Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/b6575f37b6c71ec77189890c6a73c1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/b6575f37b6c71ec77189890c6a73c1/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/blacklist_breakpoint_database_2026-04-27.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/e211cac2da80f06c1ca61f70de9445/ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-f79a17a0-988d-46c3-a0fc-cc7f26b06d9c/2f/783d5e3fc4bb0e4fc378bb3e8b5e61/arriba_filter_config.yaml
==> STAGING COMPLETE (5 inputs)


================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 0
Arriba filter: 0 rows -> 0 PASS; wrote ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered.tsv and ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.filter_summary.txt