.command.out - Workdir - NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (KG1_FFPE_01_RNA_0003_B23LG7FLT4_3)

File Info

Filename: .command.out
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/bde767dcddbb3f67752af5aebab15f/.command.out
Size: 324 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (KG1_FFPE_01_RNA_0003_B23LG7FLT4_3)
Attempt

Content

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  KG1_FFPE_01_RNA_0003_B23LG7FLT4_3: vaf_p90=1.000000 -> CLEAN

Output saved to: KG1_FFPE_01_RNA_0003_B23LG7FLT4_3.predictions.csv
Summary: 0/1 samples flagged as contaminated