Work Directory

Task
NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:BCLCONVERT (20260204_LH00166_0238_B23LG7FLT4;L002)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/d8cdb55fd4ff39fc82a9f84477f95e

Files (125)

Name Size Modified
.command.begin 6 bytes Jun 07, 2026 11:10 PM
.command.err 504 bytes Jun 07, 2026 11:50 PM
.command.log 3.8 KB Jun 07, 2026 11:50 PM
.command.out 2.4 KB Jun 07, 2026 11:50 PM
.command.run 14.4 KB Jun 07, 2026 11:10 PM
.command.sh 359 bytes Jun 07, 2026 11:10 PM
.command.trace 313 bytes Jun 07, 2026 11:50 PM
.command.yaml 3.6 KB Jun 07, 2026 11:10 PM
.exitcode 1 byte Jun 07, 2026 11:50 PM
output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_1_S7_L002_R1_001.fastq.gz 272.8 MB Jun 07, 2026 11:48 PM
output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_1_S7_L002_R2_001.fastq.gz 286.4 MB Jun 07, 2026 11:48 PM
output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_2_S16_L002_R1_001.fastq.gz 244.1 MB Jun 07, 2026 11:48 PM
output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_2_S16_L002_R2_001.fastq.gz 253.6 MB Jun 07, 2026 11:48 PM
output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_3_S24_L002_R1_001.fastq.gz 268.3 MB Jun 07, 2026 11:48 PM
output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_3_S24_L002_R2_001.fastq.gz 275.3 MB Jun 07, 2026 11:48 PM
output/786-O_FFPE_RNA_0001_B23LG7FLT4_1_S2_L002_R1_001.fastq.gz 7.5 GB Jun 07, 2026 11:48 PM
output/786-O_FFPE_RNA_0001_B23LG7FLT4_1_S2_L002_R2_001.fastq.gz 7.8 GB Jun 07, 2026 11:48 PM
output/786-O_FFPE_RNA_0001_B23LG7FLT4_2_S10_L002_R1_001.fastq.gz 8.2 GB Jun 07, 2026 11:48 PM
output/786-O_FFPE_RNA_0001_B23LG7FLT4_2_S10_L002_R2_001.fastq.gz 8.5 GB Jun 07, 2026 11:48 PM
output/786-O_FFPE_RNA_0001_B23LG7FLT4_3_S19_L002_R1_001.fastq.gz 7.8 GB Jun 07, 2026 11:48 PM
output/786-O_FFPE_RNA_0001_B23LG7FLT4_3_S19_L002_R2_001.fastq.gz 8.0 GB Jun 07, 2026 11:48 PM
output/A549_FFPE_01_RNA_0001_B23LG7FLT4_1_S3_L002_R1_001.fastq.gz 43.2 MB Jun 07, 2026 11:48 PM
output/A549_FFPE_01_RNA_0001_B23LG7FLT4_1_S3_L002_R2_001.fastq.gz 40.2 MB Jun 07, 2026 11:48 PM
output/A549_FFPE_01_RNA_0001_B23LG7FLT4_2_S11_L002_R1_001.fastq.gz 29.6 MB Jun 07, 2026 11:48 PM
output/A549_FFPE_01_RNA_0001_B23LG7FLT4_2_S11_L002_R2_001.fastq.gz 27.1 MB Jun 07, 2026 11:48 PM
output/A549_FFPE_01_RNA_0001_B23LG7FLT4_3_S20_L002_R1_001.fastq.gz 49.4 MB Jun 07, 2026 11:48 PM
output/A549_FFPE_01_RNA_0001_B23LG7FLT4_3_S20_L002_R2_001.fastq.gz 47.3 MB Jun 07, 2026 11:48 PM
output/A673_FFPE_RNA_0001_B23LG7FLT4_1_S29_L002_R1_001.fastq.gz 7.5 GB Jun 07, 2026 11:48 PM
output/A673_FFPE_RNA_0001_B23LG7FLT4_1_S29_L002_R2_001.fastq.gz 7.8 GB Jun 07, 2026 11:48 PM
output/A673_FFPE_RNA_0001_B23LG7FLT4_2_S37_L002_R1_001.fastq.gz 6.5 GB Jun 07, 2026 11:48 PM
output/A673_FFPE_RNA_0001_B23LG7FLT4_2_S37_L002_R2_001.fastq.gz 6.8 GB Jun 07, 2026 11:48 PM
output/A673_FFPE_RNA_0001_B23LG7FLT4_3_S45_L002_R1_001.fastq.gz 5.0 GB Jun 07, 2026 11:48 PM
output/A673_FFPE_RNA_0001_B23LG7FLT4_3_S45_L002_R2_001.fastq.gz 5.2 GB Jun 07, 2026 11:48 PM
output/BT-20_FFPE_RNA_0001_B23LG7FLT4_1_S6_L002_R1_001.fastq.gz 1.4 GB Jun 07, 2026 11:48 PM
output/BT-20_FFPE_RNA_0001_B23LG7FLT4_1_S6_L002_R2_001.fastq.gz 1.4 GB Jun 07, 2026 11:48 PM
output/BT-20_FFPE_RNA_0001_B23LG7FLT4_2_S15_L002_R1_001.fastq.gz 1.4 GB Jun 07, 2026 11:48 PM
output/BT-20_FFPE_RNA_0001_B23LG7FLT4_2_S15_L002_R2_001.fastq.gz 1.4 GB Jun 07, 2026 11:48 PM
output/BT-20_FFPE_RNA_0001_B23LG7FLT4_3_S23_L002_R1_001.fastq.gz 1.3 GB Jun 07, 2026 11:48 PM
output/BT-20_FFPE_RNA_0001_B23LG7FLT4_3_S23_L002_R2_001.fastq.gz 1.3 GB Jun 07, 2026 11:48 PM
output/BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1_S46_L002_R1_001.fastq.gz 209.0 MB Jun 07, 2026 11:48 PM
output/BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1_S46_L002_R2_001.fastq.gz 222.5 MB Jun 07, 2026 11:48 PM
output/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1_S30_L002_R1_001.fastq.gz 289.9 MB Jun 07, 2026 11:48 PM
output/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1_S30_L002_R2_001.fastq.gz 295.2 MB Jun 07, 2026 11:48 PM
output/ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1_S38_L002_R1_001.fastq.gz 222.6 MB Jun 07, 2026 11:48 PM
output/ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1_S38_L002_R2_001.fastq.gz 223.8 MB Jun 07, 2026 11:48 PM
output/EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1_S39_L002_R1_001.fastq.gz 265.1 MB Jun 07, 2026 11:48 PM
output/EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1_S39_L002_R2_001.fastq.gz 271.9 MB Jun 07, 2026 11:48 PM
output/FFPE_HD789_01_RNA_0002_B23LG7FLT4_1_S40_L002_R1_001.fastq.gz 6.1 GB Jun 07, 2026 11:48 PM
output/FFPE_HD789_01_RNA_0002_B23LG7FLT4_1_S40_L002_R2_001.fastq.gz 6.3 GB Jun 07, 2026 11:48 PM
output/FFPE_V4_0001_RNA_0001_B23LG7FLT4_1_S32_L002_R1_001.fastq.gz 4.6 GB Jun 07, 2026 11:48 PM
output/FFPE_V4_0001_RNA_0001_B23LG7FLT4_1_S32_L002_R2_001.fastq.gz 4.7 GB Jun 07, 2026 11:48 PM
output/Hs746T_FFPE_RNA_0001_23LG7FLT4_1_S12_L002_R1_001.fastq.gz 9.7 GB Jun 07, 2026 11:48 PM
output/Hs746T_FFPE_RNA_0001_23LG7FLT4_1_S12_L002_R2_001.fastq.gz 10.0 GB Jun 07, 2026 11:48 PM
output/Hs746T_FFPE_RNA_0001_B23LG7FLT4_1_S8_L002_R1_001.fastq.gz 8.7 GB Jun 07, 2026 11:48 PM
output/Hs746T_FFPE_RNA_0001_B23LG7FLT4_1_S8_L002_R2_001.fastq.gz 9.0 GB Jun 07, 2026 11:48 PM
output/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2_S17_L002_R1_001.fastq.gz 7.7 GB Jun 07, 2026 11:48 PM
output/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2_S17_L002_R2_001.fastq.gz 7.9 GB Jun 07, 2026 11:48 PM
output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_1_S25_L002_R1_001.fastq.gz 6.2 GB Jun 07, 2026 11:48 PM
output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_1_S25_L002_R2_001.fastq.gz 6.4 GB Jun 07, 2026 11:48 PM
output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_2_S33_L002_R1_001.fastq.gz 7.1 GB Jun 07, 2026 11:48 PM
output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_2_S33_L002_R2_001.fastq.gz 7.3 GB Jun 07, 2026 11:48 PM
output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_3_S41_L002_R1_001.fastq.gz 8.1 GB Jun 07, 2026 11:48 PM
output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_3_S41_L002_R2_001.fastq.gz 8.5 GB Jun 07, 2026 11:48 PM
output/Logs/Errors.log 0 bytes Jun 07, 2026 11:48 PM
output/Logs/FastqComplete.txt 73 bytes Jun 07, 2026 11:48 PM
output/Logs/Info.log 4.2 KB Jun 07, 2026 11:48 PM
output/Logs/Warnings.log 728 bytes Jun 07, 2026 11:48 PM
output/MCF7_FFPE_RNA_0001_B23LG7FLT4_1_S26_L002_R1_001.fastq.gz 7.0 GB Jun 07, 2026 11:48 PM
output/MCF7_FFPE_RNA_0001_B23LG7FLT4_1_S26_L002_R2_001.fastq.gz 7.3 GB Jun 07, 2026 11:48 PM
output/MCF7_FFPE_RNA_0001_B23LG7FLT4_2_S34_L002_R1_001.fastq.gz 6.2 GB Jun 07, 2026 11:48 PM
output/MCF7_FFPE_RNA_0001_B23LG7FLT4_2_S34_L002_R2_001.fastq.gz 6.5 GB Jun 07, 2026 11:48 PM
output/MCF7_FFPE_RNA_0001_B23LG7FLT4_3_S42_L002_R1_001.fastq.gz 7.1 GB Jun 07, 2026 11:48 PM
output/MCF7_FFPE_RNA_0001_B23LG7FLT4_3_S42_L002_R2_001.fastq.gz 7.4 GB Jun 07, 2026 11:48 PM
output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1_S27_L002_R1_001.fastq.gz 9.7 GB Jun 07, 2026 11:48 PM
output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1_S27_L002_R2_001.fastq.gz 10.1 GB Jun 07, 2026 11:48 PM
output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2_S35_L002_R1_001.fastq.gz 8.0 GB Jun 07, 2026 11:48 PM
output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2_S35_L002_R2_001.fastq.gz 8.2 GB Jun 07, 2026 11:48 PM
output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3_S43_L002_R1_001.fastq.gz 7.4 GB Jun 07, 2026 11:48 PM
output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3_S43_L002_R2_001.fastq.gz 7.8 GB Jun 07, 2026 11:48 PM
output/NTC_0001_0001_B23LG7FLT4_1_S48_L002_R1_001.fastq.gz 8.3 MB Jun 07, 2026 11:48 PM
output/NTC_0001_0001_B23LG7FLT4_1_S48_L002_R2_001.fastq.gz 10.5 MB Jun 07, 2026 11:48 PM
output/OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1_S47_L002_R1_001.fastq.gz 76.9 MB Jun 07, 2026 11:48 PM
output/OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1_S47_L002_R2_001.fastq.gz 70.7 MB Jun 07, 2026 11:48 PM
output/RT4_FFPE_RNA_0001_B23LG7FLT4_1_S1_L002_R1_001.fastq.gz 6.2 GB Jun 07, 2026 11:48 PM
output/RT4_FFPE_RNA_0001_B23LG7FLT4_1_S1_L002_R2_001.fastq.gz 6.4 GB Jun 07, 2026 11:48 PM
output/RT4_FFPE_RNA_0001_B23LG7FLT4_2_S9_L002_R1_001.fastq.gz 6.0 GB Jun 07, 2026 11:48 PM
output/RT4_FFPE_RNA_0001_B23LG7FLT4_2_S9_L002_R2_001.fastq.gz 6.2 GB Jun 07, 2026 11:48 PM
output/RT4_FFPE_RNA_0001_B23LG7FLT4_3_S18_L002_R1_001.fastq.gz 5.0 GB Jun 07, 2026 11:48 PM
output/RT4_FFPE_RNA_0001_B23LG7FLT4_3_S18_L002_R2_001.fastq.gz 5.3 GB Jun 07, 2026 11:48 PM
output/Reports/Adapter_Cycle_Metrics.csv 1.0 MB Jun 07, 2026 11:48 PM
output/Reports/Adapter_Metrics.csv 7.6 KB Jun 07, 2026 11:48 PM
output/Reports/Demultiplex_Detailed_Stats.csv 69.7 KB Jun 07, 2026 11:48 PM
output/Reports/Demultiplex_Stats.csv 5.6 KB Jun 07, 2026 11:48 PM
output/Reports/Demultiplex_Tile_Stats.csv 4.0 MB Jun 07, 2026 11:48 PM
output/Reports/IndexMetricsOut.bin 6.0 MB Jun 07, 2026 11:48 PM
output/Reports/Index_Hopping_Counts.csv 109.3 KB Jun 07, 2026 11:48 PM
output/Reports/Quality_Metrics.csv 10.2 KB Jun 07, 2026 11:48 PM
output/Reports/Quality_Tile_Metrics.csv 7.4 MB Jun 07, 2026 11:48 PM
output/Reports/RunInfo.xml 154.0 KB Jun 07, 2026 11:48 PM
output/Reports/SampleSheet.csv 22.5 KB Jun 07, 2026 11:48 PM
output/Reports/Top_Unknown_Barcodes.csv 47.1 KB Jun 07, 2026 11:48 PM
output/Reports/fastq_list.csv 9.7 KB Jun 07, 2026 11:48 PM
output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1_S5_L002_R1_001.fastq.gz 10.4 GB Jun 07, 2026 11:48 PM
output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1_S5_L002_R2_001.fastq.gz 10.7 GB Jun 07, 2026 11:48 PM
output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2_S14_L002_R1_001.fastq.gz 9.4 GB Jun 07, 2026 11:48 PM
output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2_S14_L002_R2_001.fastq.gz 9.7 GB Jun 07, 2026 11:48 PM
output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3_S22_L002_R1_001.fastq.gz 8.9 GB Jun 07, 2026 11:48 PM
output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3_S22_L002_R2_001.fastq.gz 9.2 GB Jun 07, 2026 11:48 PM
output/SW780_FFPE_RNA_0001_B23LG7FLT4_1_S28_L002_R1_001.fastq.gz 5.8 GB Jun 07, 2026 11:48 PM
output/SW780_FFPE_RNA_0001_B23LG7FLT4_1_S28_L002_R2_001.fastq.gz 6.1 GB Jun 07, 2026 11:48 PM
output/SW780_FFPE_RNA_0001_B23LG7FLT4_2_S36_L002_R1_001.fastq.gz 6.1 GB Jun 07, 2026 11:48 PM
output/SW780_FFPE_RNA_0001_B23LG7FLT4_2_S36_L002_R2_001.fastq.gz 6.3 GB Jun 07, 2026 11:48 PM
output/SW780_FFPE_RNA_0001_B23LG7FLT4_3_S44_L002_R1_001.fastq.gz 5.9 GB Jun 07, 2026 11:48 PM
output/SW780_FFPE_RNA_0001_B23LG7FLT4_3_S44_L002_R2_001.fastq.gz 6.0 GB Jun 07, 2026 11:48 PM
output/SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1_S31_L002_R1_001.fastq.gz 151.9 MB Jun 07, 2026 11:48 PM
output/SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1_S31_L002_R2_001.fastq.gz 155.4 MB Jun 07, 2026 11:48 PM
output/U118MG_FFPE_RNA_0001_B23LG7FLT4_1_S4_L002_R1_001.fastq.gz 8.8 GB Jun 07, 2026 11:48 PM
output/U118MG_FFPE_RNA_0001_B23LG7FLT4_1_S4_L002_R2_001.fastq.gz 9.0 GB Jun 07, 2026 11:48 PM
output/U118MG_FFPE_RNA_0001_B23LG7FLT4_2_S13_L002_R1_001.fastq.gz 9.2 GB Jun 07, 2026 11:48 PM
output/U118MG_FFPE_RNA_0001_B23LG7FLT4_2_S13_L002_R2_001.fastq.gz 9.6 GB Jun 07, 2026 11:48 PM
output/U118MG_FFPE_RNA_0001_B23LG7FLT4_3_S21_L002_R1_001.fastq.gz 9.1 GB Jun 07, 2026 11:48 PM
output/U118MG_FFPE_RNA_0001_B23LG7FLT4_3_S21_L002_R2_001.fastq.gz 9.5 GB Jun 07, 2026 11:48 PM
output/Undetermined_S0_L002_R1_001.fastq.gz 22.3 GB Jun 07, 2026 11:48 PM
output/Undetermined_S0_L002_R2_001.fastq.gz 21.8 GB Jun 07, 2026 11:48 PM
versions.yml 83 bytes Jun 07, 2026 11:48 PM