#==================================================
#All numbers are READ count
#==================================================

Total records:                          219432980

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        30654560
Unmapped reads:                         4221524
mapq < mapq_cut (non-unique):           10961080

mapq >= mapq_cut (unique):              173595816
Read-1:                                 86873638
Read-2:                                 86722178
Reads map to '+':                       86809603
Reads map to '-':                       86786213
Non-splice reads:                       128739357
Splice reads:                           44856459
Reads mapped in proper pairs:           172924318
Proper-paired reads map to different chrom:0