-ctat genome lib [/tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.bl2jPuB7UO/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary
-sample contains 10860033 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir -J /tmp/nxf.bl2jPuB7UO/OvarianNP_FFPE_L01_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.bl2jPuB7UO/OvarianNP_FFPE_L01_RNA_01_B23LG7FLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=42857.14/min
[20000], rate=46153.85/min
[30000], rate=50000.00/min
[40000], rate=52173.91/min
[50000], rate=55555.56/min
[60000], rate=59016.39/min
[70000], rate=64615.38/min
[80000], rate=68571.43/min
[90000], rate=75000.00/min
[100000], rate=76923.08/min
[110000], rate=79518.07/min
[120000], rate=81818.18/min
[130000], rate=86666.67/min
[140000], rate=86597.94/min
[150000], rate=90000.00/min
[160000], rate=91428.57/min
[170000], rate=91071.43/min
[180000], rate=93913.04/min
[190000], rate=94214.88/min
[200000], rate=96000.00/min
[210000], rate=96183.21/min
[220000], rate=95652.17/min
[230000], rate=96503.50/min
[240000], rate=96644.30/min
[250000], rate=95541.40/min
[260000], rate=94545.45/min
[270000], rate=92045.45/min
[280000], rate=89361.70/min
[290000], rate=87000.00/min
[300000], rate=86124.40/min
[310000], rate=84931.51/min
[320000], rate=83842.79/min
[330000], rate=83898.31/min
[340000], rate=82591.09/min
[350000], rate=81395.35/min -building interval tree based on /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=85714.29/min
[20000], rate=100000.00/min
[30000], rate=100000.00/min
[40000], rate=85714.29/min
[50000], rate=85714.29/min
[60000], rate=85714.29/min
[70000], rate=85714.29/min
[80000], rate=92307.69/min
[90000], rate=90000.00/min
[100000], rate=86956.52/min
[110000], rate=86842.11/min
[120000], rate=86746.99/min
[130000], rate=87640.45/min
[140000], rate=88421.05/min
[150000], rate=88235.29/min
[160000], rate=85714.29/min
[170000], rate=83606.56/min
[180000], rate=83076.92/min
[190000], rate=82608.70/min
[200000], rate=82758.62/min
[210000], rate=84000.00/min
[220000], rate=81481.48/min
[230000], rate=80701.75/min
[240000], rate=80000.00/min
[250000], rate=80213.90/min
[260000], rate=79187.82/min
[270000], rate=78260.87/min
[280000], rate=78873.24/min
[290000], rate=79816.51/min
[300000], rate=80000.00/min
[310000], rate=79148.94/min
[320000], rate=79012.35/min
[330000], rate=78884.46/min
[340000], rate=79377.43/min
[350000], rate=80152.67/min -building interval tree based on /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=100000.00/min
[20000], rate=100000.00/min
[30000], rate=100000.00/min
[40000], rate=100000.00/min
[50000], rate=93750.00/min
[60000], rate=97297.30/min
[70000], rate=100000.00/min
[80000], rate=96000.00/min
[90000], rate=101886.79/min
[100000], rate=107142.86/min
[110000], rate=111864.41/min
[120000], rate=114285.71/min
[130000], rate=114705.88/min
[140000], rate=115068.49/min
[150000], rate=118421.05/min
[160000], rate=114285.71/min
[170000], rate=109677.42/min
[180000], rate=106930.69/min
[190000], rate=104587.16/min
[200000], rate=101694.92/min
[210000], rate=99212.60/min
[220000], rate=97777.78/min
[230000], rate=92000.00/min
[240000], rate=88343.56/min
[250000], rate=85714.29/min
[260000], rate=84324.32/min
[270000], rate=83937.82/min
[280000], rate=84000.00/min
[290000], rate=84466.02/min
[300000], rate=83720.93/min
[310000], rate=81222.71/min
[320000], rate=79338.84/min
[330000], rate=78571.43/min
[340000], rate=78764.48/min
[350000], rate=78066.91/min -building interval tree based on /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=100000.00/min
[20000], rate=133333.33/min
[30000], rate=138461.54/min
[40000], rate=133333.33/min
[50000], rate=142857.14/min
[60000], rate=144000.00/min
[70000], rate=140000.00/min
[80000], rate=141176.47/min
[90000], rate=142105.26/min
[100000], rate=139534.88/min
[110000], rate=143478.26/min
[120000], rate=124137.93/min
[130000], rate=106849.32/min
[140000], rate=96551.72/min
[150000], rate=88235.29/min
[160000], rate=84210.53/min
[170000], rate=81600.00/min
[180000], rate=80597.01/min
[190000], rate=80281.69/min
[200000], rate=80536.91/min
[210000], rate=78750.00/min
[220000], rate=78571.43/min
[230000], rate=78409.09/min
[240000], rate=79120.88/min
[250000], rate=78534.03/min
[260000], rate=76847.29/min
[270000], rate=75348.84/min
[280000], rate=74008.81/min
[290000], rate=73109.24/min
[300000], rate=72874.49/min
[310000], rate=72941.18/min
[320000], rate=72180.45/min
[330000], rate=70967.74/min
[340000], rate=70103.09/min
[350000], rate=69536.42/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir --filt_file /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
6000000.00 reads per min processed...
4500000.00 reads per min processed...
4800000.00 reads per min processed...
5000000.00 reads per min processed...
4500000.00 reads per min processed...
4666666.67 reads per min processed...
4800000.00 reads per min processed...
4909090.91 reads per min processed...
5000000.00 reads per min processed...
5076923.08 reads per min processed...
4800000.00 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.bl2jPuB7UO/OvarianNP_FFPE_L01_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -17318.844354
EM: Round [1] log likelihood: -17288.930454
EM: Round [2] log likelihood: -17273.502068
EM: Round [3] log likelihood: -17264.528046
EM: Round [4] log likelihood: -17259.154042
EM: Round [5] log likelihood: -17255.925193
EM: Round [6] log likelihood: -17253.977289
EM: Round [7] log likelihood: -17252.786507
EM: Round [8] log likelihood: -17252.042564
EM: Round [9] log likelihood: -17251.565272
EM: Round [10] log likelihood: -17251.250446
EM: Round [11] log likelihood: -17251.037221
EM: Round [12] log likelihood: -17250.889308
EM: Round [13] log likelihood: -17250.784503
EM: Round [14] log likelihood: -17250.708842
EM: Round [15] log likelihood: -17250.653312
EM: Round [16] log likelihood: -17250.611951
EM: Round [17] log likelihood: -17250.580729
EM: Round [18] log likelihood: -17250.556870
EM: Round [19] log likelihood: -17250.538431
EM: Round [20] log likelihood: -17250.524030
EM: Round [21] log likelihood: -17250.512671
EM: Round [22] log likelihood: -17250.503630
EM: Round [23] log likelihood: -17250.496372
EM: Round [24] log likelihood: -17250.490498
EM: Round [25] log likelihood: -17250.485709
EM: Round [26] log likelihood: -17250.481777
EM: Round [27] log likelihood: -17250.478527
EM: Round [28] log likelihood: -17250.475825
EM: Round [29] log likelihood: -17250.473565
EM: Round [30] log likelihood: -17250.471665
EM: Round [31] log likelihood: -17250.470060
EM: Round [32] log likelihood: -17250.468696
EM: Round [33] log likelihood: -17250.467534
EM: Round [34] log likelihood: -17250.466538
EM: Round [35] log likelihood: -17250.465682
EM: Round [36] log likelihood: -17250.464943
EM: Round [37] log likelihood: -17250.464302
EM: Round [38] log likelihood: -17250.463746
EM: Round [39] log likelihood: -17250.463260
EM: Round [40] log likelihood: -17250.462835
EM: Round [41] log likelihood: -17250.462462
EM: Round [42] log likelihood: -17250.462134
EM: Round [43] log likelihood: -17250.461844
EM: Round [44] log likelihood: -17250.461587
EM: Round [45] log likelihood: -17250.461359
EM: Round [46] log likelihood: -17250.461156
EM: Round [47] log likelihood: -17250.460976
EM: Round [48] log likelihood: -17250.460814
EM: Round [49] log likelihood: -17250.460669
EM: Round [50] log likelihood: -17250.460539
EM: Round [51] log likelihood: -17250.460421
EM: Round [52] log likelihood: -17250.460316
EM: Round [53] log likelihood: -17250.460220
EM: Stopping iterations at round 53 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -17309.340678
EM: Round [1] log likelihood: -17282.508242
EM: Round [2] log likelihood: -17269.359098
EM: Round [3] log likelihood: -17261.920115
EM: Round [4] log likelihood: -17257.532536
EM: Round [5] log likelihood: -17254.915048
EM: Round [6] log likelihood: -17253.337544
EM: Round [7] log likelihood: -17252.370189
EM: Round [8] log likelihood: -17251.762594
EM: Round [9] log likelihood: -17251.370387
EM: Round [10] log likelihood: -17251.110161
EM: Round [11] log likelihood: -17250.933041
EM: Round [12] log likelihood: -17250.809722
EM: Round [13] log likelihood: -17250.722148
EM: Round [14] log likelihood: -17250.658884
EM: Round [15] log likelihood: -17250.612493
EM: Round [16] log likelihood: -17250.578021
EM: Round [17] log likelihood: -17250.552102
EM: Round [18] log likelihood: -17250.532403
EM: Round [19] log likelihood: -17250.517285
EM: Round [20] log likelihood: -17250.505579
EM: Round [21] log likelihood: -17250.496439
EM: Round [22] log likelihood: -17250.489250
EM: Round [23] log likelihood: -17250.483556
EM: Round [24] log likelihood: -17250.479017
EM: Round [25] log likelihood: -17250.475378
EM: Round [26] log likelihood: -17250.472446
EM: Round [27] log likelihood: -17250.470071
EM: Round [28] log likelihood: -17250.468140
EM: Round [29] log likelihood: -17250.466563
EM: Round [30] log likelihood: -17250.465271
EM: Round [31] log likelihood: -17250.464209
EM: Round [32] log likelihood: -17250.463333
EM: Round [33] log likelihood: -17250.462610
EM: Round [34] log likelihood: -17250.462010
EM: Round [35] log likelihood: -17250.461512
EM: Round [36] log likelihood: -17250.461097
EM: Round [37] log likelihood: -17250.460751
EM: Round [38] log likelihood: -17250.460463
EM: Round [39] log likelihood: -17250.460221
EM: Round [40] log likelihood: -17250.460019
EM: Round [41] log likelihood: -17250.459849
EM: Round [42] log likelihood: -17250.459706
EM: Round [43] log likelihood: -17250.459586
EM: Round [44] log likelihood: -17250.459485
EM: Round [45] log likelihood: -17250.459400
EM: Stopping iterations at round 45 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 10860033 > /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir > /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir --annotate /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir
-done, see /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 151, filtered: 1659)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.bl2jPuB7UO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.bl2jPuB7UO/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000287991.1]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000197558.13]
WARNING, no entry stored in dbm for [ENSG00000197558.13]
WARNING, no entry stored in dbm for [ENSG00000279903.1]
WARNING, no entry stored in dbm for [ENSG00000213693.4]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000213880.3]
WARNING, no entry stored in dbm for [ENSG00000213862.4]
WARNING, no entry stored in dbm for [ENSG00000241157.1]
WARNING, no entry stored in dbm for [ENSG00000244270.1]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000207269.1]
WARNING, no entry stored in dbm for [ENSG00000202058.1]
WARNING, no entry stored in dbm for [ENSG00000207269.1]
WARNING, no entry stored in dbm for [ENSG00000201315.1]
WARNING, no entry stored in dbm for [ENSG00000207269.1]
WARNING, no entry stored in dbm for [ENSG00000199683.1]
WARNING, no entry stored in dbm for [ENSG00000207269.1]
WARNING, no entry stored in dbm for [ENSG00000201875.1]
WARNING, no entry stored in dbm for [ENSG00000207269.1]
WARNING, no entry stored in dbm for [ENSG00000287576.1]
WARNING, no entry stored in dbm for [ENSG00000207269.1]
WARNING, no entry stored in dbm for [ENSG00000271394.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000244040.7]
WARNING, no entry stored in dbm for [ENSG00000239820.3]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000205853.12]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000200434.1]
WARNING, no entry stored in dbm for [ENSG00000226926.7]
WARNING, no entry stored in dbm for [ENSG00000212743.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000251458.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000248890.2]
WARNING, no entry stored in dbm for [ENSG00000245482.2]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000185638.9]
WARNING, no entry stored in dbm for [ENSG00000173295.8]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000232234.4]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000233406.5]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000225032.5]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000274717.1]
WARNING, no entry stored in dbm for [ENSG00000234567.1]
WARNING, no entry stored in dbm for [ENSG00000227954.7]
WARNING, no entry stored in dbm for [ENSG00000251031.2]
WARNING, no entry stored in dbm for [ENSG00000287090.1]
WARNING, no entry stored in dbm for [ENSG00000222043.2]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000205682.2]
WARNING, no entry stored in dbm for [ENSG00000286970.1]
WARNING, no entry stored in dbm for [ENSG00000267598.1]
WARNING, no entry stored in dbm for [ENSG00000248560.1]
WARNING, no entry stored in dbm for [ENSG00000224721.1]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
* STAR-Fusion complete. See output: /tmp/nxf.bl2jPuB7UO/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)