.command.sh - Workdir - NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (22Rv1_FFPE_RNA_0001_B23LG7FLT4_2)

File Info

Filename: .command.sh
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/a2130e091b88b4c256784a0faa1a94/.command.sh
Size: 267 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (22Rv1_FFPE_RNA_0001_B23LG7FLT4_2)
Attempt

Content

#!/bin/bash -euo pipefail
cancer_introns_to_vcf.py \
    --input 22Rv1_FFPE_RNA_0001_B23LG7FLT4_2.cancer.introns

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF":
    python: $(python --version | sed 's/Python //g')
END_VERSIONS