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BCL CONVERT QC REPORT - DETAILED
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1. % UNDETERMINED PER LANE
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%_Undetermined Undetermined_Reads Total_Reads
Lane
1 6.09 229378957 3765836573
2 6.16 234482693 3808656728
3 6.11 231046869 3782891482
4 6.29 238336927 3786544169
5 6.05 227722125 3766547590
6 6.05 229280588 3789947275
7 6.01 227683499 3790347255
8 6.16 236817895 3841374609
2. SAMPLES WITH LOW READS (NON-NTC)
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No samples found with low reads
3. NTC SAMPLES WITH HIGH READS
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No NTC samples found with high reads
4. TOP UNKNOWN BARCODES
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Found 98 significant unknown barcodes:
Lane index index2 # Reads % of Unknown Barcodes % of All Reads Percentage_of_Lane Percentage_of_Total
0 1 TATCCGCG GGGGGGGG 5561254 0.024245 0.001477 0.147676 0.018335
1 1 GCAATCTG TATTGCGC 5292736 0.023074 0.001405 0.140546 0.017449
2 1 AGTATCCG ACGAACCA 4945101 0.021559 0.001313 0.131315 0.016303
3 1 ATGACAGC GGGGGGGG 4653990 0.020290 0.001236 0.123584 0.015343
4 1 AGATTAGC GGGGGGGG 4532210 0.019759 0.001204 0.120351 0.014942
5 1 TGGAGATC GGGGGGGG 3513216 0.015316 0.000933 0.093292 0.011582
6 1 CCAGTCGT GGGGGGGG 3258177 0.014204 0.000865 0.086519 0.010742
7 1 ACGAGACG GGGGGGGG 3065774 0.013366 0.000814 0.081410 0.010107
8 1 TAACTTGG GGGGGGGG 2879256 0.012552 0.000765 0.076457 0.009492
9 1 TCCAACTG GGGGGGGG 2782967 0.012133 0.000739 0.073900 0.009175
10 1 GCCACCTA GGGGGGGG 2695121 0.011750 0.000716 0.071568 0.008885
11 1 CAAGACTC GGGGGGGG 2561364 0.011167 0.000680 0.068016 0.008444
12 2 TATCCGCG GGGGGGGG 5587499 0.023829 0.001467 0.146705 0.018421
13 2 GCAATCTG TATTGCGC 5350959 0.022820 0.001405 0.140495 0.017641
14 2 AGTATCCG ACGAACCA 4999677 0.021322 0.001313 0.131271 0.016483
15 2 ATGACAGC GGGGGGGG 4683262 0.019973 0.001230 0.122964 0.015440
16 2 AGATTAGC GGGGGGGG 4524904 0.019297 0.001188 0.118806 0.014918
17 2 TGGAGATC GGGGGGGG 3500694 0.014929 0.000919 0.091914 0.011541
18 2 CCAGTCGT GGGGGGGG 3273832 0.013962 0.000860 0.085958 0.010793
19 2 ACGAGACG GGGGGGGG 3162363 0.013487 0.000830 0.083031 0.010426
20 2 TAACTTGG GGGGGGGG 2878967 0.012278 0.000756 0.075590 0.009491
21 2 TCCAACTG GGGGGGGG 2784587 0.011875 0.000731 0.073112 0.009180
22 2 GCCACCTA GGGGGGGG 2783969 0.011873 0.000731 0.073096 0.009178
23 2 CAAGACTC GGGGGGGG 2501632 0.010669 0.000657 0.065683 0.008247
24 3 TATCCGCG GGGGGGGG 5428364 0.023495 0.001435 0.143498 0.017896
25 3 GCAATCTG TATTGCGC 5306076 0.022965 0.001403 0.140265 0.017493
26 3 AGTATCCG ACGAACCA 4978278 0.021547 0.001316 0.131600 0.016413
27 3 ATGACAGC GGGGGGGG 4552737 0.019705 0.001204 0.120351 0.015010
28 3 AGATTAGC GGGGGGGG 4415999 0.019113 0.001167 0.116736 0.014559
29 3 TGGAGATC GGGGGGGG 3405893 0.014741 0.000900 0.090034 0.011229
30 3 CCAGTCGT GGGGGGGG 3187570 0.013796 0.000843 0.084263 0.010509
31 3 ACGAGACG GGGGGGGG 3047759 0.013191 0.000806 0.080567 0.010048
32 3 TAACTTGG GGGGGGGG 2771254 0.011994 0.000733 0.073258 0.009136
33 3 GCCACCTA GGGGGGGG 2729222 0.011812 0.000721 0.072146 0.008998
34 3 TCCAACTG GGGGGGGG 2722020 0.011781 0.000720 0.071956 0.008974
35 3 CAAGACTC GGGGGGGG 2487044 0.010764 0.000657 0.065745 0.008199
36 4 TATCCGCG GGGGGGGG 5461232 0.022914 0.001442 0.144227 0.018005
37 4 GCAATCTG TATTGCGC 5263065 0.022082 0.001390 0.138994 0.017351
38 4 AGTATCCG ACGAACCA 4990777 0.020940 0.001318 0.131803 0.016454
39 4 ATGACAGC GGGGGGGG 4519777 0.018964 0.001194 0.119364 0.014901
40 4 AGATTAGC GGGGGGGG 4360403 0.018295 0.001152 0.115155 0.014376
41 4 TGGAGATC GGGGGGGG 3454239 0.014493 0.000912 0.091224 0.011388
42 4 CCAGTCGT GGGGGGGG 3161379 0.013264 0.000835 0.083490 0.010423
43 4 ACGAGACG GGGGGGGG 3053585 0.012812 0.000806 0.080643 0.010067
44 4 GCCACCTA GGGGGGGG 2990106 0.012546 0.000790 0.078967 0.009858
45 4 TCCAACTG GGGGGGGG 2754590 0.011558 0.000727 0.072747 0.009081
46 4 TAACTTGG GGGGGGGG 2665030 0.011182 0.000704 0.070382 0.008786
47 4 CAAGACTC GGGGGGGG 2595123 0.010888 0.000685 0.068535 0.008556
48 4 ATGTTGCC GGGGGGGG 1920056 0.008056 0.000507 0.050707 0.006330
49 5 TATCCGCG GGGGGGGG 5288258 0.023222 0.001404 0.140401 0.017435
50 5 GCAATCTG TATTGCGC 5256636 0.023084 0.001396 0.139561 0.017330
51 5 AGTATCCG ACGAACCA 4969771 0.021824 0.001319 0.131945 0.016385
52 5 ATGACAGC GGGGGGGG 4438070 0.019489 0.001178 0.117829 0.014632
53 5 AGATTAGC GGGGGGGG 4317353 0.018959 0.001146 0.114624 0.014234
54 5 TGGAGATC GGGGGGGG 3291686 0.014455 0.000874 0.087393 0.010852
55 5 CCAGTCGT GGGGGGGG 3086601 0.013554 0.000819 0.081948 0.010176
56 5 ACGAGACG GGGGGGGG 2909696 0.012777 0.000773 0.077251 0.009593
57 5 GCCACCTA GGGGGGGG 2759021 0.012116 0.000733 0.073251 0.009096
58 5 TAACTTGG GGGGGGGG 2663057 0.011694 0.000707 0.070703 0.008780
59 5 TCCAACTG GGGGGGGG 2630202 0.011550 0.000698 0.069831 0.008671
60 5 CAAGACTC GGGGGGGG 2406913 0.010570 0.000639 0.063902 0.007935
61 6 TATCCGCG GGGGGGGG 5430877 0.023687 0.001433 0.143297 0.017905
62 6 GCAATCTG TATTGCGC 5325134 0.023225 0.001405 0.140507 0.017556
63 6 AGTATCCG ACGAACCA 4975226 0.021699 0.001313 0.131274 0.016402
64 6 ATGACAGC GGGGGGGG 4576531 0.019960 0.001208 0.120754 0.015088
65 6 AGATTAGC GGGGGGGG 4420083 0.019278 0.001166 0.116627 0.014572
66 6 TGGAGATC GGGGGGGG 3383177 0.014756 0.000893 0.089267 0.011154
67 6 CCAGTCGT GGGGGGGG 3175152 0.013848 0.000838 0.083778 0.010468
68 6 ACGAGACG GGGGGGGG 3050980 0.013307 0.000805 0.080502 0.010059
69 6 TAACTTGG GGGGGGGG 2828666 0.012337 0.000746 0.074636 0.009326
70 6 GCCACCTA GGGGGGGG 2736101 0.011933 0.000722 0.072194 0.009020
71 6 TCCAACTG GGGGGGGG 2702717 0.011788 0.000713 0.071313 0.008910
72 6 CAAGACTC GGGGGGGG 2435310 0.010622 0.000643 0.064257 0.008029
73 7 TATCCGCG GGGGGGGG 5546683 0.024361 0.001463 0.146337 0.018286
74 7 GCAATCTG TATTGCGC 5333431 0.023425 0.001407 0.140711 0.017583
75 7 AGTATCCG ACGAACCA 4989930 0.021916 0.001316 0.131648 0.016451
76 7 ATGACAGC GGGGGGGG 4646297 0.020407 0.001226 0.122582 0.015318
77 7 AGATTAGC GGGGGGGG 4517094 0.019839 0.001192 0.119174 0.014892
78 7 TGGAGATC GGGGGGGG 3469002 0.015236 0.000915 0.091522 0.011437
79 7 CCAGTCGT GGGGGGGG 3257645 0.014308 0.000859 0.085946 0.010740
80 7 ACGAGACG GGGGGGGG 3135329 0.013771 0.000827 0.082719 0.010337
81 7 TAACTTGG GGGGGGGG 2885615 0.012674 0.000761 0.076131 0.009513
82 7 TCCAACTG GGGGGGGG 2769600 0.012164 0.000731 0.073070 0.009131
83 7 GCCACCTA GGGGGGGG 2715598 0.011927 0.000716 0.071645 0.008953
84 7 CAAGACTC GGGGGGGG 2517120 0.011055 0.000664 0.066409 0.008299
85 8 TATCCGCG GGGGGGGG 5743487 0.024253 0.001495 0.149516 0.018935
86 8 GCAATCTG TATTGCGC 5403438 0.022817 0.001407 0.140664 0.017814
87 8 AGTATCCG ACGAACCA 5064162 0.021384 0.001318 0.131832 0.016696
88 8 ATGACAGC GGGGGGGG 4789573 0.020225 0.001247 0.124684 0.015790
89 8 AGATTAGC GGGGGGGG 4650150 0.019636 0.001211 0.121054 0.015331
90 8 TGGAGATC GGGGGGGG 3573956 0.015092 0.000930 0.093038 0.011783
91 8 CCAGTCGT GGGGGGGG 3350422 0.014148 0.000872 0.087219 0.011046
92 8 ACGAGACG GGGGGGGG 3179970 0.013428 0.000828 0.082782 0.010484
93 8 TAACTTGG GGGGGGGG 2950400 0.012459 0.000768 0.076806 0.009727
94 8 TCCAACTG GGGGGGGG 2840507 0.011994 0.000739 0.073945 0.009365
95 8 GCCACCTA GGGGGGGG 2792923 0.011794 0.000727 0.072706 0.009208
96 8 CAAGACTC GGGGGGGG 2612977 0.011034 0.000680 0.068022 0.008615
97 8 GAGCAGCT GGGGGGGG 1961492 0.008283 0.000511 0.051062 0.006467
5. BARCODES WITH HIGH MISMATCH RATES
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No barcodes found with high mismatch rates
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FINAL STATUS CHECK
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Overall % Undetermined: 6.11%
Status: WARNING
Reason(s):
Overall undetermined 6.11% >= 5.0%