-ctat genome lib [/tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.hPu4X30PWS/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary -sample contains 212424680 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir -J /tmp/nxf.hPu4X30PWS/SkinN_FFPE_L07_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.hPu4X30PWS/SkinN_FFPE_L07_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=66666.67/min [20000], rate=63157.89/min [30000], rate=64285.71/min [40000], rate=68571.43/min [50000], rate=69767.44/min [60000], rate=70588.24/min [70000], rate=72413.79/min [80000], rate=73846.15/min [90000], rate=75000.00/min [100000], rate=76923.08/min [110000], rate=78571.43/min [120000], rate=80898.88/min [130000], rate=82105.26/min [140000], rate=85714.29/min [150000], rate=89108.91/min [160000], rate=90566.04/min [170000], rate=91891.89/min [180000], rate=93103.45/min [190000], rate=95000.00/min [200000], rate=96000.00/min [210000], rate=97674.42/min [220000], rate=98507.46/min [230000], rate=100729.93/min [240000], rate=97959.18/min [250000], rate=95541.40/min [260000], rate=93975.90/min [270000], rate=91525.42/min [280000], rate=89361.70/min [290000], rate=87878.79/min [300000], rate=86956.52/min [310000], rate=85714.29/min [320000], rate=84955.75/min [330000], rate=84255.32/min [340000], rate=83606.56/min [350000], rate=83333.33/min [360000], rate=83076.92/min [370000], rate=82835.82/min [380000], rate=82909.09/min [390000], rate=82978.72/min [400000], rate=82758.62/min [410000], rate=82550.34/min [420000], rate=82352.94/min [430000], rate=82165.61/min [440000], rate=81987.58/min [450000], rate=81818.18/min [460000], rate=81899.11/min [470000], rate=81976.74/min [480000], rate=82285.71/min [490000], rate=82584.27/min [500000], rate=83565.46/min [510000], rate=84297.52/min [520000], rate=85013.62/min [530000], rate=85945.95/min [540000], rate=86863.27/min [550000], rate=87533.16/min [560000], rate=88421.05/min [570000], rate=89062.50/min [580000], rate=89460.15/min [590000], rate=89847.72/min [600000], rate=90680.10/min [610000], rate=91271.82/min [620000], rate=91625.62/min [630000], rate=91970.80/min [640000], rate=92530.12/min [650000], rate=93078.76/min [660000], rate=93396.23/min [670000], rate=93925.23/min [680000], rate=94226.33/min [690000], rate=94736.84/min [700000], rate=95022.62/min [710000], rate=95730.34/min [720000], rate=95787.14/min [730000], rate=96263.74/min [740000], rate=96943.23/min [750000], rate=97826.09/min [760000], rate=98275.86/min [770000], rate=98717.95/min [780000], rate=98734.18/min [790000], rate=99163.18/min [800000], rate=99585.06/min [810000], rate=99590.16/min [820000], rate=100000.00/min [830000], rate=100201.21/min [840000], rate=100800.00/min [850000], rate=100990.10/min [860000], rate=101375.25/min [870000], rate=101754.39/min [880000], rate=101538.46/min [890000], rate=101714.29/min [900000], rate=101886.79/min [910000], rate=102056.07/min [920000], rate=102411.87/min [930000], rate=102762.43/min [940000], rate=102919.71/min [950000], rate=103074.14/min [960000], rate=102857.14/min [970000], rate=102826.86/min [980000], rate=102977.23/min [990000], rate=103125.00/min [1000000], rate=103270.22/min [1010000], rate=103412.97/min [1020000], rate=103553.30/min [1030000], rate=103517.59/min [1040000], rate=103826.96/min [1050000], rate=104132.23/min [1060000], rate=104605.26/min [1070000], rate=105073.65/min [1080000], rate=105537.46/min [1090000], rate=105654.28/min [1100000], rate=105939.00/min [1110000], rate=106220.10/min [1120000], rate=106329.11/min [1130000], rate=106436.42/min [1140000], rate=106708.27/min [1150000], rate=106646.06/min [1160000], rate=106748.47/min [1170000], rate=106849.32/min [1180000], rate=106948.64/min [1190000], rate=106886.23/min [1200000], rate=106983.66/min [1210000], rate=106921.94/min [1220000], rate=107017.54/min [1230000], rate=107423.58/min [1240000], rate=107670.04/min [1250000], rate=108069.16/min [1260000], rate=107692.31/min [1270000], rate=107627.12/min [1280000], rate=108016.88/min [1290000], rate=108100.56/min [1300000], rate=108033.24/min [1310000], rate=108115.54/min [1320000], rate=108196.72/min [1330000], rate=108571.43/min [1340000], rate=108502.02/min [1350000], rate=108288.77/min [1360000], rate=108510.64/min [1370000], rate=108730.16/min [1380000], rate=108804.20/min [1390000], rate=108593.75/min [1400000], rate=108667.53/min [1410000], rate=108740.36/min [1420000], rate=108951.41/min [1430000], rate=109021.60/min [1440000], rate=109228.82/min [1450000], rate=109296.48/min [1460000], rate=109226.93/min [1470000], rate=109158.42/min [1480000], rate=109225.09/min [1490000], rate=109290.95/min [1500000], rate=109356.01/min [1510000], rate=109420.29/min [1520000], rate=109352.52/min [1530000], rate=109285.71/min [1540000], rate=109608.54/min [1550000], rate=109799.29/min [1560000], rate=110117.65/min [1570000], rate=110046.73/min [1580000], rate=110104.53/min [1590000], rate=110289.02/min [1600000], rate=110218.14/min [1610000], rate=110526.32/min [1620000], rate=110580.20/min [1630000], rate=110884.35/min [1640000], rate=110686.16/min [1650000], rate=110738.26/min [1660000], rate=110913.14/min [1670000], rate=111086.47/min [1680000], rate=110891.09/min [1690000], rate=111062.43/min [1700000], rate=111353.71/min [1710000], rate=111279.83/min [1720000], rate=111087.19/min [1730000], rate=110897.44/min [1740000], rate=110593.22/min [1750000], rate=110410.09/min [1760000], rate=110229.65/min [1770000], rate=110051.81/min [1780000], rate=110103.09/min [1790000], rate=110380.27/min [1800000], rate=110316.65/min [1810000], rate=110253.81/min [1820000], rate=110526.32/min [1830000], rate=110574.02/min [1840000], rate=110510.51/min [1850000], rate=110557.77/min [1860000], rate=110495.05/min [1870000], rate=109677.42/min [1880000], rate=108985.51/min [1890000], rate=108309.46/min [1900000], rate=107648.73/min [1910000], rate=107002.80/min [1920000], rate=106469.50/min [1930000], rate=106043.96/min [1940000], rate=105530.37/min [1950000], rate=105121.29/min [1960000], rate=104719.50/min [1970000], rate=104416.96/min [1980000], rate=104210.53/min [1990000], rate=104006.97/min [2000000], rate=103896.10/min [2010000], rate=103786.57/min [2020000], rate=103589.74/min [2030000], rate=103571.43/min [2040000], rate=103640.98/min [2050000], rate=103709.95/min [2060000], rate=103865.55/min [2070000], rate=103933.05/min [2080000], rate=104173.62/min [2090000], rate=104239.40/min [2100000], rate=104304.64/min [2110000], rate=104369.33/min [2120000], rate=104091.65/min [2130000], rate=103565.64/min [2140000], rate=103132.53/min [2150000], rate=102707.01/min [2160000], rate=102208.20/min [2170000], rate=101322.96/min [2180000], rate=100306.75/min [2190000], rate=99772.21/min [2200000], rate=99173.55/min [2210000], rate=98955.22/min [2220000], rate=98813.06/min [2230000], rate=98454.75/min [2240000], rate=97603.49/min [2250000], rate=97402.60/min [2260000], rate=97134.67/min [2270000], rate=96664.30/min [2280000], rate=96541.99/min [2290000], rate=96488.76/min [2300000], rate=96436.06/min [2310000], rate=96450.94/min [2320000], rate=96398.89/min [2330000], rate=96347.35/min [2340000], rate=96164.38/min [2350000], rate=96575.34/min [2360000], rate=96853.63/min [2370000], rate=96932.52/min [2380000], rate=97010.87/min [2390000], rate=97088.69/min [2400000], rate=97100.47/min [2410000], rate=96981.89/min [2420000], rate=96929.24/min [2430000], rate=97070.57/min [2440000], rate=97082.23/min [2450000], rate=96583.44/min [2460000], rate=96156.35/min [2470000], rate=95922.33/min [2480000], rate=95752.90/min [2490000], rate=95892.17/min [2500000], rate=95724.31/min [2510000], rate=94776.59/min [2520000], rate=93796.53/min [2530000], rate=92787.29/min [2540000], rate=92307.69/min [2550000], rate=92224.23/min [2560000], rate=92196.88/min [2570000], rate=91949.91/min [2580000], rate=91923.99/min [2590000], rate=91952.66/min [2600000], rate=91981.13/min [2610000], rate=92009.40/min [2620000], rate=92145.37/min [2630000], rate=92388.76/min [2640000], rate=92523.36/min [2650000], rate=92603.38/min [2660000], rate=92521.74/min [2670000], rate=92440.85/min [2680000], rate=92466.94/min [2690000], rate=92492.84/min [2700000], rate=92518.56/min -building interval tree based on /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=66666.67/min [20000], rate=66666.67/min [30000], rate=62068.97/min [40000], rate=61538.46/min [50000], rate=58823.53/min [60000], rate=60000.00/min [70000], rate=60000.00/min [80000], rate=60759.49/min [90000], rate=61363.64/min [100000], rate=63157.89/min [110000], rate=63461.54/min [120000], rate=63716.81/min [130000], rate=64462.81/min [140000], rate=65116.28/min [150000], rate=66176.47/min [160000], rate=66666.67/min [170000], rate=67105.26/min [180000], rate=67924.53/min [190000], rate=68674.70/min [200000], rate=69364.16/min [210000], rate=70786.52/min [220000], rate=71739.13/min [230000], rate=73796.79/min [240000], rate=75000.00/min [250000], rate=75757.58/min [260000], rate=76470.59/min [270000], rate=78260.87/min [280000], rate=78873.24/min [290000], rate=79452.05/min [300000], rate=80357.14/min [310000], rate=81578.95/min [320000], rate=82051.28/min [330000], rate=82845.19/min [340000], rate=83606.56/min [350000], rate=84677.42/min [360000], rate=85714.29/min [370000], rate=85384.62/min [380000], rate=85074.63/min [390000], rate=85090.91/min [400000], rate=85409.25/min [410000], rate=85714.29/min [420000], rate=86006.83/min [430000], rate=86577.18/min [440000], rate=87128.71/min [450000], rate=87662.34/min [460000], rate=88178.91/min [470000], rate=88401.25/min [480000], rate=88888.89/min [490000], rate=89361.70/min [500000], rate=89820.36/min [510000], rate=90265.49/min [520000], rate=90962.10/min [530000], rate=91379.31/min [540000], rate=91784.70/min [550000], rate=92696.63/min [560000], rate=93333.33/min [570000], rate=94736.84/min [580000], rate=96132.60/min [590000], rate=96986.30/min [600000], rate=98630.14/min [610000], rate=99727.52/min [620000], rate=100000.00/min [630000], rate=100800.00/min [640000], rate=100523.56/min [650000], rate=101562.50/min [660000], rate=102857.14/min [670000], rate=104415.58/min [680000], rate=105154.64/min [690000], rate=105882.35/min [700000], rate=106870.23/min [710000], rate=107304.79/min [720000], rate=107462.69/min [730000], rate=108684.86/min [740000], rate=108823.53/min [750000], rate=108958.84/min [760000], rate=108571.43/min [770000], rate=107943.93/min [780000], rate=108584.69/min [790000], rate=109468.82/min [800000], rate=110344.83/min [810000], rate=110706.15/min [820000], rate=111060.95/min [830000], rate=111409.40/min [840000], rate=111504.42/min [850000], rate=112831.86/min [860000], rate=113907.28/min [870000], rate=114725.27/min [880000], rate=114782.61/min [890000], rate=115584.42/min [900000], rate=116630.67/min [910000], rate=117419.35/min [920000], rate=118454.94/min [930000], rate=119486.08/min [940000], rate=119491.53/min [950000], rate=120000.00/min [960000], rate=119750.52/min [970000], rate=120247.93/min [980000], rate=121487.60/min [990000], rate=122474.23/min [1000000], rate=122950.82/min [1010000], rate=123673.47/min [1020000], rate=124137.93/min [1030000], rate=124346.08/min [1040000], rate=124550.90/min [1050000], rate=125248.51/min [1060000], rate=126190.48/min [1070000], rate=127380.95/min [1080000], rate=128316.83/min [1090000], rate=129249.01/min [1100000], rate=129411.76/min [1110000], rate=129320.39/min [1120000], rate=128982.73/min [1130000], rate=127924.53/min [1140000], rate=128330.21/min [1150000], rate=128252.79/min [1160000], rate=129368.03/min [1170000], rate=129281.77/min [1180000], rate=129433.27/min [1190000], rate=129113.92/min [1200000], rate=128571.43/min [1210000], rate=128042.33/min [1220000], rate=128646.75/min [1230000], rate=129701.23/min [1240000], rate=130755.71/min [1250000], rate=131578.95/min [1260000], rate=132631.58/min [1270000], rate=133450.09/min [1280000], rate=134500.88/min [1290000], rate=135314.69/min [1300000], rate=135416.67/min [1310000], rate=135986.16/min [1320000], rate=136082.47/min [1330000], rate=135945.49/min [1340000], rate=136040.61/min [1350000], rate=136593.59/min [1360000], rate=136683.42/min [1370000], rate=136092.72/min [1380000], rate=135515.55/min [1390000], rate=135389.61/min [1400000], rate=135265.70/min [1410000], rate=134928.23/min [1420000], rate=134810.13/min [1430000], rate=135118.11/min [1440000], rate=135000.00/min [1450000], rate=135093.17/min [1460000], rate=134355.83/min [1470000], rate=133636.36/min [1480000], rate=133133.43/min [1490000], rate=132640.95/min [1500000], rate=132158.59/min [1510000], rate=131686.05/min [1520000], rate=131412.10/min [1530000], rate=130955.78/min [1540000], rate=130324.40/min [1550000], rate=130252.10/min [1560000], rate=130000.00/min [1570000], rate=129573.59/min [1580000], rate=129331.51/min [1590000], rate=129268.29/min [1600000], rate=129032.26/min [1610000], rate=128800.00/min [1620000], rate=128571.43/min [1630000], rate=127178.15/min [1640000], rate=124242.42/min [1650000], rate=121472.39/min [1660000], rate=119138.76/min [1670000], rate=117056.07/min [1680000], rate=115331.81/min [1690000], rate=113677.13/min [1700000], rate=113333.33/min [1710000], rate=111886.59/min [1720000], rate=110848.55/min [1730000], rate=109609.29/min [1740000], rate=108074.53/min [1750000], rate=106707.32/min [1760000], rate=105494.51/min [1770000], rate=104322.20/min [1780000], rate=103588.75/min [1790000], rate=103071.02/min [1800000], rate=102272.73/min [1810000], rate=101780.69/min [1820000], rate=101392.76/min [1830000], rate=100826.45/min [1840000], rate=100272.48/min [1850000], rate=100090.17/min [1860000], rate=99553.97/min [1870000], rate=99292.04/min [1880000], rate=98947.37/min [1890000], rate=98694.52/min [1900000], rate=98360.66/min [1910000], rate=98200.51/min [1920000], rate=97959.18/min [1930000], rate=97969.54/min [1940000], rate=97815.13/min [1950000], rate=97826.09/min [1960000], rate=97836.94/min [1970000], rate=98009.95/min [1980000], rate=98263.03/min [1990000], rate=98514.85/min [2000000], rate=98684.21/min [2010000], rate=98852.46/min [2020000], rate=99019.61/min [2030000], rate=99024.39/min [2040000], rate=99270.07/min [2050000], rate=99434.11/min [2060000], rate=99597.10/min [2070000], rate=99599.04/min [2080000], rate=99760.19/min [2090000], rate=99761.34/min [2100000], rate=99762.47/min [2110000], rate=98063.52/min [2120000], rate=97173.41/min [2130000], rate=96598.64/min [2140000], rate=96107.78/min [2150000], rate=94644.17/min [2160000], rate=93170.38/min [2170000], rate=92603.13/min [2180000], rate=92372.88/min [2190000], rate=92081.29/min [2200000], rate=91858.04/min [2210000], rate=91701.24/min [2220000], rate=91546.39/min [2230000], rate=91393.44/min [2240000], rate=91428.57/min [2250000], rate=91339.65/min [2260000], rate=91251.68/min [2270000], rate=91103.68/min [2280000], rate=90897.01/min [2290000], rate=90752.97/min [2300000], rate=90670.17/min [2310000], rate=90766.21/min [2320000], rate=90625.00/min [2330000], rate=90077.32/min [2340000], rate=89655.17/min [2350000], rate=89240.51/min [2360000], rate=88888.89/min [2370000], rate=88487.87/min [2380000], rate=88093.77/min [2390000], rate=87867.65/min [2400000], rate=87591.24/min [2410000], rate=87318.84/min [2420000], rate=87207.21/min [2430000], rate=86734.09/min [2440000], rate=86524.82/min [2450000], rate=85964.91/min [2460000], rate=85170.23/min [2470000], rate=84734.13/min [2480000], rate=83925.55/min [2490000], rate=83000.00/min [2500000], rate=82508.25/min [2510000], rate=82385.12/min [2520000], rate=82442.75/min [2530000], rate=82455.19/min [2540000], rate=82467.53/min [2550000], rate=82479.78/min [2560000], rate=82536.27/min [2570000], rate=82371.79/min [2580000], rate=82472.03/min [2590000], rate=82265.75/min [2600000], rate=82408.87/min [2610000], rate=81775.46/min [2620000], rate=81114.55/min [2630000], rate=80387.16/min [2640000], rate=79878.97/min [2650000], rate=79579.58/min [2660000], rate=79324.06/min [2670000], rate=78916.26/min [2680000], rate=78096.16/min [2690000], rate=78008.70/min [2700000], rate=77922.08/min [2710000], rate=77799.04/min -building interval tree based on /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=85714.29/min [30000], rate=90000.00/min [40000], rate=88888.89/min [50000], rate=90909.09/min [60000], rate=94736.84/min [70000], rate=100000.00/min [80000], rate=106666.67/min [90000], rate=108000.00/min [100000], rate=111111.11/min [110000], rate=108196.72/min [120000], rate=107462.69/min [130000], rate=106849.32/min [140000], rate=106329.11/min [150000], rate=107142.86/min [160000], rate=107865.17/min [170000], rate=108510.64/min [180000], rate=110204.08/min [190000], rate=111764.71/min [200000], rate=112149.53/min [210000], rate=112500.00/min [220000], rate=111864.41/min [230000], rate=107812.50/min [240000], rate=105109.49/min [250000], rate=102739.73/min [260000], rate=101298.70/min [270000], rate=100000.00/min [280000], rate=98823.53/min [290000], rate=97752.81/min [300000], rate=97297.30/min [310000], rate=97382.20/min [320000], rate=96969.70/min [330000], rate=97058.82/min [340000], rate=97142.86/min [350000], rate=97674.42/min [360000], rate=98181.82/min [370000], rate=98666.67/min [380000], rate=99130.43/min [390000], rate=98734.18/min [400000], rate=99173.55/min [410000], rate=99595.14/min [420000], rate=101204.82/min [430000], rate=101976.28/min [440000], rate=103937.01/min [450000], rate=106299.21/min [460000], rate=108235.29/min [470000], rate=109302.33/min [480000], rate=109923.66/min [490000], rate=110526.32/min [500000], rate=111111.11/min [510000], rate=112500.00/min [520000], rate=113043.48/min [530000], rate=114801.44/min [540000], rate=116546.76/min [550000], rate=118705.04/min [560000], rate=120863.31/min [570000], rate=122580.65/min [580000], rate=123404.26/min [590000], rate=124647.89/min [600000], rate=125435.54/min [610000], rate=124914.68/min [620000], rate=122772.28/min [630000], rate=120766.77/min [640000], rate=119254.66/min [650000], rate=117469.88/min [660000], rate=116129.03/min [670000], rate=114857.14/min [680000], rate=114285.71/min [690000], rate=113114.75/min [700000], rate=112299.47/min [710000], rate=111518.32/min [720000], rate=111340.21/min [730000], rate=111167.51/min [740000], rate=111000.00/min [750000], rate=111111.11/min [760000], rate=110948.91/min [770000], rate=110791.37/min [780000], rate=111163.90/min [790000], rate=111529.41/min [800000], rate=111627.91/min [810000], rate=111467.89/min [820000], rate=111564.63/min [830000], rate=111659.19/min [840000], rate=111258.28/min [850000], rate=109677.42/min [860000], rate=108403.36/min [870000], rate=106748.47/min [880000], rate=105811.62/min [890000], rate=105533.60/min [900000], rate=105468.75/min [910000], rate=104000.00/min [920000], rate=102602.23/min [930000], rate=101270.42/min [940000], rate=100355.87/min [950000], rate=99130.43/min [960000], rate=98461.54/min [970000], rate=97979.80/min [980000], rate=97190.08/min [990000], rate=96585.37/min [1000000], rate=96308.19/min [1010000], rate=95133.44/min [1020000], rate=94009.22/min [1030000], rate=93212.67/min [1040000], rate=92444.44/min [1050000], rate=91703.06/min [1060000], rate=91248.21/min [1070000], rate=90295.36/min [1080000], rate=89379.31/min [1090000], rate=88738.13/min [1100000], rate=88590.60/min [1110000], rate=88211.92/min [1120000], rate=87843.14/min [1130000], rate=87596.90/min [1140000], rate=87356.32/min [1150000], rate=86792.45/min [1160000], rate=86459.63/min [1170000], rate=86134.97/min [1180000], rate=86026.73/min [1190000], rate=85920.58/min [1200000], rate=85918.85/min [1210000], rate=85411.76/min [1220000], rate=85215.37/min [1230000], rate=84827.59/min [1240000], rate=84449.49/min [1250000], rate=84459.46/min [1260000], rate=84375.00/min [1270000], rate=84105.96/min [1280000], rate=83751.36/min [1290000], rate=83585.31/min [1300000], rate=83333.33/min [1310000], rate=83086.68/min [1320000], rate=83018.87/min [1330000], rate=82952.18/min [1340000], rate=82886.60/min [1350000], rate=82568.81/min [1360000], rate=82424.24/min [1370000], rate=82447.34/min [1380000], rate=82306.16/min [1390000], rate=82167.49/min [1400000], rate=81951.22/min [1410000], rate=81818.18/min [1420000], rate=81765.83/min [1430000], rate=81636.54/min [1440000], rate=81586.40/min [1450000], rate=81613.51/min [1460000], rate=81564.25/min [1470000], rate=81666.67/min [1480000], rate=81843.32/min [1490000], rate=81943.17/min [1500000], rate=82041.93/min [1510000], rate=82214.16/min [1520000], rate=82310.47/min [1530000], rate=82405.75/min [1540000], rate=81697.61/min [1550000], rate=80310.88/min [1560000], rate=78987.34/min [1570000], rate=77722.77/min [1580000], rate=76637.03/min [1590000], rate=75534.44/min [1600000], rate=74245.94/min [1610000], rate=73237.30/min [1620000], rate=72754.49/min [1630000], rate=72177.12/min [1640000], rate=71201.16/min [1650000], rate=70815.45/min [1660000], rate=69699.09/min [1670000], rate=68724.28/min [1680000], rate=68571.43/min [1690000], rate=68236.88/min [1700000], rate=67326.73/min [1710000], rate=67102.68/min [1720000], rate=66926.07/min [1730000], rate=66795.37/min [1740000], rate=66624.12/min [1750000], rate=66455.70/min [1760000], rate=66415.09/min [1770000], rate=66416.51/min [1780000], rate=66417.91/min [1790000], rate=66378.24/min [1800000], rate=66379.84/min [1810000], rate=66381.42/min [1820000], rate=66302.37/min [1830000], rate=66304.35/min [1840000], rate=66266.51/min [1850000], rate=66308.24/min [1860000], rate=66389.05/min [1870000], rate=66469.19/min [1880000], rate=66509.43/min [1890000], rate=66588.37/min [1900000], rate=66588.79/min [1910000], rate=66473.32/min [1920000], rate=66474.32/min [1930000], rate=66589.99/min [1940000], rate=66704.87/min [1950000], rate=66552.90/min [1960000], rate=66365.69/min [1970000], rate=66255.61/min [1980000], rate=66517.36/min [1990000], rate=66703.91/min [2000000], rate=66518.85/min [2010000], rate=66482.91/min [2020000], rate=66520.31/min [2030000], rate=66593.77/min [2040000], rate=66594.12/min [2050000], rate=66522.44/min [2060000], rate=65605.10/min [2070000], rate=64721.21/min [2080000], rate=64098.61/min [2090000], rate=63525.84/min [2100000], rate=62874.25/min [2110000], rate=62611.28/min [2120000], rate=62383.52/min [2130000], rate=62189.78/min [2140000], rate=62028.99/min [2150000], rate=61811.21/min [2160000], rate=61684.91/min [2170000], rate=61473.09/min [2180000], rate=60865.52/min [2190000], rate=60748.96/min [2200000], rate=60606.06/min [2210000], rate=60520.31/min [2220000], rate=60463.00/min [2230000], rate=60379.06/min [2240000], rate=60323.16/min [2250000], rate=60267.86/min [2260000], rate=60213.14/min [2270000], rate=60185.59/min [2280000], rate=60026.33/min [2290000], rate=59791.12/min [2300000], rate=59792.03/min [2310000], rate=59767.14/min [2320000], rate=59793.81/min [2330000], rate=59820.28/min [2340000], rate=59821.05/min [2350000], rate=59745.76/min [2360000], rate=59772.06/min [2370000], rate=59798.15/min [2380000], rate=59874.21/min [2390000], rate=59924.78/min [2400000], rate=60025.01/min [2410000], rate=60049.83/min [2420000], rate=60149.13/min [2430000], rate=60049.42/min [2440000], rate=60073.86/min [2450000], rate=60147.30/min [2460000], rate=60220.32/min [2470000], rate=60366.60/min [2480000], rate=60438.67/min [2490000], rate=60510.33/min [2500000], rate=60606.06/min [2510000], rate=60725.81/min [2520000], rate=60869.57/min [2530000], rate=60988.35/min [2540000], rate=60960.00/min [2550000], rate=60786.65/min [2560000], rate=60639.56/min [2570000], rate=60518.05/min [2580000], rate=60374.41/min [2590000], rate=60069.58/min [2600000], rate=59428.57/min [2610000], rate=58827.95/min [2620000], rate=58373.56/min [2630000], rate=58207.30/min [2640000], rate=58128.44/min [2650000], rate=58050.38/min [2660000], rate=57973.12/min [2670000], rate=57896.64/min [2680000], rate=57862.54/min [2690000], rate=57787.33/min [2700000], rate=57733.43/min -building interval tree based on /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=200000.00/min [20000], rate=200000.00/min [30000], rate=94736.84/min [40000], rate=88888.89/min [50000], rate=93750.00/min [60000], rate=109090.91/min [70000], rate=116666.67/min [80000], rate=120000.00/min [90000], rate=122727.27/min [100000], rate=120000.00/min [110000], rate=115789.47/min [120000], rate=118032.79/min [130000], rate=127868.85/min [140000], rate=137704.92/min [150000], rate=147540.98/min [160000], rate=157377.05/min [170000], rate=167213.11/min [180000], rate=174193.55/min [190000], rate=183870.97/min [200000], rate=190476.19/min [210000], rate=190909.09/min [220000], rate=197014.93/min [230000], rate=197142.86/min [240000], rate=194594.59/min [250000], rate=197368.42/min [260000], rate=205263.16/min [270000], rate=210389.61/min [280000], rate=218181.82/min [290000], rate=225974.03/min [300000], rate=219512.20/min [310000], rate=218823.53/min [320000], rate=208695.65/min [330000], rate=200000.00/min [340000], rate=201980.20/min [350000], rate=201923.08/min [360000], rate=207692.31/min [370000], rate=205555.56/min [380000], rate=205405.41/min [390000], rate=201724.14/min [400000], rate=195121.95/min [410000], rate=193700.79/min [420000], rate=196875.00/min [430000], rate=201562.50/min [440000], rate=206250.00/min [450000], rate=209302.33/min [460000], rate=213953.49/min [470000], rate=218604.65/min [480000], rate=223255.81/min [490000], rate=227906.98/min [500000], rate=227272.73/min [510000], rate=228358.21/min [520000], rate=227737.23/min [530000], rate=227142.86/min [540000], rate=228169.01/min [550000], rate=232394.37/min [560000], rate=234965.03/min [570000], rate=239160.84/min [580000], rate=243356.64/min [590000], rate=239189.19/min [600000], rate=236842.11/min [610000], rate=237662.34/min [620000], rate=233962.26/min [630000], rate=226347.31/min [640000], rate=227218.93/min [650000], rate=225433.53/min [660000], rate=228901.73/min [670000], rate=228409.09/min [680000], rate=226666.67/min [690000], rate=227472.53/min [700000], rate=224598.93/min [710000], rate=217346.94/min [720000], rate=218181.82/min [730000], rate=221212.12/min [740000], rate=224242.42/min [750000], rate=227272.73/min [760000], rate=230303.03/min [770000], rate=232160.80/min [780000], rate=232835.82/min [790000], rate=233497.54/min [800000], rate=234146.34/min [810000], rate=233653.85/min [820000], rate=233175.36/min [830000], rate=234905.66/min [840000], rate=234418.60/min [850000], rate=233944.95/min [860000], rate=233484.16/min [870000], rate=228947.37/min [880000], rate=223728.81/min [890000], rate=223430.96/min [900000], rate=224066.39/min [910000], rate=225619.83/min [920000], rate=225306.12/min [930000], rate=224096.39/min [940000], rate=223809.52/min [950000], rate=220077.22/min [960000], rate=217358.49/min [970000], rate=218796.99/min [980000], rate=221052.63/min [990000], rate=223308.27/min [1000000], rate=225563.91/min [1010000], rate=227819.55/min [1020000], rate=229213.48/min [1030000], rate=228888.89/min [1040000], rate=230258.30/min [1050000], rate=229927.01/min [1060000], rate=229602.89/min [1070000], rate=230107.53/min [1080000], rate=227368.42/min [1090000], rate=215841.58/min [1100000], rate=204968.94/min [1110000], rate=196460.18/min [1120000], rate=188764.04/min [1130000], rate=182258.06/min [1140000], rate=175835.48/min [1150000], rate=169950.74/min [1160000], rate=164150.94/min [1170000], rate=159183.67/min [1180000], rate=154923.41/min [1190000], rate=149372.38/min [1200000], rate=145161.29/min [1210000], rate=140425.53/min [1220000], rate=134806.63/min [1230000], rate=130619.47/min [1240000], rate=126315.79/min [1250000], rate=120967.74/min [1260000], rate=116666.67/min [1270000], rate=113224.37/min [1280000], rate=109871.24/min [1290000], rate=106172.84/min [1300000], rate=103174.60/min [1310000], rate=100640.20/min [1320000], rate=98019.80/min [1330000], rate=96493.35/min [1340000], rate=95147.93/min [1350000], rate=93967.52/min [1360000], rate=92832.76/min [1370000], rate=91843.58/min [1380000], rate=90789.47/min [1390000], rate=89967.64/min [1400000], rate=89266.74/min [1410000], rate=88679.25/min [1420000], rate=88016.53/min [1430000], rate=87372.71/min [1440000], rate=86746.99/min [1450000], rate=86223.98/min [1460000], rate=85882.35/min [1470000], rate=85217.39/min [1480000], rate=84813.75/min [1490000], rate=84419.26/min [1500000], rate=84033.61/min [1510000], rate=83502.30/min [1520000], rate=83135.82/min [1530000], rate=82851.99/min [1540000], rate=82573.73/min [1550000], rate=82446.81/min [1560000], rate=82321.90/min [1570000], rate=82198.95/min [1580000], rate=82149.05/min [1590000], rate=82029.23/min [1600000], rate=82051.28/min [1610000], rate=82003.40/min [1620000], rate=81956.16/min [1630000], rate=81978.21/min [1640000], rate=82000.00/min [1650000], rate=82021.54/min [1660000], rate=82110.47/min [1670000], rate=82198.52/min [1680000], rate=82218.60/min [1690000], rate=82305.19/min [1700000], rate=82390.95/min [1710000], rate=82409.64/min [1720000], rate=82034.98/min [1730000], rate=81411.76/min [1740000], rate=80930.23/min [1750000], rate=80645.16/min [1760000], rate=80304.18/min [1770000], rate=80090.50/min [1780000], rate=79464.29/min [1790000], rate=78623.72/min [1800000], rate=77922.08/min [1810000], rate=77185.50/min [1820000], rate=76256.98/min [1830000], rate=75205.48/min [1840000], rate=74393.53/min [1850000], rate=74247.49/min [1860000], rate=74350.43/min [1870000], rate=74304.64/min [1880000], rate=74357.28/min [1890000], rate=74360.66/min [1900000], rate=74363.99/min [1910000], rate=74463.94/min [1920000], rate=74466.71/min [1930000], rate=74517.37/min [1940000], rate=74615.38/min [1950000], rate=74664.96/min [1960000], rate=74809.16/min [1970000], rate=74904.94/min [1980000], rate=75047.38/min [1990000], rate=74531.84/min [2000000], rate=73800.74/min [2010000], rate=73002.42/min [2020000], rate=72358.21/min [2030000], rate=72028.39/min [2040000], rate=71411.90/min [2050000], rate=70527.52/min [2060000], rate=70068.03/min [2070000], rate=69346.73/min [2080000], rate=68684.65/min [2090000], rate=68337.87/min [2100000], rate=67778.38/min [2110000], rate=67019.59/min [2120000], rate=65600.83/min [2130000], rate=65038.17/min [2140000], rate=64039.90/min [2150000], rate=63861.39/min [2160000], rate=63312.16/min [2170000], rate=62356.32/min [2180000], rate=62049.34/min [2190000], rate=61488.07/min [2200000], rate=60773.48/min [2210000], rate=59891.60/min [2220000], rate=59305.43/min [2230000], rate=58607.10/min [2240000], rate=58131.49/min [2250000], rate=58089.50/min [2260000], rate=58097.69/min [2270000], rate=58056.27/min [2280000], rate=57819.10/min [2290000], rate=57634.23/min [2300000], rate=57024.79/min [2310000], rate=56479.22/min [2320000], rate=55858.75/min [2330000], rate=55322.52/min [2340000], rate=54865.18/min [2350000], rate=54672.35/min [2360000], rate=54714.06/min [2370000], rate=54755.49/min [2380000], rate=54817.66/min [2390000], rate=54900.46/min [2400000], rate=54982.82/min [2410000], rate=55064.74/min [2420000], rate=54958.36/min [2430000], rate=54915.25/min [2440000], rate=55016.91/min [2450000], rate=55118.11/min [2460000], rate=55198.20/min [2470000], rate=55216.10/min [2480000], rate=54625.55/min [2490000], rate=54091.24/min [2500000], rate=53956.83/min [2510000], rate=53670.71/min [2520000], rate=53108.54/min [2530000], rate=52653.49/min [2540000], rate=52263.37/min [2550000], rate=52236.26/min [2560000], rate=52227.13/min [2570000], rate=52235.77/min [2580000], rate=52051.11/min [2590000], rate=52060.30/min [2600000], rate=52052.05/min [2610000], rate=51871.48/min [2620000], rate=51642.58/min [2630000], rate=51283.72/min [2640000], rate=51262.14/min [2650000], rate=51158.30/min [2660000], rate=51219.51/min [2670000], rate=51264.00/min [2680000], rate=51324.61/min [2690000], rate=51384.91/min [2700000], rate=51428.57/min [2710000], rate=51504.59/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir --filt_file /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 12000000.00 reads per min processed... 9000000.00 reads per min processed... 8000000.00 reads per min processed... 10000000.00 reads per min processed... 9000000.00 reads per min processed... 10500000.00 reads per min processed... 9600000.00 reads per min processed... 9000000.00 reads per min processed... 10000000.00 reads per min processed... 8250000.00 reads per min processed... 8000000.00 reads per min processed... 7090909.09 reads per min processed... 7000000.00 reads per min processed... 6428571.43 reads per min processed... 6400000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5700000.00 reads per min processed... 5714285.71 reads per min processed... 5478260.87 reads per min processed... 5500000.00 reads per min processed... 5307692.31 reads per min processed... 5333333.33 reads per min processed... 5172413.79 reads per min processed... 5200000.00 reads per min processed... 5062500.00 reads per min processed... 4941176.47 reads per min processed... 4833333.33 reads per min processed... 4736842.11 reads per min processed... 4769230.77 reads per min processed... 4682926.83 reads per min processed... 4604651.16 reads per min processed... 4533333.33 reads per min processed... 4468085.11 reads per min processed... 4408163.27 reads per min processed... 4440000.00 reads per min processed... 4384615.38 reads per min processed... 4415094.34 reads per min processed... 4444444.44 reads per min processed... 4472727.27 reads per min processed... 4500000.00 reads per min processed... 4448275.86 reads per min processed... 4474576.27 reads per min processed... 4500000.00 reads per min processed... 4524590.16 reads per min processed... 4476190.48 reads per min processed... 4500000.00 reads per min processed... 4523076.92 reads per min processed... 4477611.94 reads per min processed... 4500000.00 reads per min processed... 4588235.29 reads per min processed... 4608695.65 reads per min processed... 4628571.43 reads per min processed... 4714285.71 reads per min processed... 4732394.37 reads per min processed... 4750000.00 reads per min processed... 4833333.33 reads per min processed... 4783783.78 reads per min processed... 4736842.11 reads per min processed... 4753246.75 reads per min processed... 4708860.76 reads per min processed... 4725000.00 reads per min processed... 4682926.83 reads per min processed... 4698795.18 reads per min processed... 4658823.53 reads per min processed... 4674418.60 reads per min processed... 4689655.17 reads per min processed... 4651685.39 reads per min processed... 4615384.62 reads per min processed... 4630434.78 reads per min processed... 4645161.29 reads per min processed... 4659574.47 reads per min processed... 4673684.21 reads per min processed... 4639175.26 reads per min processed... 4606060.61 reads per min processed... 4574257.43 reads per min processed... 4543689.32 reads per min processed... 4514285.71 reads per min processed... 4485981.31 reads per min processed... 4500000.00 reads per min processed... 4472727.27 reads per min processed... 4446428.57 reads per min processed... 4421052.63 reads per min processed... 4396551.72 reads per min processed... 4410256.41 reads per min processed... 4386554.62 reads per min processed... 4400000.00 reads per min processed... 4377049.18 reads per min processed... 4390243.90 reads per min processed... 4368000.00 reads per min processed... 4380952.38 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.hPu4X30PWS/SkinN_FFPE_L07_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -113767.584415 EM: Round [1] log likelihood: -113603.416277 EM: Round [2] log likelihood: -113538.485116 EM: Round [3] log likelihood: -113506.356707 EM: Round [4] log likelihood: -113488.986545 EM: Round [5] log likelihood: -113479.151021 EM: Round [6] log likelihood: -113473.356939 EM: Round [7] log likelihood: -113469.797488 EM: Round [8] log likelihood: -113467.514790 EM: Round [9] log likelihood: -113465.989662 EM: Round [10] log likelihood: -113464.932382 EM: Round [11] log likelihood: -113464.175561 EM: Round [12] log likelihood: -113463.618827 EM: Round [13] log likelihood: -113463.199735 EM: Round [14] log likelihood: -113462.878053 EM: Round [15] log likelihood: -113462.627019 EM: Round [16] log likelihood: -113462.428316 EM: Round [17] log likelihood: -113462.269085 EM: Round [18] log likelihood: -113462.140101 EM: Round [19] log likelihood: -113462.034616 EM: Round [20] log likelihood: -113461.947608 EM: Round [21] log likelihood: -113461.875286 EM: Round [22] log likelihood: -113461.814748 EM: Round [23] log likelihood: -113461.763747 EM: Round [24] log likelihood: -113461.720525 EM: Round [25] log likelihood: -113461.683691 EM: Round [26] log likelihood: -113461.652136 EM: Round [27] log likelihood: -113461.624969 EM: Round [28] log likelihood: -113461.601470 EM: Round [29] log likelihood: -113461.581049 EM: Round [30] log likelihood: -113461.563226 EM: Round [31] log likelihood: -113461.547602 EM: Round [32] log likelihood: -113461.533849 EM: Round [33] log likelihood: -113461.521693 EM: Round [34] log likelihood: -113461.510904 EM: Round [35] log likelihood: -113461.501291 EM: Round [36] log likelihood: -113461.492692 EM: Round [37] log likelihood: -113461.484970 EM: Round [38] log likelihood: -113461.478010 EM: Round [39] log likelihood: -113461.471712 EM: Round [40] log likelihood: -113461.465993 EM: Round [41] log likelihood: -113461.460782 EM: Round [42] log likelihood: -113461.456016 EM: Round [43] log likelihood: -113461.451643 EM: Round [44] log likelihood: -113461.447617 EM: Round [45] log likelihood: -113461.443899 EM: Round [46] log likelihood: -113461.440455 EM: Round [47] log likelihood: -113461.437256 EM: Round [48] log likelihood: -113461.434276 EM: Round [49] log likelihood: -113461.431492 EM: Round [50] log likelihood: -113461.428885 EM: Round [51] log likelihood: -113461.426438 EM: Round [52] log likelihood: -113461.424136 EM: Round [53] log likelihood: -113461.421966 EM: Round [54] log likelihood: -113461.419917 EM: Round [55] log likelihood: -113461.417977 EM: Round [56] log likelihood: -113461.416138 EM: Round [57] log likelihood: -113461.414392 EM: Round [58] log likelihood: -113461.412732 EM: Round [59] log likelihood: -113461.411150 EM: Round [60] log likelihood: -113461.409643 EM: Round [61] log likelihood: -113461.408203 EM: Round [62] log likelihood: -113461.406827 EM: Round [63] log likelihood: -113461.405511 EM: Round [64] log likelihood: -113461.404251 EM: Round [65] log likelihood: -113461.403042 EM: Round [66] log likelihood: -113461.401883 EM: Round [67] log likelihood: -113461.400771 EM: Round [68] log likelihood: -113461.399702 EM: Round [69] log likelihood: -113461.398675 EM: Round [70] log likelihood: -113461.397686 EM: Round [71] log likelihood: -113461.396735 EM: Round [72] log likelihood: -113461.395820 EM: Round [73] log likelihood: -113461.394938 EM: Round [74] log likelihood: -113461.394088 EM: Round [75] log likelihood: -113461.393269 EM: Round [76] log likelihood: -113461.392478 EM: Round [77] log likelihood: -113461.391716 EM: Round [78] log likelihood: -113461.390980 EM: Round [79] log likelihood: -113461.390270 EM: Round [80] log likelihood: -113461.389585 EM: Round [81] log likelihood: -113461.388922 EM: Round [82] log likelihood: -113461.388283 EM: Round [83] log likelihood: -113461.387665 EM: Round [84] log likelihood: -113461.387068 EM: Round [85] log likelihood: -113461.386490 EM: Round [86] log likelihood: -113461.385932 EM: Round [87] log likelihood: -113461.385393 EM: Round [88] log likelihood: -113461.384871 EM: Round [89] log likelihood: -113461.384367 EM: Round [90] log likelihood: -113461.383879 EM: Round [91] log likelihood: -113461.383406 EM: Round [92] log likelihood: -113461.382950 EM: Round [93] log likelihood: -113461.382508 EM: Round [94] log likelihood: -113461.382080 EM: Round [95] log likelihood: -113461.381666 EM: Round [96] log likelihood: -113461.381266 EM: Round [97] log likelihood: -113461.380878 EM: Round [98] log likelihood: -113461.380503 EM: Round [99] log likelihood: -113461.380139 EM: Round [100] log likelihood: -113461.379787 EM: Round [101] log likelihood: -113461.379447 EM: Round [102] log likelihood: -113461.379117 EM: Round [103] log likelihood: -113461.378798 EM: Round [104] log likelihood: -113461.378488 EM: Round [105] log likelihood: -113461.378189 EM: Round [106] log likelihood: -113461.377899 EM: Round [107] log likelihood: -113461.377617 EM: Round [108] log likelihood: -113461.377345 EM: Round [109] log likelihood: -113461.377081 EM: Round [110] log likelihood: -113461.376826 EM: Round [111] log likelihood: -113461.376578 EM: Round [112] log likelihood: -113461.376339 EM: Round [113] log likelihood: -113461.376106 EM: Round [114] log likelihood: -113461.375881 EM: Round [115] log likelihood: -113461.375663 EM: Round [116] log likelihood: -113461.375451 EM: Round [117] log likelihood: -113461.375246 EM: Round [118] log likelihood: -113461.375047 EM: Round [119] log likelihood: -113461.374855 EM: Round [120] log likelihood: -113461.374668 EM: Round [121] log likelihood: -113461.374487 EM: Round [122] log likelihood: -113461.374312 EM: Round [123] log likelihood: -113461.374142 EM: Round [124] log likelihood: -113461.373977 EM: Round [125] log likelihood: -113461.373817 EM: Round [126] log likelihood: -113461.373662 EM: Round [127] log likelihood: -113461.373511 EM: Round [128] log likelihood: -113461.373365 EM: Round [129] log likelihood: -113461.373224 EM: Round [130] log likelihood: -113461.373086 EM: Round [131] log likelihood: -113461.372953 EM: Round [132] log likelihood: -113461.372824 EM: Round [133] log likelihood: -113461.372699 EM: Round [134] log likelihood: -113461.372577 EM: Round [135] log likelihood: -113461.372459 EM: Round [136] log likelihood: -113461.372345 EM: Round [137] log likelihood: -113461.372234 EM: Round [138] log likelihood: -113461.372126 EM: Round [139] log likelihood: -113461.372021 EM: Round [140] log likelihood: -113461.371920 EM: Round [141] log likelihood: -113461.371821 EM: Stopping iterations at round 141 due to insufficient improvement in likelihood. EM: Starting log likelihood: -113607.902682 EM: Round [1] log likelihood: -113463.722970 EM: Round [2] log likelihood: -113408.598770 EM: Round [3] log likelihood: -113382.036054 EM: Round [4] log likelihood: -113367.956261 EM: Round [5] log likelihood: -113360.110022 EM: Round [6] log likelihood: -113355.555613 EM: Round [7] log likelihood: -113352.799357 EM: Round [8] log likelihood: -113351.059129 EM: Round [9] log likelihood: -113349.914985 EM: Round [10] log likelihood: -113349.134566 EM: Round [11] log likelihood: -113348.584775 EM: Round [12] log likelihood: -113348.186542 EM: Round [13] log likelihood: -113347.891163 EM: Round [14] log likelihood: -113347.667598 EM: Round [15] log likelihood: -113347.495434 EM: Round [16] log likelihood: -113347.360862 EM: Round [17] log likelihood: -113347.254307 EM: Round [18] log likelihood: -113347.168979 EM: Round [19] log likelihood: -113347.099969 EM: Round [20] log likelihood: -113347.043665 EM: Round [21] log likelihood: -113346.997370 EM: Round [22] log likelihood: -113346.959039 EM: Round [23] log likelihood: -113346.927105 EM: Round [24] log likelihood: -113346.900351 EM: Round [25] log likelihood: -113346.877823 EM: Round [26] log likelihood: -113346.858764 EM: Round [27] log likelihood: -113346.842573 EM: Round [28] log likelihood: -113346.828763 EM: Round [29] log likelihood: -113346.816942 EM: Round [30] log likelihood: -113346.806787 EM: Round [31] log likelihood: -113346.798036 EM: Round [32] log likelihood: -113346.790470 EM: Round [33] log likelihood: -113346.783911 EM: Round [34] log likelihood: -113346.778207 EM: Round [35] log likelihood: -113346.773232 EM: Round [36] log likelihood: -113346.768883 EM: Round [37] log likelihood: -113346.765069 EM: Round [38] log likelihood: -113346.761715 EM: Round [39] log likelihood: -113346.758759 EM: Round [40] log likelihood: -113346.756146 EM: Round [41] log likelihood: -113346.753830 EM: Round [42] log likelihood: -113346.751772 EM: Round [43] log likelihood: -113346.749939 EM: Round [44] log likelihood: -113346.748300 EM: Round [45] log likelihood: -113346.746832 EM: Round [46] log likelihood: -113346.745514 EM: Round [47] log likelihood: -113346.744327 EM: Round [48] log likelihood: -113346.743254 EM: Round [49] log likelihood: -113346.742283 EM: Round [50] log likelihood: -113346.741401 EM: Round [51] log likelihood: -113346.740599 EM: Round [52] log likelihood: -113346.739866 EM: Round [53] log likelihood: -113346.739195 EM: Round [54] log likelihood: -113346.738580 EM: Round [55] log likelihood: -113346.738013 EM: Round [56] log likelihood: -113346.737491 EM: Round [57] log likelihood: -113346.737008 EM: Round [58] log likelihood: -113346.736560 EM: Round [59] log likelihood: -113346.736145 EM: Round [60] log likelihood: -113346.735757 EM: Round [61] log likelihood: -113346.735396 EM: Round [62] log likelihood: -113346.735058 EM: Round [63] log likelihood: -113346.734741 EM: Round [64] log likelihood: -113346.734444 EM: Round [65] log likelihood: -113346.734164 EM: Round [66] log likelihood: -113346.733900 EM: Round [67] log likelihood: -113346.733651 EM: Round [68] log likelihood: -113346.733415 EM: Round [69] log likelihood: -113346.733191 EM: Round [70] log likelihood: -113346.732980 EM: Round [71] log likelihood: -113346.732778 EM: Round [72] log likelihood: -113346.732587 EM: Round [73] log likelihood: -113346.732404 EM: Round [74] log likelihood: -113346.732230 EM: Round [75] log likelihood: -113346.732064 EM: Round [76] log likelihood: -113346.731905 EM: Round [77] log likelihood: -113346.731752 EM: Round [78] log likelihood: -113346.731607 EM: Round [79] log likelihood: -113346.731467 EM: Round [80] log likelihood: -113346.731333 EM: Round [81] log likelihood: -113346.731204 EM: Round [82] log likelihood: -113346.731080 EM: Round [83] log likelihood: -113346.730961 EM: Round [84] log likelihood: -113346.730846 EM: Round [85] log likelihood: -113346.730735 EM: Round [86] log likelihood: -113346.730629 EM: Round [87] log likelihood: -113346.730526 EM: Round [88] log likelihood: -113346.730427 EM: Stopping iterations at round 88 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 212424680 > /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir > /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir --annotate /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir -done, see /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 786, filtered: 6396) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.hPu4X30PWS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.hPu4X30PWS/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000241529.3] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000215458.8] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000226823.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000241175.3] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000249375.8] WARNING, no entry stored in dbm for [ENSG00000259683.1] WARNING, no entry stored in dbm for [ENSG00000228754.1] WARNING, no entry stored in dbm for [ENSG00000239397.1] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000287516.1] WARNING, no entry stored in dbm for [ENSG00000227220.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000287243.2] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000282890.1] WARNING, no entry stored in dbm for [ENSG00000068781.21] WARNING, no entry stored in dbm for [ENSG00000287985.1] WARNING, no entry stored in dbm for [ENSG00000250145.1] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000226051.8] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000233554.6] WARNING, no entry stored in dbm for [ENSG00000251591.2] WARNING, no entry stored in dbm for [ENSG00000201749.1] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000229036.7] WARNING, no entry stored in dbm for [ENSG00000249700.9] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000189136.9] WARNING, no entry stored in dbm for [ENSG00000259683.1] WARNING, no entry stored in dbm for [ENSG00000189136.9] WARNING, no entry stored in dbm for [ENSG00000259683.1] WARNING, no entry stored in dbm for [ENSG00000170919.16] WARNING, no entry stored in dbm for [ENSG00000232600.3] WARNING, no entry stored in dbm for [ENSG00000260848.2] WARNING, no entry stored in dbm for [ENSG00000213071.11] WARNING, no entry stored in dbm for [ENSG00000263873.1] WARNING, no entry stored in dbm for [ENSG00000259421.1] WARNING, no entry stored in dbm for [ENSG00000287941.1] WARNING, no entry stored in dbm for [ENSG00000241316.8] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000244502.2] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000279738.1] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000242082.2] WARNING, no entry stored in dbm for [ENSG00000224186.8] WARNING, no entry stored in dbm for [ENSG00000224081.9] WARNING, no entry stored in dbm for [ENSG00000228948.2] WARNING, no entry stored in dbm for [ENSG00000226419.8] WARNING, no entry stored in dbm for [ENSG00000269904.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000259278.2] WARNING, no entry stored in dbm for [ENSG00000228956.8] WARNING, no entry stored in dbm for [ENSG00000217929.4] WARNING, no entry stored in dbm for [ENSG00000240087.3] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000236549.1] WARNING, no entry stored in dbm for [ENSG00000230037.1] WARNING, no entry stored in dbm for [ENSG00000244392.3] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000266828.2] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000240183.3] WARNING, no entry stored in dbm for [ENSG00000202058.1] WARNING, no entry stored in dbm for [ENSG00000202406.1] WARNING, no entry stored in dbm for [ENSG00000213423.4] WARNING, no entry stored in dbm for [ENSG00000252574.2] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000287356.1] WARNING, no entry stored in dbm for [ENSG00000277270.2] WARNING, no entry stored in dbm for [ENSG00000250116.2] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000239224.3] WARNING, no entry stored in dbm for [ENSG00000236432.8] WARNING, no entry stored in dbm for [ENSG00000228546.2] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000253392.3] WARNING, no entry stored in dbm for [ENSG00000247828.8] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000285930.1] WARNING, no entry stored in dbm for [ENSG00000237266.2] WARNING, no entry stored in dbm for [ENSG00000226949.1] WARNING, no entry stored in dbm for [ENSG00000244479.7] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000273068.1] WARNING, no entry stored in dbm for [ENSG00000260075.1] WARNING, no entry stored in dbm for [ENSG00000214293.9] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000288557.1] WARNING, no entry stored in dbm for [ENSG00000177406.5] WARNING, no entry stored in dbm for [ENSG00000236859.7] WARNING, no entry stored in dbm for [ENSG00000262039.1] WARNING, no entry stored in dbm for [ENSG00000212978.6] WARNING, no entry stored in dbm for [ENSG00000249747.1] WARNING, no entry stored in dbm for [ENSG00000235110.5] WARNING, no entry stored in dbm for [ENSG00000270504.1] WARNING, no entry stored in dbm for [ENSG00000240677.1] WARNING, no entry stored in dbm for [ENSG00000255177.2] WARNING, no entry stored in dbm for [ENSG00000284634.1] WARNING, no entry stored in dbm for [ENSG00000264697.1] WARNING, no entry stored in dbm for [ENSG00000269779.1] WARNING, no entry stored in dbm for [ENSG00000269779.1] WARNING, no entry stored in dbm for [ENSG00000249867.6] WARNING, no entry stored in dbm for [ENSG00000236753.7] WARNING, no entry stored in dbm for [ENSG00000230068.2] WARNING, no entry stored in dbm for [ENSG00000236172.7] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000233673.7] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000272690.6] WARNING, no entry stored in dbm for [ENSG00000270442.1] WARNING, no entry stored in dbm for [ENSG00000228109.1] WARNING, no entry stored in dbm for [ENSG00000269292.1] WARNING, no entry stored in dbm for [ENSG00000250189.2] WARNING, no entry stored in dbm for [ENSG00000251034.2] WARNING, no entry stored in dbm for [ENSG00000249383.2] WARNING, no entry stored in dbm for [ENSG00000267519.6] WARNING, no entry stored in dbm for [ENSG00000247675.7] WARNING, no entry stored in dbm for [ENSG00000250868.4] WARNING, no entry stored in dbm for [ENSG00000257139.1] WARNING, no entry stored in dbm for [ENSG00000250252.2] WARNING, no entry stored in dbm for [ENSG00000268532.1] WARNING, no entry stored in dbm for [ENSG00000244649.5] WARNING, no entry stored in dbm for [ENSG00000261008.7] WARNING, no entry stored in dbm for [ENSG00000255171.7] WARNING, no entry stored in dbm for [ENSG00000250634.6] WARNING, no entry stored in dbm for [ENSG00000228794.10] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000241135.6] WARNING, no entry stored in dbm for [ENSG00000228221.6] WARNING, no entry stored in dbm for [ENSG00000231574.6] WARNING, no entry stored in dbm for [ENSG00000267727.1] WARNING, no entry stored in dbm for [ENSG00000258120.2] WARNING, no entry stored in dbm for [ENSG00000251562.8] WARNING, no entry stored in dbm for [ENSG00000268580.1] WARNING, no entry stored in dbm for [ENSG00000266066.1] WARNING, no entry stored in dbm for [ENSG00000234512.1] WARNING, no entry stored in dbm for [ENSG00000237978.6] WARNING, no entry stored in dbm for [ENSG00000287352.1] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000255545.8] WARNING, no entry stored in dbm for [ENSG00000270318.1] WARNING, no entry stored in dbm for [ENSG00000224585.1] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000099251.14] WARNING, no entry stored in dbm for [ENSG00000254369.6] WARNING, no entry stored in dbm for [ENSG00000233231.1] WARNING, no entry stored in dbm for [ENSG00000180150.5] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000259994.1] WARNING, no entry stored in dbm for [ENSG00000236296.8] WARNING, no entry stored in dbm for [ENSG00000172297.7] WARNING, no entry stored in dbm for [ENSG00000249966.1] WARNING, no entry stored in dbm for [ENSG00000231166.2] WARNING, no entry stored in dbm for [ENSG00000225685.1] WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [ENSG00000241860.7] WARNING, no entry stored in dbm for [ENSG00000260464.1] WARNING, no entry stored in dbm for [ENSG00000226724.1] WARNING, no entry stored in dbm for [ENSG00000215093.3] WARNING, no entry stored in dbm for [ENSG00000259612.1] WARNING, no entry stored in dbm for [ENSG00000214548.18] WARNING, no entry stored in dbm for [ENSG00000267083.1] WARNING, no entry stored in dbm for [ENSG00000279861.1] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000267169.2] WARNING, no entry stored in dbm for [ENSG00000271638.1] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000242880.2] WARNING, no entry stored in dbm for [ENSG00000234337.4] WARNING, no entry stored in dbm for [ENSG00000286021.2] WARNING, no entry stored in dbm for [ENSG00000225733.6] WARNING, no entry stored in dbm for [ENSG00000254162.1] WARNING, no entry stored in dbm for [ENSG00000273399.2] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000266179.2] WARNING, no entry stored in dbm for [ENSG00000269540.1] WARNING, no entry stored in dbm for [ENSG00000249328.3] WARNING, no entry stored in dbm for [ENSG00000228928.1] WARNING, no entry stored in dbm for [ENSG00000228876.4] WARNING, no entry stored in dbm for [ENSG00000287137.1] WARNING, no entry stored in dbm for [ENSG00000216629.1] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000243069.8] WARNING, no entry stored in dbm for [ENSG00000231334.2] WARNING, no entry stored in dbm for [ENSG00000255847.5] WARNING, no entry stored in dbm for [ENSG00000259738.1] WARNING, no entry stored in dbm for [ENSG00000256196.2] WARNING, no entry stored in dbm for [ENSG00000245970.2] WARNING, no entry stored in dbm for [ENSG00000245970.2] WARNING, no entry stored in dbm for [ENSG00000286628.1] WARNING, no entry stored in dbm for [ENSG00000264964.2] WARNING, no entry stored in dbm for [ENSG00000286643.1] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000285907.1] WARNING, no entry stored in dbm for [ENSG00000273381.1] WARNING, no entry stored in dbm for [ENSG00000231078.1] WARNING, no entry stored in dbm for [ENSG00000287346.1] WARNING, no entry stored in dbm for [ENSG00000235944.8] WARNING, no entry stored in dbm for [ENSG00000230153.5] WARNING, no entry stored in dbm for [ENSG00000277011.1] WARNING, no entry stored in dbm for [ENSG00000237017.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000280068.1] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000255158.1] WARNING, no entry stored in dbm for [ENSG00000285668.1] WARNING, no entry stored in dbm for [ENSG00000285668.1] WARNING, no entry stored in dbm for [ENSG00000284678.1] WARNING, no entry stored in dbm for [ENSG00000244398.1] WARNING, no entry stored in dbm for [ENSG00000226107.1] WARNING, no entry stored in dbm for [ENSG00000272922.1] WARNING, no entry stored in dbm for [ENSG00000248973.3] WARNING, no entry stored in dbm for [ENSG00000250159.7] WARNING, no entry stored in dbm for [ENSG00000286159.1] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000253123.4] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000243979.2] WARNING, no entry stored in dbm for [ENSG00000259275.4] WARNING, no entry stored in dbm for [ENSG00000243531.1] WARNING, no entry stored in dbm for [ENSG00000271977.1] WARNING, no entry stored in dbm for [ENSG00000239985.2] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000276407.5] WARNING, no entry stored in dbm for [ENSG00000248898.3] WARNING, no entry stored in dbm for [ENSG00000186019.11] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000286195.1] WARNING, no entry stored in dbm for [ENSG00000204929.13] WARNING, no entry stored in dbm for [ENSG00000274378.1] WARNING, no entry stored in dbm for [ENSG00000277476.1] WARNING, no entry stored in dbm for [ENSG00000239622.1] WARNING, no entry stored in dbm for [ENSG00000286883.1] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000232677.9] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000255367.3] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000255367.3] WARNING, no entry stored in dbm for [ENSG00000198658.4] * STAR-Fusion complete. See output: /tmp/nxf.hPu4X30PWS/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)