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Filename
BVT_FFPE_TRNA_stm_07_A23WKFTLT4_2.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0012_exp0013/A23WKFTLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/BVT_FFPE_TRNA_stm_07_A23WKFTLT4_2.FusionInspector.fusions.abridged.tsv
Size
9.9 KB
Workflow Run
dev_rna_exp0012_exp0013-73d51683
Published
Jun 08, 2026 5:19 AM

Content

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PCDHGB2--PCDHGA10 642 0 80.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 26 643.00 23.81 GT 1.7819 AG 1.3383 0.2717 1890 0
PCDHGB2--PCDHGA11 642 0 80.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 9 643.00 64.30 GT 1.7819 AG 1.3383 0.2717 1018 0
PCDHGB2--PCDHGA12 642 0 80.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 57 643.00 11.09 GT 1.7819 AG 1.3383 0.2717 1413 0
PCDHGB2--PCDHGA8 642 0 80.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 47 643.00 13.40 GT 1.7819 AG 1.3383 0.2717 1419 0
PCDHGB2--PCDHGA9 642 0 80.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 20 643.00 30.62 GT 1.7819 AG 1.3383 0.2717 1493 0
PCDHGB2--PCDHGA9 4 0 4.00 0.00 PCDHGB2^ENSG00000253910.2 2852 chr5:141361893:+ PCDHGA9^ENSG00000261934.2 8368 chr5:141404711:+ INCL_NON_REF_SPLICE YES 0 363 5.00 0.01 CT 1.7819 AC 1.9219 0.0135 1 17
PCDHGB2--PCDHGC3 642 0 80.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 456 643.00 1.41 GT 1.7819 AG 1.3383 0.2717 1210 0
PCDHGB2--PCDHGC4 642 0 80.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 643.00 643.00 GT 1.7819 AG 1.3383 0.2717 1585 0
PCDHGB2--PCDHGC5 642 0 80.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 5 643.00 107.17 GT 1.7819 AG 1.3383 0.2717 1206 0
PTPRK--RSPO3 608 2 608.00 2.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 520 123 1.17 4.93 GT 1.8892 AG 1.9329 2.0652 1100 0
PTPRK--RSPO3 12 0 12.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 56583 chr6:127150426:+ ONLY_REF_SPLICE YES 520 326 0.02 0.04 GT 1.8892 AG 1.9219 0.0406 125 0
PTPRK--RSPO3 3 0 3.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 57730 chr6:127155241:+ ONLY_REF_SPLICE YES 520 435 0.01 0.01 GT 1.8892 AG 1.9656 0.0102 1143 0
MAP7--PTPRK 526 0 526.00 0.00 MAP7^ENSG00000135525.18 8724 chr6:136388393:- PTPRK^ENSG00000152894.15 30439 chr6:128397688:- ONLY_REF_SPLICE YES 942 449 0.56 1.17 GT 1.9329 AG 1.6895 1.7808 4519 0
MAP7--PTPRK 26 0 26.00 0.00 MAP7^ENSG00000135525.18 8724 chr6:136388393:- PTPRK^ENSG00000152894.15 29400 chr6:128409332:- ONLY_REF_SPLICE YES 942 435 0.03 0.06 GT 1.9329 AG 1.9656 0.088 3858 0
MAP7--PTPRK 5 0 5.00 0.00 MAP7^ENSG00000135525.18 8724 chr6:136388393:- PTPRK^ENSG00000152894.15 31562 chr6:128322310:- ONLY_REF_SPLICE YES 942 450 0.01 0.01 GT 1.9329 AG 1.8892 0.0169 4552 0
MAP7--PTPRK 4 0 4.00 0.00 MAP7^ENSG00000135525.18 6599 chr6:136411620:- PTPRK^ENSG00000152894.15 30439 chr6:128397688:- ONLY_REF_SPLICE YES 746 449 0.01 0.01 GT 1.7056 AG 1.6895 0.0135 3363 0
MAP7--PTPRK 3 0 3.00 0.00 MAP7^ENSG00000135525.18 8719 chr6:136388398:- PTPRK^ENSG00000152894.15 30436 chr6:128397691:- INCL_NON_REF_SPLICE YES 1063 440 0.00 0.01 TG 1.7968 CC 1.8323 0.0102 4514 0
PTBP3--SUSD1 111 0 111.00 0.00 PTBP3^ENSG00000119314.16 10846 chr9:112234820:- SUSD1^ENSG00000106868.17 42289 chr9:112063033:- ONLY_REF_SPLICE YES 1148 244 0.10 0.46 GT 1.9329 AG 1.5546 0.3758 4583 0
PTBP3--SUSD1 33 0 33.00 0.00 PTBP3^ENSG00000119314.16 9768 chr9:112250929:- SUSD1^ENSG00000106868.17 42289 chr9:112063033:- ONLY_REF_SPLICE YES 1086 244 0.03 0.14 GT 1.5058 AG 1.5546 0.1117 4285 0
PTBP3--SUSD1 7 0 7.00 0.00 PTBP3^ENSG00000119314.16 14767 chr9:112227411:- SUSD1^ENSG00000106868.17 26428 chr9:112157613:- ONLY_REF_SPLICE YES 1201 431 0.01 0.02 GT 1.5219 AG 1.8323 0.0237 2057 0
PTBP3--SUSD1 3 0 3.00 0.00 PTBP3^ENSG00000119314.16 10846 chr9:112234820:- SUSD1^ENSG00000106868.17 42291 chr9:112063031:- INCL_NON_REF_SPLICE YES 1148 249 0.00 0.02 GT 1.9329 AG 1.6049 0.0102 4581 0
PTBP3--SUSD1 2 0 2.00 0.00 PTBP3^ENSG00000119314.16 10846 chr9:112234820:- SUSD1^ENSG00000106868.17 44645 chr9:112052438:- ONLY_REF_SPLICE YES 1148 195 0.00 0.02 GT 1.9329 AG 1.9329 0.0068 2359 0
PTBP3--SUSD1 1 0 1.00 0.00 PTBP3^ENSG00000119314.16 7482 chr9:112262435:- SUSD1^ENSG00000106868.17 42289 chr9:112063033:- ONLY_REF_SPLICE YES 796 244 0.00 0.01 GT 1.9656 AG 1.5546 0.0034 2751 0
STX16--NPEPL1 106 1 106.00 1.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 488 36 0.22 2.92 GT 1.7968 AG 1.8256 0.3623 1940 0
STX16--NPEPL1 4 0 4.00 0.00 STX16^ENSG00000124222.22 1835 chr20:58652087:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 730 36 0.01 0.14 GT 1.9899 AG 1.8256 0.0135 1258 0
STX16--NPEPL1 4 0 4.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 19290 chr20:58693737:+ ONLY_REF_SPLICE YES 488 890 0.01 0.01 GT 1.7968 AG 1.7819 0.0135 1248 0
STX16--NPEPL1 3 0 3.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 521 36 0.01 0.11 GT 1.8062 AG 1.8256 0.0102 2729 0
MAP3K11--PCNX3 85 0 85.00 0.00 MAP3K11^ENSG00000173327.8 9692 chr11:65606691:- PCNX3^ENSG00000197136.4 30968 chr11:65630351:+ ONLY_REF_SPLICE YES 351 341 0.24 0.25 GT 1.9219 AG 1.9219 0.2878 1364 0
MAP3K11--PCNX3 1 0 1.00 0.00 MAP3K11^ENSG00000173327.8 9113 chr11:65607270:- PCNX3^ENSG00000197136.4 30968 chr11:65630351:+ ONLY_REF_SPLICE YES 104 341 0.02 0.01 GT 1.9219 AG 1.9219 0.0034 786 0
PCDHA11--PCDHAC1 85 0 42.50 0.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC1^ENSG00000248383.5 12566 chr5:140978949:+ INCL_NON_REF_SPLICE YES 7 10 10.75 7.82 GT 1.7819 AG 1.3996 0.1439 1419 0
PCDHA11--PCDHAC2 85 0 42.50 0.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC2^ENSG00000243232.6 11430 chr5:140978949:+ INCL_NON_REF_SPLICE YES 7 11 10.75 7.17 GT 1.7819 AG 1.3996 0.1439 1466 0
TLK2--AC240565.1 73 0 69.18 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 258 19 0.29 3.70 GT 1.8892 AG 1.8892 0.2342 1734 0
MOXD1--REPS1 58 1 58.00 0.98 MOXD1^ENSG00000079931.15 1313 chr6:132401163:- REPS1^ENSG00000135597.19 22963 chr6:138947913:- ONLY_REF_SPLICE YES 126 242 0.47 0.25 GT 1.7232 AG 1.8892 0.1997 1754 0
MOXD1--REPS1 1 1 1.00 0.02 MOXD1^ENSG00000079931.15 1313 chr6:132401163:- REPS1^ENSG00000135597.19 21844 chr6:138951160:- ONLY_REF_SPLICE NO 126 216 0.02 0.01 GT 1.7232 AG 1.7968 0.0035 1509 0
TLK2P1--AC110079.1 49 0 42.82 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 22 29 2.17 1.67 GT 1.7465 AG 1.8892 0.145 311 0
AC092807.3--DDAH1 44 0 44.00 0.00 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 113 45.00 0.39 GT 1.5628 AG 1.8062 0.149 3011 0
AC092807.3--DDAH1 23 0 23.00 0.00 AC092807.3^ENSG00000282057.1 1267 chr1:85577984:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 113 24.00 0.21 GT 1.8062 AG 1.8062 0.0779 2484 0
AC092807.3--DDAH1 1 0 1.00 0.00 AC092807.3^ENSG00000282057.1 9402 chr1:85488291:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 113 2.00 0.02 GT 1.8892 AG 1.8062 0.0034 2892 0
MGAT5--TANK 36 0 36.00 0.00 MGAT5^ENSG00000152127.9 8263 chr2:134336288:+ TANK^ENSG00000136560.14 39523 chr2:161204675:+ ONLY_REF_SPLICE YES 258 317 0.14 0.12 GT 1.8323 AG 1.8323 0.1219 3667 0
MGAT5--TANK 1 0 1.00 0.00 MGAT5^ENSG00000152127.9 1309 chr2:134120291:+ TANK^ENSG00000136560.14 39523 chr2:161204675:+ ONLY_REF_SPLICE YES 29 317 0.07 0.01 GT 1.8256 AG 1.8323 0.0034 2394 0
CDK5RAP2--RUNX1T1 32 0 32.00 0.00 CDK5RAP2^ENSG00000136861.18 31585 chr9:120437295:- RUNX1T1^ENSG00000079102.16 72941 chr8:91986972:- ONLY_REF_SPLICE YES 190 104 0.17 0.31 GT 1.9329 AG 1.9656 0.1083 830 0
CDK5RAP2--RUNX1T1 3 0 3.00 0.00 CDK5RAP2^ENSG00000136861.18 30352 chr9:120439399:- RUNX1T1^ENSG00000079102.16 72941 chr8:91986972:- ONLY_REF_SPLICE YES 159 104 0.03 0.04 GT 1.6402 AG 1.9656 0.0102 215 0
TVP23C--CDRT4 30 0 30.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 63 5 0.48 5.17 GT 1.9329 AG 1.9899 0.1016 1215 0
TVP23C--CDRT4 22 0 22.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 74 5 0.31 3.83 GT 1.9086 AG 1.9899 0.0745 1774 0
TVP23C--CDRT4 16 0 16.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 63 19 0.27 0.85 GT 1.9329 AG 1.6402 0.0542 137 0
TVP23C--CDRT4 7 0 7.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 74 19 0.11 0.40 GT 1.9086 AG 1.6402 0.0237 697 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 26 5 0.11 0.50 GT 1.8892 AG 1.9899 0.0068 1949 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 26 19 0.07 0.10 GT 1.8892 AG 1.6402 0.0034 873 0
ZNF324B--LINC02560 10 0 10.00 0.00 ZNF324B^ENSG00000249471.8 3212 chr19:58453822:+ LINC02560^ENSG00000268307.1 10300 chr19:58400297:+ INCL_NON_REF_SPLICE YES 96 0 0.11 11.00 GT 1.8892 AG 1.8062 0.0339 310 0
50 rows