sample_id	category	signature	score_log2tpm1_mean	n_present	n_in_signature_targeted
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	Angiogenesis_VEGF	4.063	9	9
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	BMP_signaling	4.756	13	13
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	Cell_cycle	3.764	15	15
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	Hedgehog_signaling	4.208	10	10
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	Hippo_signaling	6.053	13	13
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	Homologous_recombination_repair	3.29	33	33
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	Hormone_receptor_signaling	3.625	8	8
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	JAK_STAT	5.994	11	11
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	MSI_MMR	4.017	23	23
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	MYC_signaling	5.433	5	5
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	Metastasis_EMT	5.63	39	39
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	NFkB_signaling	6.227	10	10
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	NOTCH_signaling	4.776	27	27
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	PI3K_AKT_mTOR	6.176	18	18
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	RTK_MAPK_signaling	5.249	32	32
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	TGFb_signaling	5.132	13	13
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	WNT_signaling	3.683	38	38
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	cancer	p53_pathway	6.144	7	7
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	housekeeping	Housekeeping_core_minimal	6.225	10	10
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	housekeeping	Housekeeping_normalization	6.224	20	20
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	sex_chromosome	chry_signature	0.0	5	5
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Bladder	1.919	12	12
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Brain_Glioma	3.13	9	9
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Breast	5.185	13	13
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Breast_Basal_like_TNBC	3.143	8	8
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Breast_HER2_enriched	7.514	9	9
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Breast_Luminal_A	6.266	10	10
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Breast_Luminal_B	4.832	11	11
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Colorectal	6.667	13	13
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Endometrial	4.277	9	9
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Kidney_ClearCell	2.738	8	8
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Liver	2.704	10	10
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Lung_Adenocarcinoma	2.219	9	9
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Lung_Squamous	1.459	7	7
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Melanoma	2.961	7	7
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Neuroendocrine	4.399	8	8
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Ovary	4.102	8	8
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Pancreas	5.06	10	10
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Prostate	3.261	7	7
BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2	tissue_origin	Upper_Urinary_Tract	2.688	11	11