FastQCFastQC Report
Tue 3 Mar 2026
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2_trimmed_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameBreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2_trimmed_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9022667
Total Bases788.4 Mbp
Sequences flagged as poor quality0
Sequence length15-151
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG774420.8583049778962251No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)