File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/1dfd044477ad73de22e26468d53e7a/.command.err
Size
4.0 KB
Task
NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3)
Attempt

Content

View in new tab 
Loading annotation
Read 3041209 records
Warning in parseGtfAttribute("exon_number", exons) :
  Failed to parse 'exon_number' attribute of 8 record(s).
Loading protein domains
Read 134356 records
Drawing fusion #1: FGFR3:TACC3
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #2: FGFR3:TACC3
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #3: FGFR3:TACC3
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #4: FGFR3:TACC3
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #5: FGFR3:TACC3
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #6: PPME1:TCF7L2
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #7: PTPRK:RSPO3
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
Done