.command.sh - Workdir - NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (A549_FFPE_01_RNA_0001_B23LG7FLT4_3)

File Info

Filename: .command.sh
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4c/1e8c84329913b02e6c4f4f09d23032/.command.sh
Size: 269 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (A549_FFPE_01_RNA_0001_B23LG7FLT4_3)
Attempt

Content

#!/bin/bash -euo pipefail
cancer_introns_to_vcf.py \
    --input A549_FFPE_01_RNA_0001_B23LG7FLT4_3.cancer.introns

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF":
    python: $(python --version | sed 's/Python //g')
END_VERSIONS