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Filename
Demultiplex_Stats_aggregate.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0012_exp0013/A23WKFTLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/reports/Demultiplex_Stats_aggregate.csv
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Workflow Run
dev_rna_exp0012_exp0013-73d51683
Published
Jun 08, 2026 12:03 AM

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SampleID Lanes Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
BVT_FFPE_TRNA_bld_01_A23WKFTLT4_1 1,2,3,4,5,6,7,8 ATAAGCGG-CTGTTCTA 162390359 157695033 4695326 0 0.0054 0.9711 0.0289 0.0
BVT_FFPE_TRNA_bld_01_A23WKFTLT4_2 1,2,3,4,5,6,7,8 TCAGTTCG-CTGAGTCC 86018865 84524578 1494287 0 0.0028 0.9826 0.0174 0.0
BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3 1,2,3,4,5,6,7,8 GCAATCTG-ACGAACCA 38711960 37999101 712859 0 0.0013 0.9816 0.0184 0.0
BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1 1,2,3,4,5,6,7,8 GAACCGCA-CATTATGC 329944770 324970087 4974683 0 0.0109 0.9849 0.0151 0.0
BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2 1,2,3,4,5,6,7,8 ATATTCTC-AGATGCTC 295577768 290735658 4842110 0 0.0097 0.9836 0.0164 0.0
BVT_FFPE_TRNA_bld_02_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CCGAACAG-TGATACTC 262479341 256889682 5589659 0 0.0087 0.9787 0.0213 0.0
BVT_FFPE_TRNA_brn_01_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TTACGCGC-CTTAACGA 294075119 289691007 4384112 0 0.0097 0.9851 0.0149 0.0
BVT_FFPE_TRNA_brn_01_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CATAAGCG-CCTCTTCA 228825691 224634320 4191371 0 0.0075 0.9817 0.0183 0.0
BVT_FFPE_TRNA_brn_01_A23WKFTLT4_3 1,2,3,4,5,6,7,8 GAGCAGCT-TGCCAGTA 166949143 163452089 3497054 0 0.0055 0.9791 0.0209 0.0
BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1 1,2,3,4,5,6,7,8 AGATTAGC-CGCCTTAT 273302613 266609273 6693340 0 0.009 0.9755 0.0245 0.0
BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2 1,2,3,4,5,6,7,8 ACTCCGAA-TCCGTGTT 205747513 202834254 2913259 0 0.0068 0.9858 0.0142 0.0
BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3 1,2,3,4,5,6,7,8 ATGACAGC-CGCTTGTT 278030765 272749412 5281353 0 0.0092 0.981 0.019 0.0
BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_1 1,2,3,4,5,6,7,8 AGGTAACA-GCACGATG 215764150 212546339 3217811 0 0.0071 0.9851 0.0149 0.0
BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2 1,2,3,4,5,6,7,8 AATCTGCA-TGCGAAGT 221944347 218841071 3103276 0 0.0073 0.986 0.014 0.0
BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_3 1,2,3,4,5,6,7,8 TAGCGACG-GTAACGTT 152929862 149987166 2942696 0 0.005 0.9808 0.0192 0.0
BVT_FFPE_TRNA_bst_01_03_A23WKFTLT4_1 1,2,3,4,5,6,7,8 CGCACTTC-AATATGCC 269851374 265501801 4349573 0 0.0089 0.9839 0.0161 0.0
BVT_FFPE_TRNA_bst_01_03_A23WKFTLT4_2 1,2,3,4,5,6,7,8 AGTTCAGG-CACAGCTA 260530068 256577720 3952348 0 0.0086 0.9848 0.0152 0.0
BVT_FFPE_TRNA_bst_01_03_A23WKFTLT4_3 1,2,3,4,5,6,7,8 GTATGCCA-CCGAGTCT 200433853 197400425 3033428 0 0.0066 0.9849 0.0151 0.0
BVT_FFPE_TRNA_bst_02_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TGGAGATC-CAGCGGTA 390875528 380824531 10050997 0 0.0129 0.9743 0.0257 0.0
BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2 1,2,3,4,5,6,7,8 GAGATGAG-GAATGGCG 299180868 291654315 7526553 0 0.0099 0.9748 0.0252 0.0
BVT_FFPE_TRNA_bst_02_A23WKFTLT4_3 1,2,3,4,5,6,7,8 GTACAGAC-GTTCTAAT 419789008 413145560 6643448 0 0.0138 0.9842 0.0158 0.0
BVT_FFPE_TRNA_bst_04_A23WKFTLT4_1 1,2,3,4,5,6,7,8 CCAGACCG-GCTACTTG 271536194 266471525 5064669 0 0.009 0.9813 0.0187 0.0
BVT_FFPE_TRNA_bst_04_A23WKFTLT4_2 1,2,3,4,5,6,7,8 TCACCATA-AAGTTCAG 270982691 266491149 4491542 0 0.0089 0.9834 0.0166 0.0
BVT_FFPE_TRNA_bst_04_A23WKFTLT4_3 1,2,3,4,5,6,7,8 GCCAACAG-CGTTCACG 192427214 189326568 3100646 0 0.0063 0.9839 0.0161 0.0
BVT_FFPE_TRNA_bst_05_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TCCAACTG-TGTCCGTA 276156756 270999131 5157625 0 0.0091 0.9813 0.0187 0.0
BVT_FFPE_TRNA_bst_05_A23WKFTLT4_2 1,2,3,4,5,6,7,8 AGCAATTC-TCATCGTC 336131499 331082186 5049313 0 0.0111 0.985 0.015 0.0
BVT_FFPE_TRNA_bst_05_A23WKFTLT4_3 1,2,3,4,5,6,7,8 AGTAAGGA-ATGCTTGG 235808331 232012086 3796245 0 0.0078 0.9839 0.0161 0.0
BVT_FFPE_TRNA_bst_06_A23WKFTLT4_1 1,2,3,4,5,6,7,8 AGGATGTC-ACTGGACG 500951004 492150197 8800807 0 0.0165 0.9824 0.0176 0.0
BVT_FFPE_TRNA_bst_06_A23WKFTLT4_2 1,2,3,4,5,6,7,8 AACTCTCT-ACGGCTTC 452155926 443591257 8564669 0 0.0149 0.9811 0.0189 0.0
BVT_FFPE_TRNA_bst_06_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CGGAACAC-AACTCTAC 495123599 486236694 8886905 0 0.0163 0.9821 0.0179 0.0
BVT_FFPE_TRNA_crv_01_A23WKFTLT4_1 1,2,3,4,5,6,7,8 ACCGAATA-TCAGCATC 84541845 83105974 1435871 0 0.0028 0.983 0.017 0.0
BVT_FFPE_TRNA_crv_01_A23WKFTLT4_2 1,2,3,4,5,6,7,8 AAGCGCTT-TGTCTGTG 542131082 532192737 9938345 0 0.0179 0.9817 0.0183 0.0
BVT_FFPE_TRNA_crv_01_A23WKFTLT4_3 1,2,3,4,5,6,7,8 AATAGGTA-TGGCTTAT 396789756 391203089 5586667 0 0.0131 0.9859 0.0141 0.0
BVT_FFPE_TRNA_crv_02_A23WKFTLT4_1 1,2,3,4,5,6,7,8 CGGACGAT-TAGGTGGT 29081498 28667100 414398 0 0.001 0.9858 0.0142 0.0
BVT_FFPE_TRNA_crv_02_A23WKFTLT4_2 1,2,3,4,5,6,7,8 AACAACAC-GAACATTG 62417134 61257519 1159615 0 0.0021 0.9814 0.0186 0.0
BVT_FFPE_TRNA_crv_02_A23WKFTLT4_3 1,2,3,4,5,6,7,8 TATGCGTA-TCAGAGGC 43893420 43216037 677383 0 0.0014 0.9846 0.0154 0.0
BVT_FFPE_TRNA_crv_04_A23WKFTLT4_1 1,2,3,4,5,6,7,8 CTTACGAA-ACGGACTG 367069713 360871192 6198521 0 0.0121 0.9831 0.0169 0.0
BVT_FFPE_TRNA_crv_04_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CTCCGCCA-GCGTTCAG 363143876 357253218 5890658 0 0.012 0.9838 0.0162 0.0
BVT_FFPE_TRNA_crv_04_A23WKFTLT4_3 1,2,3,4,5,6,7,8 AGATGTAA-CTGTACCA 213820210 210401492 3418718 0 0.007 0.984 0.016 0.0
BVT_FFPE_TRNA_kid_01_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TAACTTGG-GTCGTGAA 293841333 288680422 5160911 0 0.0097 0.9824 0.0176 0.0
BVT_FFPE_TRNA_kid_01_A23WKFTLT4_2 1,2,3,4,5,6,7,8 TCGACGGC-GTAGTTGT 237411712 233711538 3700174 0 0.0078 0.9844 0.0156 0.0
BVT_FFPE_TRNA_kid_01_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CAACTGCG-AGTGTATC 166285304 163002279 3283025 0 0.0055 0.9803 0.0197 0.0
BVT_FFPE_TRNA_liv_03_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TTCCTCAC-ACATGAGC 416030844 409127272 6903572 0 0.0137 0.9834 0.0166 0.0
BVT_FFPE_TRNA_liv_03_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CGAGCGTA-TGCTCACG 288213007 283871198 4341809 0 0.0095 0.9849 0.0151 0.0
BVT_FFPE_TRNA_liv_03_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CCTCCTGT-CACGTCTA 174124256 170741849 3382407 0 0.0057 0.9806 0.0194 0.0
BVT_FFPE_TRNA_skn_01_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TCGCGACA-CGAGTAAT 202643465 199516376 3127089 0 0.0067 0.9846 0.0154 0.0
BVT_FFPE_TRNA_skn_01_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CGATGTCT-CCGAACGT 274104646 269791523 4313123 0 0.009 0.9843 0.0157 0.0
BVT_FFPE_TRNA_skn_01_A23WKFTLT4_3 1,2,3,4,5,6,7,8 GTGTCTAC-ACACTAGC 214374945 211048130 3326815 0 0.0071 0.9845 0.0155 0.0
BVT_FFPE_TRNA_stm_04_A23WKFTLT4_1 1,2,3,4,5,6,7,8 ATGTTGCC-TAGAAGCC 394829237 388925717 5903520 0 0.013 0.985 0.015 0.0
BVT_FFPE_TRNA_stm_04_A23WKFTLT4_2 1,2,3,4,5,6,7,8 GACCTACT-ATTGTAAG 342645139 337109886 5535253 0 0.0113 0.9838 0.0162 0.0
BVT_FFPE_TRNA_stm_04_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CACTTACG-GCTGGAGA 183773116 180839399 2933717 0 0.0061 0.984 0.016 0.0
BVT_FFPE_TRNA_stm_05_A23WKFTLT4_1 1,2,3,4,5,6,7,8 CAGCAGGT-CACTTAGG 515967323 508897502 7069821 0 0.017 0.9863 0.0137 0.0
BVT_FFPE_TRNA_stm_05_A23WKFTLT4_2 1,2,3,4,5,6,7,8 ACGAGACG-CGGTCTCT 402948082 396021979 6926103 0 0.0133 0.9828 0.0172 0.0
BVT_FFPE_TRNA_stm_05_A23WKFTLT4_3 1,2,3,4,5,6,7,8 TCAGCATC-CCAGTGTA 491935362 483617645 8317717 0 0.0162 0.9831 0.0169 0.0
BVT_FFPE_TRNA_stm_06_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TCTAGCTG-ATAGGTAA 344575265 338759310 5815955 0 0.0114 0.9831 0.0169 0.0
BVT_FFPE_TRNA_stm_06_A23WKFTLT4_2 1,2,3,4,5,6,7,8 TATGGCAA-AACAGCAA 252020266 247860662 4159604 0 0.0083 0.9835 0.0165 0.0
BVT_FFPE_TRNA_stm_06_A23WKFTLT4_3 1,2,3,4,5,6,7,8 GTTGCATC-GTTGATGC 177367858 174693969 2673889 0 0.0058 0.9849 0.0151 0.0
BVT_FFPE_TRNA_stm_07_A23WKFTLT4_1 1,2,3,4,5,6,7,8 CTTGCTAT-TAGAGTCA 576275282 568109199 8166083 0 0.019 0.9858 0.0142 0.0
BVT_FFPE_TRNA_stm_07_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CGCCAAGG-GATAGTGT 427998887 420257678 7741209 0 0.0141 0.9819 0.0181 0.0
BVT_FFPE_TRNA_stm_07_A23WKFTLT4_3 1,2,3,4,5,6,7,8 AGTATCCG-TATTGCGC 458107104 447329494 10777610 0 0.0151 0.9765 0.0235 0.0
BVT_FFPE_TRNA_stm_08_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TCTCACCA-TTAACAGG 363376056 356408412 6967644 0 0.012 0.9808 0.0192 0.0
BVT_FFPE_TRNA_stm_08_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CCTGACAT-TAGCTACC 313287743 305857379 7430364 0 0.0103 0.9763 0.0237 0.0
BVT_FFPE_TRNA_stm_08_A23WKFTLT4_3 1,2,3,4,5,6,7,8 AACGAAGA-TGTGGTCT 176183534 173345788 2837746 0 0.0058 0.9839 0.0161 0.0
BVT_FFPE_TRNA_stm_09_A23WKFTLT4_1 1,2,3,4,5,6,7,8 ACAACAGG-TCCACTGT 487056710 479688323 7368387 0 0.0161 0.9849 0.0151 0.0
BVT_FFPE_TRNA_stm_09_A23WKFTLT4_2 1,2,3,4,5,6,7,8 GACTCATC-GAACCAAG 412801697 406705250 6096447 0 0.0136 0.9852 0.0148 0.0
BVT_FFPE_TRNA_stm_09_A23WKFTLT4_3 1,2,3,4,5,6,7,8 AGAACTAA-TTATCGAG 400624919 394821422 5803497 0 0.0132 0.9855 0.0145 0.0
BVT_FFPE_TRNA_thy_01_A23WKFTLT4_1 1,2,3,4,5,6,7,8 AGTAGTGT-AACACCTC 334179650 328901192 5278458 0 0.011 0.9842 0.0158 0.0
BVT_FFPE_TRNA_thy_01_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CTAACCTC-TCACAGTT 74760281 73279678 1480603 0 0.0025 0.9802 0.0198 0.0
BVT_FFPE_TRNA_thy_01_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CTCTATTG-CACGCAAG 277208974 270019467 7189507 0 0.0091 0.9741 0.0259 0.0
BVT_FFPE_TRNA_thy_02_A23WKFTLT4_1 1,2,3,4,5,6,7,8 GCCAGCTA-TTGTTCGT 372034027 366429596 5604431 0 0.0123 0.9849 0.0151 0.0
BVT_FFPE_TRNA_thy_02_A23WKFTLT4_2 1,2,3,4,5,6,7,8 GCCACCTA-TGCGATGT 434527581 425458376 9069205 0 0.0143 0.9791 0.0209 0.0
BVT_FFPE_TRNA_thy_02_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CTATAACG-CGTGACAT 253515609 249437284 4078325 0 0.0084 0.9839 0.0161 0.0
BVT_FFPE_TRNA_utn_01_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TTCTCTTA-TCCTCGAG 14720558 14510161 210397 0 0.0005 0.9857 0.0143 0.0
BVT_FFPE_TRNA_utn_01_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CCTAAGCT-CGTCGCAT 19814184 19445503 368681 0 0.0007 0.9814 0.0186 0.0
BVT_FFPE_TRNA_utn_01_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CCGATAGT-GAGTTGCA 14751257 14331796 419461 0 0.0005 0.9716 0.0284 0.0
BVT_FFPE_TRNA_utn_02_A23WKFTLT4_1 1,2,3,4,5,6,7,8 CCACAGCC-GCTATTGA 482095922 473861093 8234829 0 0.0159 0.9829 0.0171 0.0
BVT_FFPE_TRNA_utn_02_A23WKFTLT4_2 1,2,3,4,5,6,7,8 ACTTCCGG-GACCAATT 467609052 460376135 7232917 0 0.0154 0.9845 0.0155 0.0
BVT_FFPE_TRNA_utn_02_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CCTCGTTG-GACTGCGT 372218755 365301375 6917380 0 0.0123 0.9814 0.0186 0.0
BVT_FFPE_TRNA_utn_04_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TCGAACAC-GCGAGGTT 223650469 220084322 3566147 0 0.0074 0.9841 0.0159 0.0
BVT_FFPE_TRNA_utn_04_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CTGGATTA-AAGTGTGC 264642940 261247155 3395785 0 0.0087 0.9872 0.0128 0.0
BVT_FFPE_TRNA_utn_04_A23WKFTLT4_3 1,2,3,4,5,6,7,8 TAGGCGAA-AGTCCAGT 322235160 317460985 4774175 0 0.0106 0.9852 0.0148 0.0
BVT_FFPE_TRNA_utn_05_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TTACTTCG-AAGATCGG 277880753 273399581 4481172 0 0.0092 0.9839 0.0161 0.0
BVT_FFPE_TRNA_utn_05_A23WKFTLT4_2 1,2,3,4,5,6,7,8 AGACTAGA-CGTAACAC 300263895 294608705 5655190 0 0.0099 0.9812 0.0188 0.0
BVT_FFPE_TRNA_utn_05_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CCAGTCGT-CGCTAGGC 215511018 211833016 3678002 0 0.0071 0.9829 0.0171 0.0
BVT_FFPE_TRNA_utn_07_A23WKFTLT4_1 1,2,3,4,5,6,7,8 ATTCGGCT-TTAACGTC 316151042 311824566 4326476 0 0.0104 0.9863 0.0137 0.0
BVT_FFPE_TRNA_utn_07_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CCTCTATA-GTACTTCC 208686512 204576075 4110437 0 0.0069 0.9803 0.0197 0.0
BVT_FFPE_TRNA_utn_07_A23WKFTLT4_3 1,2,3,4,5,6,7,8 AGAAGACC-AACCGTAA 212363772 207592631 4771141 0 0.007 0.9775 0.0225 0.0
BVT_FFPE_TRNA_utn_08_A23WKFTLT4_1 1,2,3,4,5,6,7,8 CGCGGTAT-ATTACCGA 417531106 411463720 6067386 0 0.0138 0.9855 0.0145 0.0
BVT_FFPE_TRNA_utn_08_A23WKFTLT4_2 1,2,3,4,5,6,7,8 TACGCTAC-TTAGCGTC 458173105 451263764 6909341 0 0.0151 0.9849 0.0151 0.0
BVT_FFPE_TRNA_utn_08_A23WKFTLT4_3 1,2,3,4,5,6,7,8 CCGTGAGT-CTTGGTAT 419513249 412764559 6748690 0 0.0138 0.9839 0.0161 0.0
BVT_FFPE_TRNA_utn_09_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TATCCGCG-GTTGCATC 397839110 390598437 7240673 0 0.0131 0.9818 0.0182 0.0
BVT_FFPE_TRNA_utn_09_A23WKFTLT4_2 1,2,3,4,5,6,7,8 CGCACTGG-TTGACCGT 498061611 489715005 8346606 0 0.0164 0.9832 0.0168 0.0
BVT_FFPE_TRNA_utn_09_A23WKFTLT4_3 1,2,3,4,5,6,7,8 TCAATTCC-TGTAGATC 391515056 385664786 5850270 0 0.0129 0.9851 0.0149 0.0
FFPE_HD789_01_RNA_13_A23WKFTLT4_1 1,2,3,4,5,6,7,8 CAAGACTC-CACCGTCA 770134999 757471354 12663645 0 0.0254 0.9836 0.0164 0.0
FFPE_V4_0002_RNA_0001_A23WKFTLT4_1 1,2,3,4,5,6,7,8 TGACACGA-GCCTAGGA 489446022 481713179 7732843 0 0.0161 0.9842 0.0158 0.0
NTC_0001_0001_A23WKFTLT4_1 1,2,3,4,5,6,7,8 ATGCTTAC-ACTGGTTC 42654 41905 749 0 0.0 0.9824 0.0176 0.0
Undetermined 1,2,3,4,5,6,7,8 1854749553 1854749553 0 0 0.0611 1.0 0.0 0.0
98 rows