Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/1799ae01141748bbc5cb664a87c9fb/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/efd79a6560964be06bc32a92efa0dc/BT-20_FFPE_RNA_0001_B23LG7FLT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/efd79a6560964be06bc32a92efa0dc/BT-20_FFPE_RNA_0001_B23LG7FLT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/1799ae01141748bbc5cb664a87c9fb/.command.run
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory