File Info
- Filename
- ColoN_FFPE_L08_RNA_01_B23LG7FLT4_1.Log.progress.out
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion_100M__5f1fa793--20260303-130000/star_for_starfusion/ColoN_FFPE_L08_RNA_01_B23LG7FLT4_1.Log.progress.out
- Size
- 9.2 KB
- Workflow Run
- dev_rna_exp0011_5f1fa793
- Published
- Mar 03, 2026 4:56 PM
Content
View in new tab Time Speed Read Read Mapped Mapped Mapped Mapped Unmapped Unmapped Unmapped Unmapped
M/hr number length unique length MMrate multi multi+ MM short other
Mar 03 23:32:57 Started 1st pass mapping
Mar 03 23:33:09 17.4 58143 200 92.4% 199.9 0.9% 5.1% 0.4% 0.5% 1.4% 0.2%
Mar 03 23:34:15 193.3 4188337 202 92.6% 201.8 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:35:15 209.4 8026762 202 92.6% 201.8 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:36:19 210.3 11800345 202 92.6% 201.9 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:37:19 212.4 15458848 202 92.6% 201.8 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:38:22 214.3 19348114 202 92.6% 201.7 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:39:22 214.0 22890880 202 92.6% 201.6 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:40:22 214.8 26552236 201 92.6% 201.6 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:41:22 215.4 30211979 201 92.6% 201.6 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:42:24 216.1 34042383 201 92.6% 201.5 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:43:24 215.2 37475047 201 92.6% 201.5 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:44:29 216.1 41542462 201 92.6% 201.5 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:45:29 217.2 45380027 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:46:29 217.7 49094762 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:47:29 217.8 52754252 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:48:30 217.9 56470786 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:49:30 218.8 60360391 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:50:30 219.5 64197570 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:51:32 219.8 68091987 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:52:33 220.3 71979066 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:53:33 220.6 75749853 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:54:33 221.1 79580977 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:55:33 221.5 83413338 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:56:33 221.2 87017786 201 92.6% 201.4 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:57:33 221.5 90797404 201 92.6% 201.3 0.9% 4.9% 0.4% 0.5% 1.3% 0.2%
Mar 03 23:58:11 Finished 1st pass mapping
Mar 04 00:00:30 83.5 1438681 201 91.7% 201.6 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:01:32 101.6 3500159 202 91.7% 201.9 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:02:32 108.8 5562861 202 91.8% 201.9 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:03:32 111.7 7569029 202 91.7% 201.9 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:04:32 113.4 9572880 202 91.7% 201.9 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:05:33 114.1 11570681 202 91.7% 202.0 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:06:33 113.0 13345093 202 91.7% 201.9 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:07:34 114.1 15401542 202 91.8% 201.9 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:08:35 114.5 17402834 202 91.7% 201.8 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:09:35 114.1 19233696 202 91.7% 201.8 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:10:38 113.8 21177349 202 91.7% 201.7 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:11:38 114.3 23175759 202 91.7% 201.8 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:12:38 113.4 24895894 201 91.7% 201.7 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:13:38 113.4 26781318 201 91.7% 201.7 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:14:39 113.3 28666694 201 91.7% 201.7 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:15:39 113.3 30555085 201 91.7% 201.7 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:16:41 112.3 32211854 201 91.7% 201.7 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:17:41 112.1 34042383 201 91.7% 201.6 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:18:41 110.9 35530389 201 91.7% 201.6 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:19:41 111.1 37417978 201 91.7% 201.6 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:20:42 109.9 38908954 201 91.7% 201.6 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:21:42 109.8 40680745 201 91.7% 201.6 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:22:43 109.1 42287195 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:23:43 108.6 43889206 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:24:43 108.0 45437003 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:25:43 107.8 47153546 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:26:43 107.2 48696177 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:27:44 106.8 50297291 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:28:46 106.2 51839531 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:29:47 105.8 53441107 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:30:49 105.3 55038477 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:31:51 104.9 56642313 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:32:53 104.7 58297262 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:33:56 104.6 60074723 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:34:58 104.9 62079609 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:36:03 104.9 63967007 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:37:03 105.0 65744316 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:38:07 104.8 67518775 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:39:10 104.8 69348952 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:40:10 104.7 71008377 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:41:10 104.7 72777598 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:42:10 104.9 74665907 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:43:10 105.0 76494694 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:44:11 104.9 78206038 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:45:12 105.3 80266038 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:46:13 105.7 82326295 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:47:13 105.9 84269982 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:48:13 106.0 86104842 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:49:15 106.2 88107660 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:50:16 106.3 89993194 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:51:16 106.5 91941562 201 91.7% 201.4 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
Mar 04 00:53:06 104.1 93024087 201 91.7% 201.5 0.9% 4.4% 0.2% 0.5% 1.8% 0.5%
ALL DONE!