[W::hts_idx_load3] The index file is older than the data file: 22Rv1_FFPE_RNA_0001_B23LG7FLT4_3.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	6794754
Known Splicing Events:	6664553
Partial Novel Splicing Events:	44844
Novel Splicing Events:	80103
Filtered Splicing Events:	5254

Total splicing  Junctions:	129832
Known Splicing Junctions:	120129
Partial Novel Splicing Junctions:	4565
Novel Splicing Junctions:	5138

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Create BED file ...
Create Interact file ...