likelihood: -247046.925875
EM: Round [175] log likelihood: -247046.925623
EM: Round [176] log likelihood: -247046.925375
EM: Round [177] log likelihood: -247046.925130
EM: Round [178] log likelihood: -247046.924889
EM: Round [179] log likelihood: -247046.924651
EM: Round [180] log likelihood: -247046.924418
EM: Round [181] log likelihood: -247046.924187
EM: Round [182] log likelihood: -247046.923960
EM: Round [183] log likelihood: -247046.923737
EM: Round [184] log likelihood: -247046.923516
EM: Round [185] log likelihood: -247046.923299
EM: Round [186] log likelihood: -247046.923085
EM: Round [187] log likelihood: -247046.922874
EM: Round [188] log likelihood: -247046.922667
EM: Round [189] log likelihood: -247046.922462
EM: Round [190] log likelihood: -247046.922260
EM: Round [191] log likelihood: -247046.922061
EM: Round [192] log likelihood: -247046.921865
EM: Round [193] log likelihood: -247046.921672
EM: Round [194] log likelihood: -247046.921481
EM: Round [195] log likelihood: -247046.921294
EM: Round [196] log likelihood: -247046.921109
EM: Round [197] log likelihood: -247046.920926
EM: Round [198] log likelihood: -247046.920746
EM: Round [199] log likelihood: -247046.920569
EM: Round [200] log likelihood: -247046.920394
EM: Round [201] log likelihood: -247046.920222
EM: Round [202] log likelihood: -247046.920052
EM: Round [203] log likelihood: -247046.919884
EM: Round [204] log likelihood: -247046.919719
EM: Round [205] log likelihood: -247046.919556
EM: Round [206] log likelihood: -247046.919395
EM: Round [207] log likelihood: -247046.919237
EM: Round [208] log likelihood: -247046.919080
EM: Round [209] log likelihood: -247046.918926
EM: Round [210] log likelihood: -247046.918774
EM: Round [211] log likelihood: -247046.918624
EM: Round [212] log likelihood: -247046.918476
EM: Round [213] log likelihood: -247046.918330
EM: Round [214] log likelihood: -247046.918186
EM: Round [215] log likelihood: -247046.918044
EM: Round [216] log likelihood: -247046.917904
EM: Round [217] log likelihood: -247046.917766
EM: Round [218] log likelihood: -247046.917629
EM: Round [219] log likelihood: -247046.917495
EM: Round [220] log likelihood: -247046.917362
EM: Round [221] log likelihood: -247046.917231
EM: Round [222] log likelihood: -247046.917102
EM: Round [223] log likelihood: -247046.916975
EM: Round [224] log likelihood: -247046.916849
EM: Round [225] log likelihood: -247046.916725
EM: Round [226] log likelihood: -247046.916602
EM: Round [227] log likelihood: -247046.916481
EM: Round [228] log likelihood: -247046.916362
EM: Round [229] log likelihood: -247046.916244
EM: Round [230] log likelihood: -247046.916128
EM: Round [231] log likelihood: -247046.916013
EM: Round [232] log likelihood: -247046.915900
EM: Round [233] log likelihood: -247046.915789
EM: Round [234] log likelihood: -247046.915678
EM: Round [235] log likelihood: -247046.915569
EM: Round [236] log likelihood: -247046.915462
EM: Round [237] log likelihood: -247046.915356
EM: Round [238] log likelihood: -247046.915251
EM: Round [239] log likelihood: -247046.915148
EM: Round [240] log likelihood: -247046.915046
EM: Round [241] log likelihood: -247046.914945
EM: Round [242] log likelihood: -247046.914846
EM: Stopping iterations at round 242 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 258603020 > /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir > /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir --annotate /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir
-done, see /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 870, filtered: 7105)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.dlPvfGouGo/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.dlPvfGouGo/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000239899.3]
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WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000259962.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000269540.1]
WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000247809.9]
WARNING, no entry stored in dbm for [ENSG00000228242.6]
WARNING, no entry stored in dbm for [ENSG00000124549.14]
WARNING, no entry stored in dbm for [ENSG00000232328.3]
WARNING, no entry stored in dbm for [ENSG00000146556.14]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000230091.6]
WARNING, no entry stored in dbm for [ENSG00000213014.3]
WARNING, no entry stored in dbm for [ENSG00000205853.12]
WARNING, no entry stored in dbm for [ENSG00000287084.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000229415.10]
WARNING, no entry stored in dbm for [ENSG00000238040.1]
WARNING, no entry stored in dbm for [ENSG00000205913.7]
WARNING, no entry stored in dbm for [ENSG00000255325.2]
WARNING, no entry stored in dbm for [ENSG00000197989.14]
WARNING, no entry stored in dbm for [ENSG00000230043.1]
WARNING, no entry stored in dbm for [ENSG00000229161.2]
WARNING, no entry stored in dbm for [ENSG00000235275.3]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000230223.8]
WARNING, no entry stored in dbm for [ENSG00000240750.3]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000280310.1]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000287502.1]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000261713.6]
WARNING, no entry stored in dbm for [ENSG00000243818.5]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000266313.2]
WARNING, no entry stored in dbm for [ENSG00000262898.3]
WARNING, no entry stored in dbm for [ENSG00000228948.2]
WARNING, no entry stored in dbm for [ENSG00000230438.7]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000179918.19]
WARNING, no entry stored in dbm for [ENSG00000215515.2]
WARNING, no entry stored in dbm for [ENSG00000108448.22]
WARNING, no entry stored in dbm for [ENSG00000230871.1]
WARNING, no entry stored in dbm for [ENSG00000240342.3]
WARNING, no entry stored in dbm for [ENSG00000236477.1]
WARNING, no entry stored in dbm for [ENSG00000244099.1]
WARNING, no entry stored in dbm for [ENSG00000248755.1]
WARNING, no entry stored in dbm for [ENSG00000241741.1]
WARNING, no entry stored in dbm for [ENSG00000226448.1]
WARNING, no entry stored in dbm for [ENSG00000241157.1]
WARNING, no entry stored in dbm for [ENSG00000232612.1]
WARNING, no entry stored in dbm for [ENSG00000236735.3]
WARNING, no entry stored in dbm for [ENSG00000225404.2]
WARNING, no entry stored in dbm for [ENSG00000223806.8]
WARNING, no entry stored in dbm for [ENSG00000287738.1]
WARNING, no entry stored in dbm for [ENSG00000237169.1]
WARNING, no entry stored in dbm for [ENSG00000226279.2]
WARNING, no entry stored in dbm for [ENSG00000264275.1]
WARNING, no entry stored in dbm for [ENSG00000264978.2]
WARNING, no entry stored in dbm for [ENSG00000241162.3]
WARNING, no entry stored in dbm for [ENSG00000264978.2]
WARNING, no entry stored in dbm for [ENSG00000243103.3]
WARNING, no entry stored in dbm for [ENSG00000264978.2]
WARNING, no entry stored in dbm for [ENSG00000240490.3]
WARNING, no entry stored in dbm for [ENSG00000244710.3]
WARNING, no entry stored in dbm for [ENSG00000275090.1]
WARNING, no entry stored in dbm for [ENSG00000242158.3]
WARNING, no entry stored in dbm for [ENSG00000240160.3]
WARNING, no entry stored in dbm for [ENSG00000242175.3]
WARNING, no entry stored in dbm for [ENSG00000239472.3]
WARNING, no entry stored in dbm for [ENSG00000202392.1]
WARNING, no entry stored in dbm for [ENSG00000202058.1]
WARNING, no entry stored in dbm for [ENSG00000202392.1]
WARNING, no entry stored in dbm for [ENSG00000189089.5]
WARNING, no entry stored in dbm for [ENSG00000256824.1]
WARNING, no entry stored in dbm for [ENSG00000198671.3]
WARNING, no entry stored in dbm for [ENSG00000233951.3]
WARNING, no entry stored in dbm for [ENSG00000234159.1]
WARNING, no entry stored in dbm for [ENSG00000233297.4]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000233038.6]
WARNING, no entry stored in dbm for [ENSG00000204959.4]
WARNING, no entry stored in dbm for [ENSG00000259353.1]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000285115.1]
WARNING, no entry stored in dbm for [ENSG00000286777.1]
WARNING, no entry stored in dbm for [ENSG00000276871.1]
WARNING, no entry stored in dbm for [ENSG00000277739.1]
WARNING, no entry stored in dbm for [ENSG00000275877.1]
WARNING, no entry stored in dbm for [ENSG00000283568.1]
WARNING, no entry stored in dbm for [ENSG00000283274.1]
WARNING, no entry stored in dbm for [ENSG00000255136.3]
WARNING, no entry stored in dbm for [ENSG00000224294.1]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000257150.3]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000234456.8]
WARNING, no entry stored in dbm for [ENSG00000235505.7]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000287878.1]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000225377.6]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000228956.8]
WARNING, no entry stored in dbm for [ENSG00000242559.3]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000257392.1]
WARNING, no entry stored in dbm for [ENSG00000280114.1]
WARNING, no entry stored in dbm for [ENSG00000248015.7]
WARNING, no entry stored in dbm for [ENSG00000259349.2]
WARNING, no entry stored in dbm for [ENSG00000207941.1]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000272690.6]
WARNING, no entry stored in dbm for [ENSG00000223421.1]
WARNING, no entry stored in dbm for [ENSG00000231999.7]
WARNING, no entry stored in dbm for [ENSG00000266830.1]
WARNING, no entry stored in dbm for [ENSG00000214930.2]
WARNING, no entry stored in dbm for [ENSG00000232233.1]
WARNING, no entry stored in dbm for [ENSG00000280402.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000275716.1]
WARNING, no entry stored in dbm for [ENSG00000257219.6]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000254456.6]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000255171.7]
WARNING, no entry stored in dbm for [ENSG00000245526.11]
WARNING, no entry stored in dbm for [ENSG00000182796.14]
WARNING, no entry stored in dbm for [ENSG00000267688.1]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000231770.6]
WARNING, no entry stored in dbm for [ENSG00000223374.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000287878.1]
WARNING, no entry stored in dbm for [ENSG00000237951.1]
WARNING, no entry stored in dbm for [ENSG00000271913.7]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000263883.1]
WARNING, no entry stored in dbm for [ENSG00000271387.1]
WARNING, no entry stored in dbm for [ENSG00000215256.4]
WARNING, no entry stored in dbm for [ENSG00000224794.2]
WARNING, no entry stored in dbm for [ENSG00000259186.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000261117.1]
WARNING, no entry stored in dbm for [ENSG00000219430.2]
WARNING, no entry stored in dbm for [ENSG00000177133.11]
WARNING, no entry stored in dbm for [ENSG00000244692.3]
WARNING, no entry stored in dbm for [ENSG00000225546.6]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000253311.3]
WARNING, no entry stored in dbm for [ENSG00000283415.2]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000280486.2]
WARNING, no entry stored in dbm for [ENSG00000233013.10]
WARNING, no entry stored in dbm for [ENSG00000288074.1]
WARNING, no entry stored in dbm for [ENSG00000243759.1]
WARNING, no entry stored in dbm for [ENSG00000212766.9]
WARNING, no entry stored in dbm for [ENSG00000236114.1]
WARNING, no entry stored in dbm for [ENSG00000264964.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000233975.2]
WARNING, no entry stored in dbm for [ENSG00000234379.1]
WARNING, no entry stored in dbm for [ENSG00000215030.5]
WARNING, no entry stored in dbm for [ENSG00000203987.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000232463.1]
WARNING, no entry stored in dbm for [ENSG00000215030.5]
WARNING, no entry stored in dbm for [ENSG00000287063.1]
WARNING, no entry stored in dbm for [ENSG00000232774.8]
WARNING, no entry stored in dbm for [ENSG00000259133.5]
WARNING, no entry stored in dbm for [ENSG00000288330.1]
WARNING, no entry stored in dbm for [ENSG00000258656.1]
WARNING, no entry stored in dbm for [ENSG00000214195.4]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000220685.3]
WARNING, no entry stored in dbm for [ENSG00000236740.6]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000254641.1]
WARNING, no entry stored in dbm for [ENSG00000280194.1]
WARNING, no entry stored in dbm for [ENSG00000204959.4]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000275140.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000285886.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000279880.1]
WARNING, no entry stored in dbm for [ENSG00000287090.1]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000229203.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000284687.1]
WARNING, no entry stored in dbm for [ENSG00000287860.1]
WARNING, no entry stored in dbm for [ENSG00000286895.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000241406.3]
WARNING, no entry stored in dbm for [ENSG00000255452.1]
WARNING, no entry stored in dbm for [ENSG00000261096.1]
WARNING, no entry stored in dbm for [ENSG00000185641.6]
WARNING, no entry stored in dbm for [ENSG00000258317.1]
WARNING, no entry stored in dbm for [ENSG00000230551.4]
WARNING, no entry stored in dbm for [ENSG00000234537.1]
WARNING, no entry stored in dbm for [ENSG00000205682.2]
WARNING, no entry stored in dbm for [ENSG00000205682.2]
WARNING, no entry stored in dbm for [ENSG00000286970.1]
WARNING, no entry stored in dbm for [ENSG00000233862.7]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000225963.8]
WARNING, no entry stored in dbm for [ENSG00000229689.3]
WARNING, no entry stored in dbm for [ENSG00000168992.4]
WARNING, no entry stored in dbm for [ENSG00000249738.10]
WARNING, no entry stored in dbm for [ENSG00000283041.1]
WARNING, no entry stored in dbm for [ENSG00000283041.1]
WARNING, no entry stored in dbm for [ENSG00000234522.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000131885.17]


	* STAR-Fusion complete.  See output: /tmp/nxf.dlPvfGouGo/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)