AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 298
Pass (FILTER=PASS): 26 (8.7%)
Fail (FILTER=FAIL): 272 (91.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 103
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 40
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high): 13
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
Breakdown by confidence:
high: 26 pass, 2 fail (total: 28)
low: 0 pass, 127 fail (total: 127)
medium: 0 pass, 143 fail (total: 143)
Arriba filter: 298 rows -> 26 PASS; wrote 786-O_FFPE_RNA_0001_B23LG7FLT4_1.arriba.fusions.filtered.tsv and 786-O_FFPE_RNA_0001_B23LG7FLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 786-O_FFPE_RNA_0001_B23LG7FLT4_1.arriba.fusions.filter_summary.txt