#==================================================
#All numbers are READ count
#==================================================

Total records:                          225044048

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        31690935
Unmapped reads:                         3063012
mapq < mapq_cut (non-unique):           9886592

mapq >= mapq_cut (unique):              180403509
Read-1:                                 90308933
Read-2:                                 90094576
Reads map to '+':                       90216090
Reads map to '-':                       90187419
Non-splice reads:                       127319863
Splice reads:                           53083646
Reads mapped in proper pairs:           179775302
Proper-paired reads map to different chrom:0