#==================================================
#All numbers are READ count
#==================================================

Total records:                          79642399

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        17757466
Unmapped reads:                         1056048
mapq < mapq_cut (non-unique):           4334111

mapq >= mapq_cut (unique):              56494774
Read-1:                                 28298302
Read-2:                                 28196472
Reads map to '+':                       28253255
Reads map to '-':                       28241519
Non-splice reads:                       43839913
Splice reads:                           12654861
Reads mapped in proper pairs:           56190498
Proper-paired reads map to different chrom:0