File Info

Filename
NTC_0001_0001_B23LG7FLT4_2.Log.final.out
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion_100M__5f1fa793--20260303-130000/star_for_starfusion/NTC_0001_0001_B23LG7FLT4_2.Log.final.out
Size
2.0 KB
Published
Mar 03, 2026 2:03 PM
                                 Started job on |	Mar 03 21:58:50
                             Started mapping on |	Mar 03 22:02:31
                                    Finished on |	Mar 03 22:03:11
       Mapping speed, Million of reads per hour |	103.25

                          Number of input reads |	1147200
                      Average input read length |	297
                                    UNIQUE READS:
                   Uniquely mapped reads number |	2598
                        Uniquely mapped reads % |	0.23%
                          Average mapped length |	166.29
                       Number of splices: Total |	528
            Number of splices: Annotated (sjdb) |	518
                       Number of splices: GT/AG |	520
                       Number of splices: GC/AG |	8
                       Number of splices: AT/AC |	0
               Number of splices: Non-canonical |	0
                      Mismatch rate per base, % |	1.38%
                         Deletion rate per base |	0.00%
                        Deletion average length |	1.00
                        Insertion rate per base |	0.00%
                       Insertion average length |	0.00
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7808
             % of reads mapped to multiple loci |	0.68%
        Number of reads mapped to too many loci |	778
             % of reads mapped to too many loci |	0.07%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	438
       % of reads unmapped: too many mismatches |	0.04%
            Number of reads unmapped: too short |	110297
                 % of reads unmapped: too short |	9.61%
                Number of reads unmapped: other |	1022774
                     % of reads unmapped: other |	89.15%
                                  CHIMERIC READS:
                       Number of chimeric reads |	3957
                            % of chimeric reads |	0.34%