Prefix: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion_100M__5f1fa793--20260303-130000
| Path | ||
|---|---|---|
| /fastp/BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2.fastp.json | Mar 03, 2026 2:07 PM | |
| /QC/seqtool/NTC_0001_0001_B23LG7FLT4_2 | Mar 03, 2026 2:07 PM | |
| /QC/seqtool/NTC_0001_0001_B23LG7FLT4_2.md.mpileup | Mar 03, 2026 2:07 PM | |
| /seqtk_downsample/BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2_BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2_S57_R1_001.fastq.gz | Mar 03, 2026 2:06 PM | |
| /seqtk_downsample/BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2_BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2_S57_R2_001.fastq.gz | Mar 03, 2026 2:06 PM | |
| /ctat_splicing/NTC_0001_0001_B23LG7FLT4_2.exon_skipping.vcf | Mar 03, 2026 2:06 PM | |
| /ctat_splicing/NTC_0001_0001_B23LG7FLT4_2.chckpts | Mar 03, 2026 2:06 PM | |
| /ctat_splicing/NTC_0001_0001_B23LG7FLT4_2.cancer.introns.prelim | Mar 03, 2026 2:06 PM | |
| /ctat_splicing/NTC_0001_0001_B23LG7FLT4_2.introns | Mar 03, 2026 2:06 PM | |
| /ctat_splicing/NTC_0001_0001_B23LG7FLT4_2.cancer.introns | Mar 03, 2026 2:06 PM | |
| /contamination/NTC_0001_0001_B23LG7FLT4_2_contamination_mqc.tsv | Mar 03, 2026 2:05 PM | |
| /QC/rseqc/NTC_0001_0001_B23LG7FLT4_2.read_distribution.txt | Mar 03, 2026 2:05 PM | |
| /rna_contamination/predictions/NTC_0001_0001_B23LG7FLT4_2/NTC_0001_0001_B23LG7FLT4_2.predictions.csv | Mar 03, 2026 2:05 PM | |
| /QC/seqtool/NTC_0001_0001_B23LG7FLT4_2_full_bam_saturation_values.txt | Mar 03, 2026 2:05 PM | |
| /starfusion/NTC_0001_0001_B23LG7FLT4_2.starfusion.starfusion.abridged.tsv | Mar 03, 2026 2:05 PM | |
| /starfusion/NTC_0001_0001_B23LG7FLT4_2.starfusion.starfusion.abridged.coding_effect.tsv | Mar 03, 2026 2:05 PM | |
| /starfusion/NTC_0001_0001_B23LG7FLT4_2.starfusion.starfusion.fusion_predictions.tsv | Mar 03, 2026 2:05 PM | |
| /rna_contamination/vaf_features/NTC_0001_0001_B23LG7FLT4_2/NTC_0001_0001_B23LG7FLT4_2.features.csv | Mar 03, 2026 2:05 PM | |
| /rna_contamination/ngscheckmate/NTC_0001_0001_B23LG7FLT4_2/NTC_0001_0001_B23LG7FLT4_2.vcf | Mar 03, 2026 2:05 PM | |
| /cram_starfusion/NTC_0001_0001_B23LG7FLT4_2.star_for_starfusion.Aligned.sortedByCoord.out.cram.crai | Mar 03, 2026 2:05 PM |