Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/15ba307c372b89d8e88e14c47b8483/U118MG_FFPE_RNA_0001_B23LG7FLT4_2_R1.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/6ee19520da5ead31addd500380ecd4/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/6ee19520da5ead31addd500380ecd4/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/15ba307c372b89d8e88e14c47b8483/U118MG_FFPE_RNA_0001_B23LG7FLT4_2_R2.fastq.gz ==> STAGING COMPLETE (4 inputs) ls: *.fail.fastq.gz: No such file or directory ls: *.merged.fastq.gz: No such file or directory