## htsjdk.samtools.metrics.StringHeader
# CollectInsertSizeMetrics --Histogram_FILE NTC_0001_0001_B23LG7FLT4_2_collectinsertsize.pdf --INPUT NTC_0001_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam --OUTPUT NTC_0001_0001_B23LG7FLT4_2_collectinsertsize.txt --DEVIATIONS 10.0 --MINIMUM_PCT 0.05 --METRIC_ACCUMULATION_LEVEL ALL_READS --INCLUDE_DUPLICATES false --ASSUME_SORTED true --STOP_AFTER 0 --VERBOSITY INFO --QUIET false --VALIDATION_STRINGENCY STRICT --COMPRESSION_LEVEL 5 --MAX_RECORDS_IN_RAM 500000 --CREATE_INDEX false --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
## htsjdk.samtools.metrics.StringHeader
# Started on: Tue Mar 03 22:03:56 GMT 2026
## METRICS CLASS picard.analysis.InsertSizeMetrics
MEDIAN_INSERT_SIZE MODE_INSERT_SIZE MEDIAN_ABSOLUTE_DEVIATION MIN_INSERT_SIZE MAX_INSERT_SIZE MEAN_INSERT_SIZE STANDARD_DEVIATION READ_PAIRS PAIR_ORIENTATION WIDTH_OF_10_PERCENT WIDTH_OF_20_PERCENT WIDTH_OF_30_PERCENT WIDTH_OF_40_PERCENT WIDTH_OF_50_PERCENT WIDTH_OF_60_PERCENT WIDTH_OF_70_PERCENT WIDTH_OF_80_PERCENT WIDTH_OF_90_PERCENT WIDTH_OF_95_PERCENT WIDTH_OF_99_PERCENT SAMPLE LIBRARY READ_GROUP
35 32 10 12 120837 44.087945 23.364438 14290 FR 5 7 9 15 21 35 51 91 241 13685 13701
## HISTOGRAM java.lang.Integer
insert_size All_Reads.fr_count
12 1
14 9
15 93
16 271
17 309
18 181
19 142
20 81
21 85
22 56
23 59
24 110
25 121
26 242
27 272
28 440
29 559
30 553
31 821
32 1140
33 876
34 715
35 411
36 171
37 104
38 64
39 52
40 59
41 52
42 129
43 81
44 75
45 220
46 91
47 135
48 94
49 102
50 58
51 132
52 106
53 43
54 79
55 89
56 104
57 67
58 124
59 125
60 136
61 42
62 73
63 49
64 64
65 66
66 100
67 54
68 95
69 97
70 104
71 52
72 104
73 53
74 158
75 46
76 59
77 47
78 66
79 45
80 47
81 47
82 72
83 48
84 55
85 57
86 42
87 27
88 39
89 39
90 40
91 48
92 49
93 41
94 39
95 28
96 35
97 43
98 36
99 51
100 28
101 59
102 18
103 31
104 16
105 22
106 18
107 29
108 12
109 21
110 8
111 13
112 43
113 25
114 6
115 31
116 3
117 4
118 10
119 9
120 6
121 12
122 2
123 2
124 3
125 3
126 3
127 3
128 7
129 2
130 4
131 1
132 1
133 4
134 2
135 1