Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/e8eea7be387418c2ba0275d3363320/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/e8eea7be387418c2ba0275d3363320/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/9041cda02e1ccc7a78f8160fd1a018/MCF7_FFPE_RNA_0001_B23LG7FLT4_3_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/975bd8db7f9bf6244e015e16316af8/MCF7_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/9041cda02e1ccc7a78f8160fd1a018/MCF7_FFPE_RNA_0001_B23LG7FLT4_3_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.d2Y6gfnuWk/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary
-sample contains 294950005 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir  -J /tmp/nxf.d2Y6gfnuWk/MCF7_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction  -O /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.d2Y6gfnuWk/MCF7_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction
-building interval tree based on /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[2840000], rate=43962.85/min -building interval tree based on /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2800000], rate=40124.19/min 
[2810000], rate=40200.29/min 
[2820000], rate=40276.12/min 
[2830000], rate=40332.54/min -building interval tree based on /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

[10000], rate=50000.00/min 
[20000], rate=54545.45/min 
[30000], rate=58064.52/min 
[40000], rate=58536.59/min 
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[1490000], rate=31084.84/min 
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[2550000], rate=33722.72/min 
[2560000], rate=33676.83/min 
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[2590000], rate=33570.97/min 
[2600000], rate=33548.39/min 
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[2620000], rate=33496.70/min 
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[2640000], rate=33495.45/min 
[2650000], rate=33508.96/min 
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[2680000], rate=33520.95/min 
[2690000], rate=33534.18/min 
[2700000], rate=33554.27/min 
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[2720000], rate=33594.07/min 
[2730000], rate=33600.00/min 
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[2770000], rate=33670.99/min 
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[2790000], rate=33743.20/min 
[2800000], rate=33782.43/min 
[2810000], rate=33821.46/min 
[2820000], rate=33880.66/min -building interval tree based on /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.13 min).
-mapping reads to genes

[10000], rate=100000.00/min 
[20000], rate=85714.29/min 
[30000], rate=90000.00/min 
[40000], rate=92307.69/min 
[50000], rate=93750.00/min 
[60000], rate=109090.91/min 
[70000], rate=127272.73/min 
[80000], rate=133333.33/min 
[90000], rate=122727.27/min 
[100000], rate=122448.98/min 
[110000], rate=122222.22/min 
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[300000], rate=131386.86/min 
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[1400000], rate=23509.66/min 
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[1450000], rate=23947.15/min 
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[1970000], rate=27636.19/min 
[1980000], rate=27672.96/min 
[1990000], rate=27715.88/min 
[2000000], rate=27745.66/min 
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[2110000], rate=27860.92/min 
[2120000], rate=27882.51/min 
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[2160000], rate=28027.68/min 
[2170000], rate=28084.56/min 
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[2240000], rate=28438.43/min 
[2250000], rate=28493.04/min 
[2260000], rate=28541.36/min 
[2270000], rate=28589.42/min 
[2280000], rate=28643.22/min 
[2290000], rate=28696.74/min 
[2300000], rate=28750.00/min 
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[2330000], rate=28926.13/min 
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[2420000], rate=29524.20/min 
[2430000], rate=29592.04/min 
[2440000], rate=29665.65/min 
[2450000], rate=29745.04/min 
[2460000], rate=29824.21/min 
[2470000], rate=29903.15/min 
[2480000], rate=29981.87/min 
[2490000], rate=30060.36/min 
[2500000], rate=30096.31/min 
[2510000], rate=30083.90/min 
[2520000], rate=30107.53/min 
[2530000], rate=30131.00/min 
[2540000], rate=30178.22/min 
[2550000], rate=30219.24/min 
[2560000], rate=30260.05/min 
[2570000], rate=30306.60/min 
[2580000], rate=30352.94/min 
[2590000], rate=30399.06/min 
[2600000], rate=30444.96/min 
[2610000], rate=30490.65/min 
[2620000], rate=30542.06/min 
[2630000], rate=30593.25/min 
[2640000], rate=30638.30/min 
[2650000], rate=30689.06/min 
[2660000], rate=30745.52/min 
[2670000], rate=30801.77/min 
[2680000], rate=30857.80/min 
[2690000], rate=30907.70/min 
[2700000], rate=30957.39/min 
[2710000], rate=31006.86/min 
[2720000], rate=31056.14/min 
[2730000], rate=31105.20/min 
[2740000], rate=31154.06/min 
[2750000], rate=31202.72/min 
[2760000], rate=31251.18/min 
[2770000], rate=31305.33/min 
[2780000], rate=31353.38/min 
[2790000], rate=31401.24/min 
[2800000], rate=31460.67/min 
[2810000], rate=31514.02/min 
[2820000], rate=31567.16/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 15000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 8400000.00 reads per min processed...  
 6857142.86 reads per min processed...  
 6750000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5538461.54 reads per min processed...  
 5571428.57 reads per min processed...  
 5600000.00 reads per min processed...  
 5294117.65 reads per min processed...  
 5333333.33 reads per min processed...  
 5100000.00 reads per min processed...  
 5142857.14 reads per min processed...  
 5181818.18 reads per min processed...  
 5000000.00 reads per min processed...  
 5040000.00 reads per min processed...  
 4888888.89 reads per min processed...  
 4928571.43 reads per min processed...  
 4800000.00 reads per min processed...  
 4838709.68 reads per min processed...  
 4727272.73 reads per min processed...  
 4764705.88 reads per min processed...  
 4666666.67 reads per min processed...  
 4702702.70 reads per min processed...  
 4615384.62 reads per min processed...  
 4650000.00 reads per min processed...  
 4682926.83 reads per min processed...  
 4604651.16 reads per min processed...  
 4636363.64 reads per min processed...  
 4565217.39 reads per min processed...  
 4595744.68 reads per min processed...  
 4625000.00 reads per min processed...  
 4560000.00 reads per min processed...  
 4588235.29 reads per min processed...  
 4528301.89 reads per min processed...  
 4555555.56 reads per min processed...  
 4581818.18 reads per min processed...  
 4607142.86 reads per min processed...  
 4551724.14 reads per min processed...  
 4576271.19 reads per min processed...  
 4600000.00 reads per min processed...  
 4548387.10 reads per min processed...  
 4645161.29 reads per min processed...  
 4741935.48 reads per min processed...  
 4761904.76 reads per min processed...  
 4857142.86 reads per min processed...  
 4875000.00 reads per min processed...  
 4968750.00 reads per min processed...  
 4984615.38 reads per min processed...  
 5000000.00 reads per min processed...  
 4941176.47 reads per min processed...  
 4956521.74 reads per min processed...  
 4901408.45 reads per min processed...  
 4916666.67 reads per min processed...  
 4931506.85 reads per min processed...  
 4945945.95 reads per min processed...  
 4960000.00 reads per min processed...  
 4909090.91 reads per min processed...  
 4923076.92 reads per min processed...  
 4936708.86 reads per min processed...  
 4888888.89 reads per min processed...  
 4902439.02 reads per min processed...  
 4915662.65 reads per min processed...  
 4928571.43 reads per min processed...  
 4883720.93 reads per min processed...  
 4896551.72 reads per min processed...  
 4909090.91 reads per min processed...  
 4866666.67 reads per min processed...  
 4879120.88 reads per min processed...  
 4891304.35 reads per min processed...  
 4903225.81 reads per min processed...  
 4863157.89 reads per min processed...  
 4875000.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.d2Y6gfnuWk/MCF7_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -1706864.454348
EM: Round [1] log likelihood: -1706216.066714
EM: Round [2] log likelihood: -1706030.454029
EM: Round [3] log likelihood: -1705946.786934
EM: Round [4] log likelihood: -1705902.966099
EM: Round [5] log likelihood: -1705877.710022
EM: Round [6] log likelihood: -1705862.081321
EM: Round [7] log likelihood: -1705851.836393
EM: Round [8] log likelihood: -1705844.787156
EM: Round [9] log likelihood: -1705839.733358
EM: Round [10] log likelihood: -1705835.982018
EM: Round [11] log likelihood: -1705833.114696
EM: Round [12] log likelihood: -1705830.868370
EM: Round [13] log likelihood: -1705829.071597
EM: Round [14] log likelihood: -1705827.608916
EM: Round [15] log likelihood: -1705826.400252
EM: Round [16] log likelihood: -1705825.388606
EM: Round [17] log likelihood: -1705824.532442
EM: Round [18] log likelihood: -1705823.800861
EM: Round [19] log likelihood: -1705823.170450
EM: Round [20] log likelihood: -1705822.623167
EM: Round [21] log likelihood: -1705822.144904
EM: Round [22] log likelihood: -1705821.724483
EM: Round [23] log likelihood: -1705821.352935
EM: Round [24] log likelihood: -1705821.022989
EM: Round [25] log likelihood: -1705820.728690
EM: Round [26] log likelihood: -1705820.465119
EM: Round [27] log likelihood: -1705820.228179
EM: Round [28] log likelihood: -1705820.014433
EM: Round [29] log likelihood: -1705819.820977
EM: Round [30] log likelihood: -1705819.645346
EM: Round [31] log likelihood: -1705819.485434
EM: Round [32] log likelihood: -1705819.339432
EM: Round [33] log likelihood: -1705819.205781
EM: Round [34] log likelihood: -1705819.083128
EM: Round [35] log likelihood: -1705818.970301
EM: Round [36] log likelihood: -1705818.866275
EM: Round [37] log likelihood: -1705818.770151
EM: Round [38] log likelihood: -1705818.681143
EM: Round [39] log likelihood: -1705818.598556
EM: Round [40] log likelihood: -1705818.521778
EM: Round [41] log likelihood: -1705818.450265
EM: Round [42] log likelihood: -1705818.383536
EM: Round [43] log likelihood: -1705818.321163
EM: Round [44] log likelihood: -1705818.262763
EM: Round [45] log likelihood: -1705818.207995
EM: Round [46] log likelihood: -1705818.156553
EM: Round [47] log likelihood: -1705818.108162
EM: Round [48] log likelihood: -1705818.062576
EM: Round [49] log likelihood: -1705818.019573
EM: Round [50] log likelihood: -1705817.978951
EM: Round [51] log likelihood: -1705817.940530
EM: Round [52] log likelihood: -1705817.904146
EM: Round [53] log likelihood: -1705817.869650
EM: Round [54] log likelihood: -1705817.836906
EM: Round [55] log likelihood: -1705817.805791
EM: Round [56] log likelihood: -1705817.776193
EM: Round [57] log likelihood: -1705817.748010
EM: Round [58] log likelihood: -1705817.721147
EM: Round [59] log likelihood: -1705817.695519
EM: Round [60] log likelihood: -1705817.671048
EM: Round [61] log likelihood: -1705817.647660
EM: Round [62] log likelihood: -1705817.625290
EM: Round [63] log likelihood: -1705817.603876
EM: Round [64] log likelihood: -1705817.583361
EM: Round [65] log likelihood: -1705817.563694
EM: Round [66] log likelihood: -1705817.544825
EM: Round [67] log likelihood: -1705817.526710
EM: Round [68] log likelihood: -1705817.509308
EM: Round [69] log likelihood: -1705817.492580
EM: Round [70] log likelihood: -1705817.476489
EM: Round [71] log likelihood: -1705817.461004
EM: Round [72] log likelihood: -1705817.446092
EM: Round [73] log likelihood: -1705817.431724
EM: Round [74] log likelihood: -1705817.417874
EM: Round [75] log likelihood: -1705817.404515
EM: Round [76] log likelihood: -1705817.391625
EM: Round [77] log likelihood: -1705817.379180
EM: Round [78] log likelihood: -1705817.367161
EM: Round [79] log likelihood: -1705817.355546
EM: Round [80] log likelihood: -1705817.344319
EM: Round [81] log likelihood: -1705817.333460
EM: Round [82] log likelihood: -1705817.322955
EM: Round [83] log likelihood: -1705817.312788
EM: Round [84] log likelihood: -1705817.302943
EM: Round [85] log likelihood: -1705817.293408
EM: Round [86] log likelihood: -1705817.284169
EM: Round [87] log likelihood: -1705817.275215
EM: Round [88] log likelihood: -1705817.266532
EM: Round [89] log likelihood: -1705817.258112
EM: Round [90] log likelihood: -1705817.249942
EM: Round [91] log likelihood: -1705817.242013
EM: Round [92] log likelihood: -1705817.234316
EM: Round [93] log likelihood: -1705817.226841
EM: Round [94] log likelihood: -1705817.219581
EM: Round [95] log likelihood: -1705817.212527
EM: Round [96] log likelihood: -1705817.205671
EM: Round [97] log likelihood: -1705817.199007
EM: Round [98] log likelihood: -1705817.192526
EM: Round [99] log likelihood: -1705817.186223
EM: Round [100] log likelihood: -1705817.180092
EM: Round [101] log likelihood: -1705817.174125
EM: Round [102] log likelihood: -1705817.168318
EM: Round [103] log likelihood: -1705817.162665
EM: Round [104] log likelihood: -1705817.157160
EM: Round [105] log likelihood: -1705817.151798
EM: Round [106] log likelihood: -1705817.146576
EM: Round [107] log likelihood: -1705817.141487
EM: Round [108] log likelihood: -1705817.136528
EM: Round [109] log likelihood: -1705817.131694
EM: Round [110] log likelihood: -1705817.126982
EM: Round [111] log likelihood: -1705817.122387
EM: Round [112] log likelihood: -1705817.117905
EM: Round [113] log likelihood: -1705817.113534
EM: Round [114] log likelihood: -1705817.109269
EM: Round [115] log likelihood: -1705817.105108
EM: Round [116] log likelihood: -1705817.101046
EM: Round [117] log likelihood: -1705817.097082
EM: Round [118] log likelihood: -1705817.093212
EM: Round [119] log likelihood: -1705817.089433
EM: Round [120] log likelihood: -1705817.085742
EM: Round [121] log likelihood: -1705817.082138
EM: Round [122] log likelihood: -1705817.078616
EM: Round [123] log likelihood: -1705817.075176
EM: Round [124] log likelihood: -1705817.071815
EM: Round [125] log likelihood: -1705817.068529
EM: Round [126] log likelihood: -1705817.065318
EM: Round [127] log likelihood: -1705817.062179
EM: Round [128] log likelihood: -1705817.059110
EM: Round [129] log likelihood: -1705817.056110
EM: Round [130] log likelihood: -1705817.053175
EM: Round [131] log likelihood: -1705817.050305
EM: Round [132] log likelihood: -1705817.047497
EM: Round [133] log likelihood: -1705817.044750
EM: Round [134] log likelihood: -1705817.042063
EM: Round [135] log likelihood: -1705817.039433
EM: Round [136] log likelihood: -1705817.036859
EM: Round [137] log likelihood: -1705817.034340
EM: Round [138] log likelihood: -1705817.031874
EM: Round [139] log likelihood: -1705817.029460
EM: Round [140] log likelihood: -1705817.027097
EM: Round [141] log likelihood: -1705817.024783
EM: Round [142] log likelihood: -1705817.022516
EM: Round [143] log likelihood: -1705817.020297
EM: Round [144] log likelihood: -1705817.018122
EM: Round [145] log likelihood: -1705817.015992
EM: Round [146] log likelihood: -1705817.013906
EM: Round [147] log likelihood: -1705817.011861
EM: Round [148] log likelihood: -1705817.009858
EM: Round [149] log likelihood: -1705817.007895
EM: Round [150] log likelihood: -1705817.005971
EM: Round [151] log likelihood: -1705817.004085
EM: Round [152] log likelihood: -1705817.002236
EM: Round [153] log likelihood: -1705817.000424
EM: Round [154] log likelihood: -1705816.998647
EM: Round [155] log likelihood: -1705816.996905
EM: Round [156] log likelihood: -1705816.995196
EM: Round [157] log likelihood: -1705816.993521
EM: Round [158] log likelihood: -1705816.991878
EM: Round [159] log likelihood: -1705816.990266
EM: Round [160] log likelihood: -1705816.988685
EM: Round [161] log likelihood: -1705816.987134
EM: Round [162] log likelihood: -1705816.985612
EM: Round [163] log likelihood: -1705816.984119
EM: Round [164] log likelihood: -1705816.982654
EM: Round [165] log likelihood: -1705816.981217
EM: Round [166] log likelihood: -1705816.979806
EM: Round [167] log likelihood: -1705816.978421
EM: Round [168] log likelihood: -1705816.977062
EM: Round [169] log likelihood: -1705816.975728
EM: Round [170] log likelihood: -1705816.974418
EM: Round [171] log likelihood: -1705816.973133
EM: Round [172] log likelihood: -1705816.971870
EM: Round [173] log likelihood: -1705816.970631
EM: Round [174] log likelihood: -1705816.969414
EM: Round [175] log likelihood: -1705816.968219
EM: Round [176] log likelihood: -1705816.967045
EM: Round [177] log likelihood: -1705816.965892
EM: Round [178] log likelihood: -1705816.964760
EM: Round [179] log likelihood: -1705816.963647
EM: Round [180] log likelihood: -1705816.962555
EM: Round [181] log likelihood: -1705816.961481
EM: Round [182] log likelihood: -1705816.960427
EM: Round [183] log likelihood: -1705816.959391
EM: Round [184] log likelihood: -1705816.958373
EM: Round [185] log likelihood: -1705816.957372
EM: Round [186] log likelihood: -1705816.956389
EM: Round [187] log likelihood: -1705816.955423
EM: Round [188] log likelihood: -1705816.954473
EM: Round [189] log likelihood: -1705816.953540
EM: Round [190] log likelihood: -1705816.952623
EM: Round [191] log likelihood: -1705816.951721
EM: Round [192] log likelihood: -1705816.950835
EM: Round [193] log likelihood: -1705816.949963
EM: Round [194] log likelihood: -1705816.949106
EM: Round [195] log likelihood: -1705816.948264
EM: Round [196] log likelihood: -1705816.947436
EM: Round [197] log likelihood: -1705816.946621
EM: Round [198] log likelihood: -1705816.945820
EM: Round [199] log likelihood: -1705816.945033
EM: Round [200] log likelihood: -1705816.944258
EM: Round [201] log likelihood: -1705816.943496
EM: Round [202] log likelihood: -1705816.942747
EM: Round [203] log likelihood: -1705816.942010
EM: Round [204] log likelihood: -1705816.941285
EM: Round [205] log likelihood: -1705816.940572
EM: Round [206] log likelihood: -1705816.939871
EM: Round [207] log likelihood: -1705816.939180
EM: Round [208] log likelihood: -1705816.938501
EM: Round [209] log likelihood: -1705816.937833
EM: Round [210] log likelihood: -1705816.937176
EM: Round [211] log likelihood: -1705816.936529
EM: Round [212] log likelihood: -1705816.935893
EM: Round [213] log likelihood: -1705816.935266
EM: Round [214] log likelihood: -1705816.934650
EM: Round [215] log likelihood: -1705816.934043
EM: Round [216] log likelihood: -1705816.933446
EM: Round [217] log likelihood: -1705816.932859
EM: Round [218] log likelihood: -1705816.932280
EM: Round [219] log likelihood: -1705816.931711
EM: Round [220] log likelihood: -1705816.931151
EM: Round [221] log likelihood: -1705816.930599
EM: Round [222] log likelihood: -1705816.930056
EM: Round [223] log likelihood: -1705816.929522
EM: Round [224] log likelihood: -1705816.928995
EM: Round [225] log likelihood: -1705816.928477
EM: Round [226] log likelihood: -1705816.927967
EM: Round [227] log likelihood: -1705816.927464
EM: Round [228] log likelihood: -1705816.926970
EM: Round [229] log likelihood: -1705816.926483
EM: Round [230] log likelihood: -1705816.926003
EM: Round [231] log likelihood: -1705816.925531
EM: Round [232] log likelihood: -1705816.925065
EM: Round [233] log likelihood: -1705816.924607
EM: Round [234] log likelihood: -1705816.924156
EM: Round [235] log likelihood: -1705816.923712
EM: Round [236] log likelihood: -1705816.923274
EM: Round [237] log likelihood: -1705816.922843
EM: Round [238] log likelihood: -1705816.922418
EM: Round [239] log likelihood: -1705816.922000
EM: Round [240] log likelihood: -1705816.921588
EM: Round [241] log likelihood: -1705816.921182
EM: Round [242] log likelihood: -1705816.920782
EM: Round [243] log likelihood: -1705816.920388
EM: Round [244] log likelihood: -1705816.919999
EM: Round [245] log likelihood: -1705816.919617
EM: Round [246] log likelihood: -1705816.919240
EM: Round [247] log likelihood: -1705816.918869
EM: Round [248] log likelihood: -1705816.918503
EM: Round [249] log likelihood: -1705816.918143
EM: Round [250] log likelihood: -1705816.917787
EM: Round [251] log likelihood: -1705816.917437
EM: Round [252] log likelihood: -1705816.917092
EM: Round [253] log likelihood: -1705816.916753
EM: Round [254] log likelihood: -1705816.916418
EM: Round [255] log likelihood: -1705816.916087
EM: Round [256] log likelihood: -1705816.915762
EM: Round [257] log likelihood: -1705816.915441
EM: Round [258] log likelihood: -1705816.915125
EM: Round [259] log likelihood: -1705816.914814
EM: Round [260] log likelihood: -1705816.914507
EM: Round [261] log likelihood: -1705816.914204
EM: Round [262] log likelihood: -1705816.913906
EM: Round [263] log likelihood: -1705816.913612
EM: Round [264] log likelihood: -1705816.913322
EM: Round [265] log likelihood: -1705816.913036
EM: Round [266] log likelihood: -1705816.912754
EM: Round [267] log likelihood: -1705816.912476
EM: Round [268] log likelihood: -1705816.912203
EM: Round [269] log likelihood: -1705816.911933
EM: Round [270] log likelihood: -1705816.911666
EM: Round [271] log likelihood: -1705816.911404
EM: Round [272] log likelihood: -1705816.911145
EM: Round [273] log likelihood: -1705816.910890
EM: Round [274] log likelihood: -1705816.910639
EM: Round [275] log likelihood: -1705816.910391
EM: Round [276] log likelihood: -1705816.910146
EM: Round [277] log likelihood: -1705816.909905
EM: Round [278] log likelihood: -1705816.909667
EM: Round [279] log likelihood: -1705816.909433
EM: Round [280] log likelihood: -1705816.909201
EM: Round [281] log likelihood: -1705816.908973
EM: Round [282] log likelihood: -1705816.908749
EM: Round [283] log likelihood: -1705816.908527
EM: Round [284] log likelihood: -1705816.908308
EM: Round [285] log likelihood: -1705816.908092
EM: Round [286] log likelihood: -1705816.907880
EM: Round [287] log likelihood: -1705816.907670
EM: Round [288] log likelihood: -1705816.907463
EM: Round [289] log likelihood: -1705816.907259
EM: Round [290] log likelihood: -1705816.907057
EM: Round [291] log likelihood: -1705816.906859
EM: Round [292] log likelihood: -1705816.906663
EM: Round [293] log likelihood: -1705816.906470
EM: Round [294] log likelihood: -1705816.906279
EM: Round [295] log likelihood: -1705816.906091
EM: Round [296] log likelihood: -1705816.905906
EM: Round [297] log likelihood: -1705816.905723
EM: Round [298] log likelihood: -1705816.905543
EM: Round [299] log likelihood: -1705816.905365
EM: Round [300] log likelihood: -1705816.905189
EM: Round [301] log likelihood: -1705816.905016
EM: Round [302] log likelihood: -1705816.904845
EM: Round [303] log likelihood: -1705816.904676
EM: Round [304] log likelihood: -1705816.904510
EM: Round [305] log likelihood: -1705816.904346
EM: Round [306] log likelihood: -1705816.904184
EM: Round [307] log likelihood: -1705816.904024
EM: Round [308] log likelihood: -1705816.903866
EM: Round [309] log likelihood: -1705816.903711
EM: Round [310] log likelihood: -1705816.903558
EM: Round [311] log likelihood: -1705816.903406
EM: Round [312] log likelihood: -1705816.903257
EM: Round [313] log likelihood: -1705816.903109
EM: Round [314] log likelihood: -1705816.902964
EM: Round [315] log likelihood: -1705816.902821
EM: Round [316] log likelihood: -1705816.902679
EM: Round [317] log likelihood: -1705816.902539
EM: Round [318] log likelihood: -1705816.902401
EM: Round [319] log likelihood: -1705816.902265
EM: Round [320] log likelihood: -1705816.902131
EM: Round [321] log likelihood: -1705816.901999
EM: Round [322] log likelihood: -1705816.901868
EM: Round [323] log likelihood: -1705816.901739
EM: Round [324] log likelihood: -1705816.901611
EM: Round [325] log likelihood: -1705816.901486
EM: Round [326] log likelihood: -1705816.901362
EM: Round [327] log likelihood: -1705816.901239
EM: Round [328] log likelihood: -1705816.901119
EM: Round [329] log likelihood: -1705816.900999
EM: Round [330] log likelihood: -1705816.900882
EM: Round [331] log likelihood: -1705816.900766
EM: Round [332] log likelihood: -1705816.900651
EM: Round [333] log likelihood: -1705816.900538
EM: Round [334] log likelihood: -1705816.900426
EM: Round [335] log likelihood: -1705816.900316
EM: Round [336] log likelihood: -1705816.900208
EM: Round [337] log likelihood: -1705816.900100
EM: Round [338] log likelihood: -1705816.899994
EM: Round [339] log likelihood: -1705816.899890
EM: Round [340] log likelihood: -1705816.899787
EM: Round [341] log likelihood: -1705816.899685
EM: Round [342] log likelihood: -1705816.899584
EM: Round [343] log likelihood: -1705816.899485
EM: Stopping iterations at round 343 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -1693368.302072
EM: Round [1] log likelihood: -1692882.920095
EM: Round [2] log likelihood: -1692736.370697
EM: Round [3] log likelihood: -1692672.107480
EM: Round [4] log likelihood: -1692639.421916
EM: Round [5] log likelihood: -1692621.127312
EM: Round [6] log likelihood: -1692610.119699
EM: Round [7] log likelihood: -1692603.086627
EM: Round [8] log likelihood: -1692598.355166
EM: Round [9] log likelihood: -1692595.027667
EM: Round [10] log likelihood: -1692592.597065
EM: Round [11] log likelihood: -1692590.763486
EM: Round [12] log likelihood: -1692589.342081
EM: Round [13] log likelihood: -1692588.214548
EM: Round [14] log likelihood: -1692587.302553
EM: Round [15] log likelihood: -1692586.552622
EM: Round [16] log likelihood: -1692585.927227
EM: Round [17] log likelihood: -1692585.399376
EM: Round [18] log likelihood: -1692584.949217
EM: Round [19] log likelihood: -1692584.561855
EM: Round [20] log likelihood: -1692584.225913
EM: Round [21] log likelihood: -1692583.932556
EM: Round [22] log likelihood: -1692583.674825
EM: Round [23] log likelihood: -1692583.447161
EM: Round [24] log likelihood: -1692583.245076
EM: Round [25] log likelihood: -1692583.064904
EM: Round [26] log likelihood: -1692582.903621
EM: Round [27] log likelihood: -1692582.758711
EM: Round [28] log likelihood: -1692582.628065
EM: Round [29] log likelihood: -1692582.509904
EM: Round [30] log likelihood: -1692582.402714
EM: Round [31] log likelihood: -1692582.305202
EM: Round [32] log likelihood: -1692582.216256
EM: Round [33] log likelihood: -1692582.134918
EM: Round [34] log likelihood: -1692582.060357
EM: Round [35] log likelihood: -1692581.991848
EM: Round [36] log likelihood: -1692581.928760
EM: Round [37] log likelihood: -1692581.870539
EM: Round [38] log likelihood: -1692581.816697
EM: Round [39] log likelihood: -1692581.766807
EM: Round [40] log likelihood: -1692581.720489
EM: Round [41] log likelihood: -1692581.677405
EM: Round [42] log likelihood: -1692581.637259
EM: Round [43] log likelihood: -1692581.599784
EM: Round [44] log likelihood: -1692581.564744
EM: Round [45] log likelihood: -1692581.531926
EM: Round [46] log likelihood: -1692581.501141
EM: Round [47] log likelihood: -1692581.472218
EM: Round [48] log likelihood: -1692581.445005
EM: Round [49] log likelihood: -1692581.419364
EM: Round [50] log likelihood: -1692581.395171
EM: Round [51] log likelihood: -1692581.372313
EM: Round [52] log likelihood: -1692581.350689
EM: Round [53] log likelihood: -1692581.330207
EM: Round [54] log likelihood: -1692581.310783
EM: Round [55] log likelihood: -1692581.292342
EM: Round [56] log likelihood: -1692581.274813
EM: Round [57] log likelihood: -1692581.258134
EM: Round [58] log likelihood: -1692581.242248
EM: Round [59] log likelihood: -1692581.227101
EM: Round [60] log likelihood: -1692581.212645
EM: Round [61] log likelihood: -1692581.198836
EM: Round [62] log likelihood: -1692581.185634
EM: Round [63] log likelihood: -1692581.172999
EM: Round [64] log likelihood: -1692581.160899
EM: Round [65] log likelihood: -1692581.149302
EM: Round [66] log likelihood: -1692581.138177
EM: Round [67] log likelihood: -1692581.127497
EM: Round [68] log likelihood: -1692581.117238
EM: Round [69] log likelihood: -1692581.107376
EM: Round [70] log likelihood: -1692581.097889
EM: Round [71] log likelihood: -1692581.088757
EM: Round [72] log likelihood: -1692581.079962
EM: Round [73] log likelihood: -1692581.071485
EM: Round [74] log likelihood: -1692581.063311
EM: Round [75] log likelihood: -1692581.055424
EM: Round [76] log likelihood: -1692581.047809
EM: Round [77] log likelihood: -1692581.040454
EM: Round [78] log likelihood: -1692581.033347
EM: Round [79] log likelihood: -1692581.026474
EM: Round [80] log likelihood: -1692581.019826
EM: Round [81] log likelihood: -1692581.013391
EM: Round [82] log likelihood: -1692581.007161
EM: Round [83] log likelihood: -1692581.001125
EM: Round [84] log likelihood: -1692580.995276
EM: Round [85] log likelihood: -1692580.989605
EM: Round [86] log likelihood: -1692580.984105
EM: Round [87] log likelihood: -1692580.978768
EM: Round [88] log likelihood: -1692580.973587
EM: Round [89] log likelihood: -1692580.968556
EM: Round [90] log likelihood: -1692580.963669
EM: Round [91] log likelihood: -1692580.958920
EM: Round [92] log likelihood: -1692580.954303
EM: Round [93] log likelihood: -1692580.949814
EM: Round [94] log likelihood: -1692580.945447
EM: Round [95] log likelihood: -1692580.941197
EM: Round [96] log likelihood: -1692580.937061
EM: Round [97] log likelihood: -1692580.933033
EM: Round [98] log likelihood: -1692580.929110
EM: Round [99] log likelihood: -1692580.925288
EM: Round [100] log likelihood: -1692580.921563
EM: Round [101] log likelihood: -1692580.917932
EM: Round [102] log likelihood: -1692580.914392
EM: Round [103] log likelihood: -1692580.910939
EM: Round [104] log likelihood: -1692580.907569
EM: Round [105] log likelihood: -1692580.904282
EM: Round [106] log likelihood: -1692580.901073
EM: Round [107] log likelihood: -1692580.897939
EM: Round [108] log likelihood: -1692580.894880
EM: Round [109] log likelihood: -1692580.891891
EM: Round [110] log likelihood: -1692580.888971
EM: Round [111] log likelihood: -1692580.886117
EM: Round [112] log likelihood: -1692580.883328
EM: Round [113] log likelihood: -1692580.880601
EM: Round [114] log likelihood: -1692580.877934
EM: Round [115] log likelihood: -1692580.875326
EM: Round [116] log likelihood: -1692580.872775
EM: Round [117] log likelihood: -1692580.870279
EM: Round [118] log likelihood: -1692580.867836
EM: Round [119] log likelihood: -1692580.865445
EM: Round [120] log likelihood: -1692580.863104
EM: Round [121] log likelihood: -1692580.860812
EM: Round [122] log likelihood: -1692580.858567
EM: Round [123] log likelihood: -1692580.856369
EM: Round [124] log likelihood: -1692580.854215
EM: Round [125] log likelihood: -1692580.852104
EM: Round [126] log likelihood: -1692580.850036
EM: Round [127] log likelihood: -1692580.848009
EM: Round [128] log likelihood: -1692580.846022
EM: Round [129] log likelihood: -1692580.844074
EM: Round [130] log likelihood: -1692580.842164
EM: Round [131] log likelihood: -1692580.840291
EM: Round [132] log likelihood: -1692580.838454
EM: Round [133] log likelihood: -1692580.836651
EM: Round [134] log likelihood: -1692580.834883
EM: Round [135] log likelihood: -1692580.833148
EM: Round [136] log likelihood: -1692580.831446
EM: Round [137] log likelihood: -1692580.829775
EM: Round [138] log likelihood: -1692580.828135
EM: Round [139] log likelihood: -1692580.826524
EM: Round [140] log likelihood: -1692580.824944
EM: Round [141] log likelihood: -1692580.823391
EM: Round [142] log likelihood: -1692580.821867
EM: Round [143] log likelihood: -1692580.820370
EM: Round [144] log likelihood: -1692580.818900
EM: Round [145] log likelihood: -1692580.817455
EM: Round [146] log likelihood: -1692580.816036
EM: Round [147] log likelihood: -1692580.814642
EM: Round [148] log likelihood: -1692580.813272
EM: Round [149] log likelihood: -1692580.811925
EM: Round [150] log likelihood: -1692580.810602
EM: Round [151] log likelihood: -1692580.809301
EM: Round [152] log likelihood: -1692580.808023
EM: Round [153] log likelihood: -1692580.806766
EM: Round [154] log likelihood: -1692580.805530
EM: Round [155] log likelihood: -1692580.804315
EM: Round [156] log likelihood: -1692580.803121
EM: Round [157] log likelihood: -1692580.801946
EM: Round [158] log likelihood: -1692580.800790
EM: Round [159] log likelihood: -1692580.799654
EM: Round [160] log likelihood: -1692580.798536
EM: Round [161] log likelihood: -1692580.797437
EM: Round [162] log likelihood: -1692580.796355
EM: Round [163] log likelihood: -1692580.795291
EM: Round [164] log likelihood: -1692580.794243
EM: Round [165] log likelihood: -1692580.793213
EM: Round [166] log likelihood: -1692580.792199
EM: Round [167] log likelihood: -1692580.791201
EM: Round [168] log likelihood: -1692580.790219
EM: Round [169] log likelihood: -1692580.789253
EM: Round [170] log likelihood: -1692580.788301
EM: Round [171] log likelihood: -1692580.787365
EM: Round [172] log likelihood: -1692580.786443
EM: Round [173] log likelihood: -1692580.785536
EM: Round [174] log likelihood: -1692580.784642
EM: Round [175] log likelihood: -1692580.783762
EM: Round [176] log likelihood: -1692580.782896
EM: Round [177] log likelihood: -1692580.782043
EM: Round [178] log likelihood: -1692580.781203
EM: Round [179] log likelihood: -1692580.780376
EM: Round [180] log likelihood: -1692580.779561
EM: Round [181] log likelihood: -1692580.778759
EM: Round [182] log likelihood: -1692580.777969
EM: Round [183] log likelihood: -1692580.777190
EM: Round [184] log likelihood: -1692580.776424
EM: Round [185] log likelihood: -1692580.775669
EM: Round [186] log likelihood: -1692580.774924
EM: Round [187] log likelihood: -1692580.774191
EM: Round [188] log likelihood: -1692580.773469
EM: Round [189] log likelihood: -1692580.772758
EM: Round [190] log likelihood: -1692580.772057
EM: Round [191] log likelihood: -1692580.771366
EM: Round [192] log likelihood: -1692580.770685
EM: Round [193] log likelihood: -1692580.770015
EM: Round [194] log likelihood: -1692580.769354
EM: Round [195] log likelihood: -1692580.768702
EM: Round [196] log likelihood: -1692580.768060
EM: Round [197] log likelihood: -1692580.767428
EM: Round [198] log likelihood: -1692580.766804
EM: Round [199] log likelihood: -1692580.766189
EM: Round [200] log likelihood: -1692580.765583
EM: Round [201] log likelihood: -1692580.764986
EM: Round [202] log likelihood: -1692580.764398
EM: Round [203] log likelihood: -1692580.763817
EM: Round [204] log likelihood: -1692580.763245
EM: Round [205] log likelihood: -1692580.762681
EM: Round [206] log likelihood: -1692580.762125
EM: Round [207] log likelihood: -1692580.761577
EM: Round [208] log likelihood: -1692580.761037
EM: Round [209] log likelihood: -1692580.760504
EM: Round [210] log likelihood: -1692580.759979
EM: Round [211] log likelihood: -1692580.759461
EM: Round [212] log likelihood: -1692580.758950
EM: Round [213] log likelihood: -1692580.758446
EM: Round [214] log likelihood: -1692580.757949
EM: Round [215] log likelihood: -1692580.757460
EM: Round [216] log likelihood: -1692580.756977
EM: Round [217] log likelihood: -1692580.756500
EM: Round [218] log likelihood: -1692580.756031
EM: Round [219] log likelihood: -1692580.755567
EM: Round [220] log likelihood: -1692580.755110
EM: Round [221] log likelihood: -1692580.754660
EM: Round [222] log likelihood: -1692580.754215
EM: Round [223] log likelihood: -1692580.753777
EM: Round [224] log likelihood: -1692580.753344
EM: Round [225] log likelihood: -1692580.752918
EM: Round [226] log likelihood: -1692580.752497
EM: Round [227] log likelihood: -1692580.752082
EM: Round [228] log likelihood: -1692580.751673
EM: Round [229] log likelihood: -1692580.751269
EM: Round [230] log likelihood: -1692580.750871
EM: Round [231] log likelihood: -1692580.750478
EM: Round [232] log likelihood: -1692580.750090
EM: Round [233] log likelihood: -1692580.749708
EM: Round [234] log likelihood: -1692580.749330
EM: Round [235] log likelihood: -1692580.748958
EM: Round [236] log likelihood: -1692580.748591
EM: Round [237] log likelihood: -1692580.748228
EM: Round [238] log likelihood: -1692580.747871
EM: Round [239] log likelihood: -1692580.747518
EM: Round [240] log likelihood: -1692580.747170
EM: Round [241] log likelihood: -1692580.746827
EM: Round [242] log likelihood: -1692580.746488
EM: Round [243] log likelihood: -1692580.746153
EM: Round [244] log likelihood: -1692580.745823
EM: Round [245] log likelihood: -1692580.745498
EM: Round [246] log likelihood: -1692580.745177
EM: Round [247] log likelihood: -1692580.744860
EM: Round [248] log likelihood: -1692580.744547
EM: Round [249] log likelihood: -1692580.744238
EM: Round [250] log likelihood: -1692580.743934
EM: Round [251] log likelihood: -1692580.743633
EM: Round [252] log likelihood: -1692580.743336
EM: Round [253] log likelihood: -1692580.743044
EM: Round [254] log likelihood: -1692580.742755
EM: Round [255] log likelihood: -1692580.742470
EM: Round [256] log likelihood: -1692580.742188
EM: Round [257] log likelihood: -1692580.741910
EM: Round [258] log likelihood: -1692580.741636
EM: Round [259] log likelihood: -1692580.741366
EM: Round [260] log likelihood: -1692580.741099
EM: Round [261] log likelihood: -1692580.740835
EM: Round [262] log likelihood: -1692580.740575
EM: Round [263] log likelihood: -1692580.740319
EM: Round [264] log likelihood: -1692580.740065
EM: Round [265] log likelihood: -1692580.739815
EM: Round [266] log likelihood: -1692580.739568
EM: Round [267] log likelihood: -1692580.739325
EM: Round [268] log likelihood: -1692580.739084
EM: Round [269] log likelihood: -1692580.738847
EM: Round [270] log likelihood: -1692580.738612
EM: Round [271] log likelihood: -1692580.738381
EM: Round [272] log likelihood: -1692580.738153
EM: Round [273] log likelihood: -1692580.737927
EM: Round [274] log likelihood: -1692580.737705
EM: Round [275] log likelihood: -1692580.737485
EM: Round [276] log likelihood: -1692580.737269
EM: Round [277] log likelihood: -1692580.737054
EM: Round [278] log likelihood: -1692580.736843
EM: Round [279] log likelihood: -1692580.736635
EM: Round [280] log likelihood: -1692580.736429
EM: Round [281] log likelihood: -1692580.736226
EM: Round [282] log likelihood: -1692580.736025
EM: Round [283] log likelihood: -1692580.735827
EM: Round [284] log likelihood: -1692580.735631
EM: Round [285] log likelihood: -1692580.735438
EM: Round [286] log likelihood: -1692580.735248
EM: Round [287] log likelihood: -1692580.735060
EM: Round [288] log likelihood: -1692580.734874
EM: Round [289] log likelihood: -1692580.734690
EM: Round [290] log likelihood: -1692580.734509
EM: Round [291] log likelihood: -1692580.734331
EM: Round [292] log likelihood: -1692580.734154
EM: Round [293] log likelihood: -1692580.733980
EM: Round [294] log likelihood: -1692580.733808
EM: Round [295] log likelihood: -1692580.733638
EM: Round [296] log likelihood: -1692580.733470
EM: Round [297] log likelihood: -1692580.733305
EM: Round [298] log likelihood: -1692580.733141
EM: Round [299] log likelihood: -1692580.732980
EM: Round [300] log likelihood: -1692580.732821
EM: Round [301] log likelihood: -1692580.732663
EM: Round [302] log likelihood: -1692580.732508
EM: Round [303] log likelihood: -1692580.732355
EM: Round [304] log likelihood: -1692580.732203
EM: Round [305] log likelihood: -1692580.732054
EM: Round [306] log likelihood: -1692580.731906
EM: Round [307] log likelihood: -1692580.731760
EM: Round [308] log likelihood: -1692580.731616
EM: Round [309] log likelihood: -1692580.731474
EM: Round [310] log likelihood: -1692580.731334
EM: Round [311] log likelihood: -1692580.731195
EM: Round [312] log likelihood: -1692580.731058
EM: Round [313] log likelihood: -1692580.730923
EM: Round [314] log likelihood: -1692580.730790
EM: Round [315] log likelihood: -1692580.730658
EM: Round [316] log likelihood: -1692580.730528
EM: Round [317] log likelihood: -1692580.730400
EM: Round [318] log likelihood: -1692580.730273
EM: Round [319] log likelihood: -1692580.730147
EM: Round [320] log likelihood: -1692580.730024
EM: Round [321] log likelihood: -1692580.729902
EM: Round [322] log likelihood: -1692580.729781
EM: Round [323] log likelihood: -1692580.729662
EM: Round [324] log likelihood: -1692580.729544
EM: Round [325] log likelihood: -1692580.729428
EM: Round [326] log likelihood: -1692580.729314
EM: Round [327] log likelihood: -1692580.729200
EM: Round [328] log likelihood: -1692580.729088
EM: Round [329] log likelihood: -1692580.728978
EM: Round [330] log likelihood: -1692580.728869
EM: Round [331] log likelihood: -1692580.728761
EM: Round [332] log likelihood: -1692580.728655
EM: Round [333] log likelihood: -1692580.728550
EM: Round [334] log likelihood: -1692580.728446
EM: Round [335] log likelihood: -1692580.728344
EM: Round [336] log likelihood: -1692580.728243
EM: Round [337] log likelihood: -1692580.728143
EM: Stopping iterations at round 337 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 294950005 > /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir > /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir --annotate /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir
-done, see /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1880, filtered: 7711)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.d2Y6gfnuWk/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.d2Y6gfnuWk/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000226167.1]
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WARNING, no entry stored in dbm for [ENSG00000189136.9]
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WARNING, no entry stored in dbm for [ENSG00000226823.1]
WARNING, no entry stored in dbm for [ENSG00000228072.1]
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WARNING, no entry stored in dbm for [ENSG00000286245.1]
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WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000287367.1]
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WARNING, no entry stored in dbm for [ENSG00000273609.1]
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WARNING, no entry stored in dbm for [ENSG00000250863.2]
WARNING, no entry stored in dbm for [ENSG00000254453.1]
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WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000231234.2]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000226930.1]
WARNING, no entry stored in dbm for [ENSG00000244265.2]
WARNING, no entry stored in dbm for [ENSG00000239265.5]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000225018.1]
WARNING, no entry stored in dbm for [ENSG00000224523.1]
WARNING, no entry stored in dbm for [ENSG00000248445.5]
WARNING, no entry stored in dbm for [ENSG00000279497.1]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000250284.3]
WARNING, no entry stored in dbm for [ENSG00000223559.1]
WARNING, no entry stored in dbm for [ENSG00000286856.1]
WARNING, no entry stored in dbm for [ENSG00000288087.1]
WARNING, no entry stored in dbm for [ENSG00000288087.1]
WARNING, no entry stored in dbm for [ENSG00000239694.1]
WARNING, no entry stored in dbm for [ENSG00000213621.3]
WARNING, no entry stored in dbm for [ENSG00000233206.1]
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WARNING, no entry stored in dbm for [ENSG00000060303.5]
WARNING, no entry stored in dbm for [ENSG00000217067.2]
WARNING, no entry stored in dbm for [ENSG00000224683.1]
WARNING, no entry stored in dbm for [ENSG00000231409.3]
WARNING, no entry stored in dbm for [ENSG00000213872.3]
WARNING, no entry stored in dbm for [ENSG00000259459.6]
WARNING, no entry stored in dbm for [ENSG00000236264.5]
WARNING, no entry stored in dbm for [ENSG00000213178.3]
WARNING, no entry stored in dbm for [ENSG00000218300.1]
WARNING, no entry stored in dbm for [ENSG00000225661.7]
WARNING, no entry stored in dbm for [ENSG00000139239.7]
WARNING, no entry stored in dbm for [ENSG00000269609.6]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000228248.1]
WARNING, no entry stored in dbm for [ENSG00000267279.2]
WARNING, no entry stored in dbm for [ENSG00000265078.2]
WARNING, no entry stored in dbm for [ENSG00000286933.1]
WARNING, no entry stored in dbm for [ENSG00000240606.3]
WARNING, no entry stored in dbm for [ENSG00000286933.1]
WARNING, no entry stored in dbm for [ENSG00000242559.3]
WARNING, no entry stored in dbm for [ENSG00000286933.1]
WARNING, no entry stored in dbm for [ENSG00000202406.1]
WARNING, no entry stored in dbm for [ENSG00000201758.1]
WARNING, no entry stored in dbm for [ENSG00000202406.1]
WARNING, no entry stored in dbm for [ENSG00000287576.1]
WARNING, no entry stored in dbm for [ENSG00000268027.5]
WARNING, no entry stored in dbm for [ENSG00000236552.2]
WARNING, no entry stored in dbm for [ENSG00000269653.1]
WARNING, no entry stored in dbm for [ENSG00000231784.8]
WARNING, no entry stored in dbm for [ENSG00000204253.4]
WARNING, no entry stored in dbm for [ENSG00000271937.1]
WARNING, no entry stored in dbm for [ENSG00000242894.3]
WARNING, no entry stored in dbm for [ENSG00000243323.7]
WARNING, no entry stored in dbm for [ENSG00000268543.1]
WARNING, no entry stored in dbm for [ENSG00000257376.1]
WARNING, no entry stored in dbm for [ENSG00000279693.1]
WARNING, no entry stored in dbm for [ENSG00000259977.1]
WARNING, no entry stored in dbm for [ENSG00000239636.1]
WARNING, no entry stored in dbm for [ENSG00000237248.5]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000205578.6]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000243663.1]
WARNING, no entry stored in dbm for [ENSG00000254211.6]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000189212.12]
WARNING, no entry stored in dbm for [ENSG00000168967.14]
WARNING, no entry stored in dbm for [ENSG00000175147.13]
WARNING, no entry stored in dbm for [ENSG00000230051.2]
WARNING, no entry stored in dbm for [ENSG00000269800.1]
WARNING, no entry stored in dbm for [ENSG00000180539.8]
WARNING, no entry stored in dbm for [ENSG00000226521.7]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000241684.6]
WARNING, no entry stored in dbm for [ENSG00000224729.6]
WARNING, no entry stored in dbm for [ENSG00000263327.6]
WARNING, no entry stored in dbm for [ENSG00000247774.7]
WARNING, no entry stored in dbm for [ENSG00000254846.1]
WARNING, no entry stored in dbm for [ENSG00000286614.1]
WARNING, no entry stored in dbm for [ENSG00000223553.6]
WARNING, no entry stored in dbm for [ENSG00000274605.2]
WARNING, no entry stored in dbm for [ENSG00000253438.4]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000261693.1]
WARNING, no entry stored in dbm for [ENSG00000225484.7]
WARNING, no entry stored in dbm for [ENSG00000271121.2]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000238755.3]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000251259.1]
WARNING, no entry stored in dbm for [ENSG00000264112.1]
WARNING, no entry stored in dbm for [ENSG00000247809.9]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000261183.5]
WARNING, no entry stored in dbm for [ENSG00000247679.3]
WARNING, no entry stored in dbm for [ENSG00000253553.7]
WARNING, no entry stored in dbm for [ENSG00000234226.5]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000123201.14]
WARNING, no entry stored in dbm for [ENSG00000243424.2]
WARNING, no entry stored in dbm for [ENSG00000264235.6]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000241772.2]
WARNING, no entry stored in dbm for [ENSG00000254132.1]
WARNING, no entry stored in dbm for [ENSG00000264697.1]
WARNING, no entry stored in dbm for [ENSG00000233929.1]
WARNING, no entry stored in dbm for [ENSG00000210194.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000249328.3]
WARNING, no entry stored in dbm for [ENSG00000228782.7]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000269929.3]
WARNING, no entry stored in dbm for [ENSG00000267374.2]
WARNING, no entry stored in dbm for [ENSG00000283805.1]
WARNING, no entry stored in dbm for [ENSG00000283805.1]
WARNING, no entry stored in dbm for [ENSG00000280287.1]
WARNING, no entry stored in dbm for [ENSG00000259240.1]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000284481.1]
WARNING, no entry stored in dbm for [ENSG00000250230.3]
WARNING, no entry stored in dbm for [ENSG00000258414.1]
WARNING, no entry stored in dbm for [ENSG00000233325.3]
WARNING, no entry stored in dbm for [ENSG00000225873.4]
WARNING, no entry stored in dbm for [ENSG00000233369.7]
WARNING, no entry stored in dbm for [ENSG00000248977.1]
WARNING, no entry stored in dbm for [ENSG00000238121.6]
WARNING, no entry stored in dbm for [ENSG00000246331.2]
WARNING, no entry stored in dbm for [ENSG00000243742.5]
WARNING, no entry stored in dbm for [ENSG00000244932.2]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000267278.6]
WARNING, no entry stored in dbm for [ENSG00000267278.6]
WARNING, no entry stored in dbm for [ENSG00000253223.1]
WARNING, no entry stored in dbm for [ENSG00000258445.3]
WARNING, no entry stored in dbm for [ENSG00000271978.1]
WARNING, no entry stored in dbm for [ENSG00000288110.1]
WARNING, no entry stored in dbm for [ENSG00000231969.2]
WARNING, no entry stored in dbm for [ENSG00000231969.2]
WARNING, no entry stored in dbm for [ENSG00000235448.3]
WARNING, no entry stored in dbm for [ENSG00000206573.9]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000275681.1]
WARNING, no entry stored in dbm for [ENSG00000224944.2]
WARNING, no entry stored in dbm for [ENSG00000263142.5]
WARNING, no entry stored in dbm for [ENSG00000271013.1]
WARNING, no entry stored in dbm for [ENSG00000286021.2]
WARNING, no entry stored in dbm for [ENSG00000223566.1]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000251323.3]
WARNING, no entry stored in dbm for [ENSG00000258819.2]
WARNING, no entry stored in dbm for [ENSG00000228248.1]
WARNING, no entry stored in dbm for [ENSG00000225930.4]
WARNING, no entry stored in dbm for [ENSG00000225855.7]
WARNING, no entry stored in dbm for [ENSG00000234634.2]
WARNING, no entry stored in dbm for [ENSG00000262188.2]
WARNING, no entry stored in dbm for [ENSG00000251675.1]
WARNING, no entry stored in dbm for [ENSG00000224655.7]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000233901.6]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000260468.1]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000232903.2]
WARNING, no entry stored in dbm for [ENSG00000253819.2]
WARNING, no entry stored in dbm for [ENSG00000274020.4]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000212694.8]
WARNING, no entry stored in dbm for [ENSG00000224559.2]
WARNING, no entry stored in dbm for [ENSG00000189196.4]
WARNING, no entry stored in dbm for [ENSG00000248663.6]
WARNING, no entry stored in dbm for [ENSG00000249797.2]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000214145.7]
WARNING, no entry stored in dbm for [ENSG00000277147.6]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000227060.7]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000234353.2]
WARNING, no entry stored in dbm for [ENSG00000245849.8]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000237716.2]
WARNING, no entry stored in dbm for [ENSG00000214659.4]
WARNING, no entry stored in dbm for [ENSG00000260731.1]
WARNING, no entry stored in dbm for [ENSG00000239569.3]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000283064.1]
WARNING, no entry stored in dbm for [ENSG00000267313.7]
WARNING, no entry stored in dbm for [ENSG00000267313.7]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000288172.1]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000286349.1]
WARNING, no entry stored in dbm for [ENSG00000233016.7]
WARNING, no entry stored in dbm for [ENSG00000276975.3]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000236205.1]
WARNING, no entry stored in dbm for [ENSG00000214223.4]
WARNING, no entry stored in dbm for [ENSG00000213650.3]
WARNING, no entry stored in dbm for [ENSG00000235734.4]
WARNING, no entry stored in dbm for [ENSG00000247911.3]
WARNING, no entry stored in dbm for [ENSG00000234705.2]
WARNING, no entry stored in dbm for [ENSG00000245482.2]
WARNING, no entry stored in dbm for [ENSG00000237125.11]
WARNING, no entry stored in dbm for [ENSG00000250708.2]
WARNING, no entry stored in dbm for [ENSG00000225177.6]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000261716.2]
WARNING, no entry stored in dbm for [ENSG00000253816.3]
WARNING, no entry stored in dbm for [ENSG00000224458.3]
WARNING, no entry stored in dbm for [ENSG00000206120.11]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000254031.6]
WARNING, no entry stored in dbm for [ENSG00000228847.1]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000224846.3]
WARNING, no entry stored in dbm for [ENSG00000272396.1]
WARNING, no entry stored in dbm for [ENSG00000262529.1]
WARNING, no entry stored in dbm for [ENSG00000254024.1]
WARNING, no entry stored in dbm for [ENSG00000225489.7]
WARNING, no entry stored in dbm for [ENSG00000267529.3]
WARNING, no entry stored in dbm for [ENSG00000276722.1]
WARNING, no entry stored in dbm for [ENSG00000223361.5]
WARNING, no entry stored in dbm for [ENSG00000287621.1]
WARNING, no entry stored in dbm for [ENSG00000237491.10]
WARNING, no entry stored in dbm for [ENSG00000231501.1]
WARNING, no entry stored in dbm for [ENSG00000248360.7]
WARNING, no entry stored in dbm for [ENSG00000251379.1]
WARNING, no entry stored in dbm for [ENSG00000248138.5]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000231765.1]
WARNING, no entry stored in dbm for [ENSG00000225393.1]
WARNING, no entry stored in dbm for [ENSG00000246339.6]
WARNING, no entry stored in dbm for [ENSG00000216754.2]
WARNING, no entry stored in dbm for [ENSG00000256690.1]
WARNING, no entry stored in dbm for [ENSG00000267383.7]
WARNING, no entry stored in dbm for [ENSG00000255145.3]
WARNING, no entry stored in dbm for [ENSG00000161103.11]
WARNING, no entry stored in dbm for [ENSG00000224032.7]
WARNING, no entry stored in dbm for [ENSG00000223797.6]
WARNING, no entry stored in dbm for [ENSG00000280739.3]
WARNING, no entry stored in dbm for [ENSG00000259032.2]
WARNING, no entry stored in dbm for [ENSG00000227304.3]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000239523.6]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000235904.3]
WARNING, no entry stored in dbm for [ENSG00000269352.1]
WARNING, no entry stored in dbm for [ENSG00000250539.1]
WARNING, no entry stored in dbm for [ENSG00000228887.3]
WARNING, no entry stored in dbm for [ENSG00000229280.1]
WARNING, no entry stored in dbm for [ENSG00000224963.3]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000240023.1]
WARNING, no entry stored in dbm for [ENSG00000234608.8]
WARNING, no entry stored in dbm for [ENSG00000279945.1]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000267379.1]
WARNING, no entry stored in dbm for [ENSG00000237883.2]
WARNING, no entry stored in dbm for [ENSG00000278428.1]
WARNING, no entry stored in dbm for [ENSG00000231871.5]
WARNING, no entry stored in dbm for [ENSG00000267586.7]
WARNING, no entry stored in dbm for [ENSG00000233514.1]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000234273.1]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000271711.1]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000229688.8]
WARNING, no entry stored in dbm for [ENSG00000080947.15]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000210140.1]
WARNING, no entry stored in dbm for [ENSG00000270445.1]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000246695.8]
WARNING, no entry stored in dbm for [ENSG00000265630.2]
WARNING, no entry stored in dbm for [ENSG00000251138.7]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000242578.1]
WARNING, no entry stored in dbm for [ENSG00000242578.1]
WARNING, no entry stored in dbm for [ENSG00000258469.1]
WARNING, no entry stored in dbm for [ENSG00000287682.1]
WARNING, no entry stored in dbm for [ENSG00000153363.13]
WARNING, no entry stored in dbm for [ENSG00000215039.7]
WARNING, no entry stored in dbm for [ENSG00000176840.12]
WARNING, no entry stored in dbm for [ENSG00000228544.1]
WARNING, no entry stored in dbm for [ENSG00000233098.9]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000262837.1]
WARNING, no entry stored in dbm for [ENSG00000260942.1]
WARNING, no entry stored in dbm for [ENSG00000242814.2]
WARNING, no entry stored in dbm for [ENSG00000256663.1]
WARNING, no entry stored in dbm for [ENSG00000287151.1]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000279232.2]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000227288.3]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000287816.1]
WARNING, no entry stored in dbm for [ENSG00000225756.1]
WARNING, no entry stored in dbm for [ENSG00000269044.2]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000232139.6]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000224635.2]
WARNING, no entry stored in dbm for [ENSG00000254990.5]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000279742.1]
WARNING, no entry stored in dbm for [ENSG00000279742.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000217165.1]
WARNING, no entry stored in dbm for [ENSG00000276707.1]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000279179.1]
WARNING, no entry stored in dbm for [ENSG00000287168.1]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000231705.1]
WARNING, no entry stored in dbm for [ENSG00000234062.8]
WARNING, no entry stored in dbm for [ENSG00000277901.1]
WARNING, no entry stored in dbm for [ENSG00000237356.7]
WARNING, no entry stored in dbm for [ENSG00000247287.3]
WARNING, no entry stored in dbm for [ENSG00000260862.1]
WARNING, no entry stored in dbm for [ENSG00000284694.1]
WARNING, no entry stored in dbm for [ENSG00000259723.1]
WARNING, no entry stored in dbm for [ENSG00000285718.2]
WARNING, no entry stored in dbm for [ENSG00000228430.9]
WARNING, no entry stored in dbm for [ENSG00000247970.2]
WARNING, no entry stored in dbm for [ENSG00000227076.1]
WARNING, no entry stored in dbm for [ENSG00000280073.1]
WARNING, no entry stored in dbm for [ENSG00000259049.1]
WARNING, no entry stored in dbm for [ENSG00000259953.2]
WARNING, no entry stored in dbm for [ENSG00000287559.1]
WARNING, no entry stored in dbm for [ENSG00000227388.3]
WARNING, no entry stored in dbm for [ENSG00000288612.1]
WARNING, no entry stored in dbm for [ENSG00000286117.2]
WARNING, no entry stored in dbm for [ENSG00000273619.1]
WARNING, no entry stored in dbm for [ENSG00000232412.1]
WARNING, no entry stored in dbm for [ENSG00000287562.1]
WARNING, no entry stored in dbm for [ENSG00000238230.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000277967.1]
WARNING, no entry stored in dbm for [ENSG00000180581.7]
WARNING, no entry stored in dbm for [ENSG00000229853.1]
WARNING, no entry stored in dbm for [ENSG00000213060.4]
WARNING, no entry stored in dbm for [ENSG00000235605.1]
WARNING, no entry stored in dbm for [ENSG00000234869.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000237476.1]
WARNING, no entry stored in dbm for [ENSG00000226121.2]
WARNING, no entry stored in dbm for [ENSG00000287747.1]
WARNING, no entry stored in dbm for [ENSG00000253806.1]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000231535.7]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000286565.1]
WARNING, no entry stored in dbm for [ENSG00000213493.3]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000236583.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000274615.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000273598.1]
WARNING, no entry stored in dbm for [ENSG00000273598.1]
WARNING, no entry stored in dbm for [ENSG00000203635.2]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000260658.6]
WARNING, no entry stored in dbm for [ENSG00000260121.1]
WARNING, no entry stored in dbm for [ENSG00000254609.1]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000226268.3]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000249492.2]
WARNING, no entry stored in dbm for [ENSG00000260641.1]
WARNING, no entry stored in dbm for [ENSG00000241313.3]
WARNING, no entry stored in dbm for [ENSG00000228043.5]
WARNING, no entry stored in dbm for [ENSG00000218416.4]
WARNING, no entry stored in dbm for [ENSG00000262223.8]
WARNING, no entry stored in dbm for [ENSG00000250284.3]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000288075.1]
WARNING, no entry stored in dbm for [ENSG00000242282.6]
WARNING, no entry stored in dbm for [ENSG00000258130.8]
WARNING, no entry stored in dbm for [ENSG00000233987.2]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000231482.3]
WARNING, no entry stored in dbm for [ENSG00000228613.1]
WARNING, no entry stored in dbm for [ENSG00000260037.5]
WARNING, no entry stored in dbm for [ENSG00000238267.1]
WARNING, no entry stored in dbm for [ENSG00000254153.1]
WARNING, no entry stored in dbm for [ENSG00000254251.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000287676.1]
WARNING, no entry stored in dbm for [ENSG00000287724.1]
WARNING, no entry stored in dbm for [ENSG00000236358.1]
WARNING, no entry stored in dbm for [ENSG00000242396.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000272953.1]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000226291.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000265750.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000267801.1]
WARNING, no entry stored in dbm for [ENSG00000261392.1]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000254337.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000285744.1]
WARNING, no entry stored in dbm for [ENSG00000266820.1]
WARNING, no entry stored in dbm for [ENSG00000261776.1]
WARNING, no entry stored in dbm for [ENSG00000272742.1]
WARNING, no entry stored in dbm for [ENSG00000285679.2]
WARNING, no entry stored in dbm for [ENSG00000273329.1]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000226965.2]
WARNING, no entry stored in dbm for [ENSG00000236425.1]
WARNING, no entry stored in dbm for [ENSG00000213598.4]
WARNING, no entry stored in dbm for [ENSG00000228862.4]
WARNING, no entry stored in dbm for [ENSG00000287763.1]
WARNING, no entry stored in dbm for [ENSG00000287431.1]
WARNING, no entry stored in dbm for [ENSG00000137808.12]
WARNING, no entry stored in dbm for [ENSG00000279091.1]
WARNING, no entry stored in dbm for [ENSG00000286193.2]
WARNING, no entry stored in dbm for [ENSG00000251131.2]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000267277.1]
WARNING, no entry stored in dbm for [ENSG00000271870.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000279035.1]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000268296.2]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000267665.2]
WARNING, no entry stored in dbm for [ENSG00000261229.6]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000242858.1]
WARNING, no entry stored in dbm for [ENSG00000242858.1]
WARNING, no entry stored in dbm for [ENSG00000287858.1]
WARNING, no entry stored in dbm for [ENSG00000271333.1]
WARNING, no entry stored in dbm for [ENSG00000239498.1]
WARNING, no entry stored in dbm for [ENSG00000269982.1]
WARNING, no entry stored in dbm for [ENSG00000264920.2]
WARNING, no entry stored in dbm for [ENSG00000249406.3]
WARNING, no entry stored in dbm for [ENSG00000277146.1]
WARNING, no entry stored in dbm for [ENSG00000250616.2]
WARNING, no entry stored in dbm for [ENSG00000234773.7]
WARNING, no entry stored in dbm for [ENSG00000255106.1]
WARNING, no entry stored in dbm for [ENSG00000241741.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000257489.6]
WARNING, no entry stored in dbm for [ENSG00000256594.8]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000288585.1]
WARNING, no entry stored in dbm for [ENSG00000287500.1]
WARNING, no entry stored in dbm for [ENSG00000267727.1]
WARNING, no entry stored in dbm for [ENSG00000223725.6]
WARNING, no entry stored in dbm for [ENSG00000223725.6]
WARNING, no entry stored in dbm for [ENSG00000234902.6]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000286048.1]
WARNING, no entry stored in dbm for [ENSG00000249738.10]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000263963.1]
WARNING, no entry stored in dbm for [ENSG00000267815.1]
WARNING, no entry stored in dbm for [ENSG00000274525.1]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000244510.2]
WARNING, no entry stored in dbm for [ENSG00000239246.3]
WARNING, no entry stored in dbm for [ENSG00000261804.2]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000267131.1]
WARNING, no entry stored in dbm for [ENSG00000232006.9]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000233834.6]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000225792.2]
WARNING, no entry stored in dbm for [ENSG00000286923.1]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000255182.2]
WARNING, no entry stored in dbm for [ENSG00000239989.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000272601.1]
WARNING, no entry stored in dbm for [ENSG00000275719.1]
WARNING, no entry stored in dbm for [ENSG00000223559.1]
WARNING, no entry stored in dbm for [ENSG00000234967.2]
WARNING, no entry stored in dbm for [ENSG00000234967.2]


	* STAR-Fusion complete.  See output: /tmp/nxf.d2Y6gfnuWk/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)