-ctat genome lib [/tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.OSpHKCggDM/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary
-sample contains 294038925 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir  -J /tmp/nxf.OSpHKCggDM/BVT_FFPE_TRNA_stm_06_A23WKFTLT4_1.Chimeric.out.junction  -O /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.OSpHKCggDM/BVT_FFPE_TRNA_stm_06_A23WKFTLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

[10000], rate=37500.00/min 
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[3330000], rate=46978.60/min -building interval tree based on /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[1280000], rate=24497.61/min 
[1290000], rate=24563.63/min 
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[1310000], rate=24701.45/min 
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[1480000], rate=26531.22/min 
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[1510000], rate=26900.24/min 
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[1540000], rate=27280.78/min 
[1550000], rate=27401.30/min 
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[1570000], rate=27657.08/min 
[1580000], rate=27784.29/min 
[1590000], rate=27886.58/min 
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[1610000], rate=28000.00/min 
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[1680000], rate=28644.50/min 
[1690000], rate=28757.80/min 
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[1710000], rate=28958.51/min 
[1720000], rate=29062.24/min 
[1730000], rate=29165.50/min 
[1740000], rate=29276.50/min 
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[1770000], rate=29606.91/min 
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[1830000], rate=30289.66/min 
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[1890000], rate=31009.02/min 
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[1920000], rate=31415.33/min 
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[1940000], rate=31690.72/min 
[1950000], rate=31819.42/min 
[1960000], rate=31965.21/min 
[1970000], rate=32110.84/min 
[1980000], rate=32256.31/min 
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[2000000], rate=32520.33/min 
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[2040000], rate=33018.61/min 
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[3300000], rate=39823.01/min 
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[3320000], rate=39967.90/min 
[3330000], rate=40056.13/min 
[3340000], rate=40128.15/min 
[3350000], rate=40200.00/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
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 4938461.54 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.OSpHKCggDM/BVT_FFPE_TRNA_stm_06_A23WKFTLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -616070.591948
EM: Round [1] log likelihood: -615656.761421
EM: Round [2] log likelihood: -615515.658420
EM: Round [3] log likelihood: -615449.450690
EM: Round [4] log likelihood: -615414.474204
EM: Round [5] log likelihood: -615394.750385
EM: Round [6] log likelihood: -615383.024626
EM: Round [7] log likelihood: -615375.690742
EM: Round [8] log likelihood: -615370.874112
EM: Round [9] log likelihood: -615367.565858
EM: Round [10] log likelihood: -615365.202636
EM: Round [11] log likelihood: -615363.457015
EM: Round [12] log likelihood: -615362.130708
EM: Round [13] log likelihood: -615361.098771
EM: Round [14] log likelihood: -615360.279524
EM: Round [15] log likelihood: -615359.617777
EM: Round [16] log likelihood: -615359.075144
EM: Round [17] log likelihood: -615358.624243
EM: Round [18] log likelihood: -615358.245117
EM: Round [19] log likelihood: -615357.922947
EM: Round [20] log likelihood: -615357.646541
EM: Round [21] log likelihood: -615357.407334
EM: Round [22] log likelihood: -615357.198676
EM: Round [23] log likelihood: -615357.015352
EM: Round [24] log likelihood: -615356.853225
EM: Round [25] log likelihood: -615356.708979
EM: Round [26] log likelihood: -615356.579935
EM: Round [27] log likelihood: -615356.463910
EM: Round [28] log likelihood: -615356.359108
EM: Round [29] log likelihood: -615356.264042
EM: Round [30] log likelihood: -615356.177473
EM: Round [31] log likelihood: -615356.098360
EM: Round [32] log likelihood: -615356.025823
EM: Round [33] log likelihood: -615355.959114
EM: Round [34] log likelihood: -615355.897594
EM: Round [35] log likelihood: -615355.840712
EM: Round [36] log likelihood: -615355.787994
EM: Round [37] log likelihood: -615355.739027
EM: Round [38] log likelihood: -615355.693451
EM: Round [39] log likelihood: -615355.650950
EM: Round [40] log likelihood: -615355.611247
EM: Round [41] log likelihood: -615355.574096
EM: Round [42] log likelihood: -615355.539280
EM: Round [43] log likelihood: -615355.506606
EM: Round [44] log likelihood: -615355.475901
EM: Round [45] log likelihood: -615355.447009
EM: Round [46] log likelihood: -615355.419792
EM: Round [47] log likelihood: -615355.394125
EM: Round [48] log likelihood: -615355.369893
EM: Round [49] log likelihood: -615355.346995
EM: Round [50] log likelihood: -615355.325338
EM: Round [51] log likelihood: -615355.304836
EM: Round [52] log likelihood: -615355.285412
EM: Round [53] log likelihood: -615355.266995
EM: Round [54] log likelihood: -615355.249520
EM: Round [55] log likelihood: -615355.232928
EM: Round [56] log likelihood: -615355.217163
EM: Round [57] log likelihood: -615355.202176
EM: Round [58] log likelihood: -615355.187920
EM: Round [59] log likelihood: -615355.174351
EM: Round [60] log likelihood: -615355.161430
EM: Round [61] log likelihood: -615355.149119
EM: Round [62] log likelihood: -615355.137384
EM: Round [63] log likelihood: -615355.126193
EM: Round [64] log likelihood: -615355.115517
EM: Round [65] log likelihood: -615355.105326
EM: Round [66] log likelihood: -615355.095596
EM: Round [67] log likelihood: -615355.086302
EM: Round [68] log likelihood: -615355.077421
EM: Round [69] log likelihood: -615355.068933
EM: Round [70] log likelihood: -615355.060816
EM: Round [71] log likelihood: -615355.053053
EM: Round [72] log likelihood: -615355.045625
EM: Round [73] log likelihood: -615355.038516
EM: Round [74] log likelihood: -615355.031711
EM: Round [75] log likelihood: -615355.025194
EM: Round [76] log likelihood: -615355.018952
EM: Round [77] log likelihood: -615355.012972
EM: Round [78] log likelihood: -615355.007242
EM: Round [79] log likelihood: -615355.001749
EM: Round [80] log likelihood: -615354.996483
EM: Round [81] log likelihood: -615354.991433
EM: Round [82] log likelihood: -615354.986589
EM: Round [83] log likelihood: -615354.981943
EM: Round [84] log likelihood: -615354.977485
EM: Round [85] log likelihood: -615354.973206
EM: Round [86] log likelihood: -615354.969099
EM: Round [87] log likelihood: -615354.965156
EM: Round [88] log likelihood: -615354.961370
EM: Round [89] log likelihood: -615354.957734
EM: Round [90] log likelihood: -615354.954242
EM: Round [91] log likelihood: -615354.950887
EM: Round [92] log likelihood: -615354.947664
EM: Round [93] log likelihood: -615354.944566
EM: Round [94] log likelihood: -615354.941589
EM: Round [95] log likelihood: -615354.938727
EM: Round [96] log likelihood: -615354.935976
EM: Round [97] log likelihood: -615354.933331
EM: Round [98] log likelihood: -615354.930787
EM: Round [99] log likelihood: -615354.928341
EM: Round [100] log likelihood: -615354.925988
EM: Round [101] log likelihood: -615354.923725
EM: Round [102] log likelihood: -615354.921547
EM: Round [103] log likelihood: -615354.919452
EM: Round [104] log likelihood: -615354.917435
EM: Round [105] log likelihood: -615354.915495
EM: Round [106] log likelihood: -615354.913627
EM: Round [107] log likelihood: -615354.911829
EM: Round [108] log likelihood: -615354.910098
EM: Round [109] log likelihood: -615354.908431
EM: Round [110] log likelihood: -615354.906826
EM: Round [111] log likelihood: -615354.905281
EM: Round [112] log likelihood: -615354.903792
EM: Round [113] log likelihood: -615354.902359
EM: Round [114] log likelihood: -615354.900977
EM: Round [115] log likelihood: -615354.899647
EM: Round [116] log likelihood: -615354.898365
EM: Round [117] log likelihood: -615354.897130
EM: Round [118] log likelihood: -615354.895940
EM: Round [119] log likelihood: -615354.894792
EM: Round [120] log likelihood: -615354.893687
EM: Round [121] log likelihood: -615354.892621
EM: Round [122] log likelihood: -615354.891594
EM: Round [123] log likelihood: -615354.890604
EM: Round [124] log likelihood: -615354.889649
EM: Round [125] log likelihood: -615354.888728
EM: Round [126] log likelihood: -615354.887840
EM: Round [127] log likelihood: -615354.886984
EM: Round [128] log likelihood: -615354.886158
EM: Round [129] log likelihood: -615354.885362
EM: Round [130] log likelihood: -615354.884594
EM: Round [131] log likelihood: -615354.883852
EM: Round [132] log likelihood: -615354.883137
EM: Round [133] log likelihood: -615354.882448
EM: Round [134] log likelihood: -615354.881782
EM: Round [135] log likelihood: -615354.881140
EM: Round [136] log likelihood: -615354.880520
EM: Round [137] log likelihood: -615354.879921
EM: Round [138] log likelihood: -615354.879344
EM: Round [139] log likelihood: -615354.878787
EM: Round [140] log likelihood: -615354.878248
EM: Round [141] log likelihood: -615354.877729
EM: Round [142] log likelihood: -615354.877228
EM: Round [143] log likelihood: -615354.876743
EM: Round [144] log likelihood: -615354.876276
EM: Round [145] log likelihood: -615354.875824
EM: Round [146] log likelihood: -615354.875388
EM: Round [147] log likelihood: -615354.874967
EM: Round [148] log likelihood: -615354.874560
EM: Round [149] log likelihood: -615354.874167
EM: Round [150] log likelihood: -615354.873787
EM: Round [151] log likelihood: -615354.873420
EM: Round [152] log likelihood: -615354.873066
EM: Round [153] log likelihood: -615354.872724
EM: Round [154] log likelihood: -615354.872393
EM: Round [155] log likelihood: -615354.872073
EM: Round [156] log likelihood: -615354.871764
EM: Round [157] log likelihood: -615354.871465
EM: Round [158] log likelihood: -615354.871176
EM: Round [159] log likelihood: -615354.870897
EM: Round [160] log likelihood: -615354.870627
EM: Round [161] log likelihood: -615354.870366
EM: Round [162] log likelihood: -615354.870114
EM: Round [163] log likelihood: -615354.869870
EM: Round [164] log likelihood: -615354.869634
EM: Round [165] log likelihood: -615354.869406
EM: Round [166] log likelihood: -615354.869185
EM: Round [167] log likelihood: -615354.868971
EM: Round [168] log likelihood: -615354.868765
EM: Round [169] log likelihood: -615354.868565
EM: Round [170] log likelihood: -615354.868372
EM: Round [171] log likelihood: -615354.868185
EM: Round [172] log likelihood: -615354.868004
EM: Round [173] log likelihood: -615354.867828
EM: Round [174] log likelihood: -615354.867659
EM: Round [175] log likelihood: -615354.867495
EM: Round [176] log likelihood: -615354.867336
EM: Round [177] log likelihood: -615354.867182
EM: Round [178] log likelihood: -615354.867033
EM: Round [179] log likelihood: -615354.866889
EM: Round [180] log likelihood: -615354.866749
EM: Round [181] log likelihood: -615354.866614
EM: Round [182] log likelihood: -615354.866483
EM: Round [183] log likelihood: -615354.866356
EM: Round [184] log likelihood: -615354.866234
EM: Round [185] log likelihood: -615354.866115
EM: Round [186] log likelihood: -615354.865999
EM: Round [187] log likelihood: -615354.865888
EM: Round [188] log likelihood: -615354.865779
EM: Round [189] log likelihood: -615354.865674
EM: Round [190] log likelihood: -615354.865573
EM: Round [191] log likelihood: -615354.865474
EM: Stopping iterations at round 191 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -614430.449892
EM: Round [1] log likelihood: -614117.769348
EM: Round [2] log likelihood: -614013.288829
EM: Round [3] log likelihood: -613965.264055
EM: Round [4] log likelihood: -613940.306360
EM: Round [5] log likelihood: -613926.414738
EM: Round [6] log likelihood: -613918.247934
EM: Round [7] log likelihood: -613913.188614
EM: Round [8] log likelihood: -613909.891529
EM: Round [9] log likelihood: -613907.640427
EM: Round [10] log likelihood: -613906.039634
EM: Round [11] log likelihood: -613904.861513
EM: Round [12] log likelihood: -613903.969431
EM: Round [13] log likelihood: -613903.277882
EM: Round [14] log likelihood: -613902.731220
EM: Round [15] log likelihood: -613902.291925
EM: Round [16] log likelihood: -613901.933905
EM: Round [17] log likelihood: -613901.638523
EM: Round [18] log likelihood: -613901.392163
EM: Round [19] log likelihood: -613901.184682
EM: Round [20] log likelihood: -613901.008400
EM: Round [21] log likelihood: -613900.857418
EM: Round [22] log likelihood: -613900.727149
EM: Round [23] log likelihood: -613900.613987
EM: Round [24] log likelihood: -613900.515065
EM: Round [25] log likelihood: -613900.428088
EM: Round [26] log likelihood: -613900.351202
EM: Round [27] log likelihood: -613900.282895
EM: Round [28] log likelihood: -613900.221928
EM: Round [29] log likelihood: -613900.167276
EM: Round [30] log likelihood: -613900.118090
EM: Round [31] log likelihood: -613900.073656
EM: Round [32] log likelihood: -613900.033377
EM: Round [33] log likelihood: -613899.996746
EM: Round [34] log likelihood: -613899.963331
EM: Round [35] log likelihood: -613899.932765
EM: Round [36] log likelihood: -613899.904732
EM: Round [37] log likelihood: -613899.878957
EM: Round [38] log likelihood: -613899.855207
EM: Round [39] log likelihood: -613899.833273
EM: Round [40] log likelihood: -613899.812977
EM: Round [41] log likelihood: -613899.794161
EM: Round [42] log likelihood: -613899.776687
EM: Round [43] log likelihood: -613899.760431
EM: Round [44] log likelihood: -613899.745285
EM: Round [45] log likelihood: -613899.731152
EM: Round [46] log likelihood: -613899.717948
EM: Round [47] log likelihood: -613899.705593
EM: Round [48] log likelihood: -613899.694021
EM: Round [49] log likelihood: -613899.683167
EM: Round [50] log likelihood: -613899.672977
EM: Round [51] log likelihood: -613899.663401
EM: Round [52] log likelihood: -613899.654391
EM: Round [53] log likelihood: -613899.645907
EM: Round [54] log likelihood: -613899.637911
EM: Round [55] log likelihood: -613899.630368
EM: Round [56] log likelihood: -613899.623247
EM: Round [57] log likelihood: -613899.616519
EM: Round [58] log likelihood: -613899.610158
EM: Round [59] log likelihood: -613899.604140
EM: Round [60] log likelihood: -613899.598443
EM: Round [61] log likelihood: -613899.593045
EM: Round [62] log likelihood: -613899.587928
EM: Round [63] log likelihood: -613899.583075
EM: Round [64] log likelihood: -613899.578469
EM: Round [65] log likelihood: -613899.574095
EM: Round [66] log likelihood: -613899.569940
EM: Round [67] log likelihood: -613899.565991
EM: Round [68] log likelihood: -613899.562235
EM: Round [69] log likelihood: -613899.558662
EM: Round [70] log likelihood: -613899.555262
EM: Round [71] log likelihood: -613899.552024
EM: Round [72] log likelihood: -613899.548939
EM: Round [73] log likelihood: -613899.545999
EM: Round [74] log likelihood: -613899.543197
EM: Round [75] log likelihood: -613899.540524
EM: Round [76] log likelihood: -613899.537974
EM: Round [77] log likelihood: -613899.535541
EM: Round [78] log likelihood: -613899.533218
EM: Round [79] log likelihood: -613899.530999
EM: Round [80] log likelihood: -613899.528880
EM: Round [81] log likelihood: -613899.526854
EM: Round [82] log likelihood: -613899.524918
EM: Round [83] log likelihood: -613899.523067
EM: Round [84] log likelihood: -613899.521297
EM: Round [85] log likelihood: -613899.519604
EM: Round [86] log likelihood: -613899.517983
EM: Round [87] log likelihood: -613899.516432
EM: Round [88] log likelihood: -613899.514946
EM: Round [89] log likelihood: -613899.513524
EM: Round [90] log likelihood: -613899.512162
EM: Round [91] log likelihood: -613899.510856
EM: Round [92] log likelihood: -613899.509605
EM: Round [93] log likelihood: -613899.508406
EM: Round [94] log likelihood: -613899.507256
EM: Round [95] log likelihood: -613899.506154
EM: Round [96] log likelihood: -613899.505096
EM: Round [97] log likelihood: -613899.504082
EM: Round [98] log likelihood: -613899.503108
EM: Round [99] log likelihood: -613899.502174
EM: Round [100] log likelihood: -613899.501277
EM: Round [101] log likelihood: -613899.500416
EM: Round [102] log likelihood: -613899.499589
EM: Round [103] log likelihood: -613899.498794
EM: Round [104] log likelihood: -613899.498031
EM: Round [105] log likelihood: -613899.497298
EM: Round [106] log likelihood: -613899.496593
EM: Round [107] log likelihood: -613899.495916
EM: Round [108] log likelihood: -613899.495265
EM: Round [109] log likelihood: -613899.494639
EM: Round [110] log likelihood: -613899.494037
EM: Round [111] log likelihood: -613899.493458
EM: Round [112] log likelihood: -613899.492901
EM: Round [113] log likelihood: -613899.492365
EM: Round [114] log likelihood: -613899.491849
EM: Round [115] log likelihood: -613899.491352
EM: Round [116] log likelihood: -613899.490874
EM: Round [117] log likelihood: -613899.490414
EM: Round [118] log likelihood: -613899.489971
EM: Round [119] log likelihood: -613899.489545
EM: Round [120] log likelihood: -613899.489134
EM: Round [121] log likelihood: -613899.488738
EM: Round [122] log likelihood: -613899.488356
EM: Round [123] log likelihood: -613899.487989
EM: Round [124] log likelihood: -613899.487634
EM: Round [125] log likelihood: -613899.487293
EM: Round [126] log likelihood: -613899.486964
EM: Round [127] log likelihood: -613899.486646
EM: Round [128] log likelihood: -613899.486340
EM: Round [129] log likelihood: -613899.486045
EM: Round [130] log likelihood: -613899.485760
EM: Round [131] log likelihood: -613899.485485
EM: Round [132] log likelihood: -613899.485220
EM: Round [133] log likelihood: -613899.484964
EM: Round [134] log likelihood: -613899.484717
EM: Round [135] log likelihood: -613899.484479
EM: Round [136] log likelihood: -613899.484249
EM: Round [137] log likelihood: -613899.484027
EM: Round [138] log likelihood: -613899.483812
EM: Round [139] log likelihood: -613899.483605
EM: Round [140] log likelihood: -613899.483405
EM: Round [141] log likelihood: -613899.483211
EM: Round [142] log likelihood: -613899.483024
EM: Round [143] log likelihood: -613899.482844
EM: Round [144] log likelihood: -613899.482669
EM: Round [145] log likelihood: -613899.482500
EM: Round [146] log likelihood: -613899.482337
EM: Round [147] log likelihood: -613899.482179
EM: Round [148] log likelihood: -613899.482027
EM: Round [149] log likelihood: -613899.481879
EM: Round [150] log likelihood: -613899.481737
EM: Round [151] log likelihood: -613899.481599
EM: Round [152] log likelihood: -613899.481465
EM: Round [153] log likelihood: -613899.481336
EM: Round [154] log likelihood: -613899.481210
EM: Round [155] log likelihood: -613899.481089
EM: Round [156] log likelihood: -613899.480972
EM: Round [157] log likelihood: -613899.480858
EM: Round [158] log likelihood: -613899.480749
EM: Round [159] log likelihood: -613899.480642
EM: Round [160] log likelihood: -613899.480539
EM: Round [161] log likelihood: -613899.480439
EM: Stopping iterations at round 161 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 294038925 > /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir > /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir --annotate /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir
-done, see /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1813, filtered: 13225)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.OSpHKCggDM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.OSpHKCggDM/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGL.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000233606.2]
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WARNING, no entry stored in dbm for [ENSG00000237037.9]
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WARNING, no entry stored in dbm for [ENSG00000275681.1]
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WARNING, no entry stored in dbm for [ENSG00000286948.1]
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WARNING, no entry stored in dbm for [ENSG00000231752.6]
WARNING, no entry stored in dbm for [ENSG00000223791.1]
WARNING, no entry stored in dbm for [ENSG00000250979.1]
WARNING, no entry stored in dbm for [ENSG00000227591.5]
WARNING, no entry stored in dbm for [ENSG00000131002.12]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000229298.1]
WARNING, no entry stored in dbm for [ENSG00000227400.2]
WARNING, no entry stored in dbm for [ENSG00000205231.1]
WARNING, no entry stored in dbm for [ENSG00000244257.5]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000228111.1]
WARNING, no entry stored in dbm for [ENSG00000231324.1]
WARNING, no entry stored in dbm for [ENSG00000233593.10]
WARNING, no entry stored in dbm for [ENSG00000246582.3]
WARNING, no entry stored in dbm for [ENSG00000225793.3]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000260898.6]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000231649.3]
WARNING, no entry stored in dbm for [ENSG00000240288.8]
WARNING, no entry stored in dbm for [ENSG00000241359.1]
WARNING, no entry stored in dbm for [ENSG00000210164.1]
WARNING, no entry stored in dbm for [ENSG00000227249.1]
WARNING, no entry stored in dbm for [ENSG00000258493.2]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000239827.8]
WARNING, no entry stored in dbm for [ENSG00000242882.1]
WARNING, no entry stored in dbm for [ENSG00000236005.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000207007.1]
WARNING, no entry stored in dbm for [ENSG00000206635.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000276721.1]
WARNING, no entry stored in dbm for [ENSG00000231812.1]
WARNING, no entry stored in dbm for [ENSG00000251235.3]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000286630.1]
WARNING, no entry stored in dbm for [ENSG00000264247.2]
WARNING, no entry stored in dbm for [ENSG00000228999.4]
WARNING, no entry stored in dbm for [ENSG00000286818.1]
WARNING, no entry stored in dbm for [ENSG00000232024.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000286511.1]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000279300.1]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
WARNING, no entry stored in dbm for [ENSG00000280466.1]
WARNING, no entry stored in dbm for [ENSG00000207052.1]
WARNING, no entry stored in dbm for [ENSG00000231815.2]
WARNING, no entry stored in dbm for [ENSG00000218351.2]
WARNING, no entry stored in dbm for [ENSG00000214389.2]
WARNING, no entry stored in dbm for [ENSG00000232142.1]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000238069.1]
WARNING, no entry stored in dbm for [ENSG00000244705.1]
WARNING, no entry stored in dbm for [ENSG00000214485.6]
WARNING, no entry stored in dbm for [ENSG00000277448.1]
WARNING, no entry stored in dbm for [ENSG00000231490.1]
WARNING, no entry stored in dbm for [ENSG00000251137.1]
WARNING, no entry stored in dbm for [ENSG00000232228.1]
WARNING, no entry stored in dbm for [ENSG00000212664.5]
WARNING, no entry stored in dbm for [ENSG00000234524.1]
WARNING, no entry stored in dbm for [ENSG00000229824.1]
WARNING, no entry stored in dbm for [ENSG00000201377.1]
WARNING, no entry stored in dbm for [ENSG00000252316.1]
WARNING, no entry stored in dbm for [ENSG00000207019.1]
WARNING, no entry stored in dbm for [ENSG00000198155.5]
WARNING, no entry stored in dbm for [ENSG00000227388.3]
WARNING, no entry stored in dbm for [ENSG00000201148.1]
WARNING, no entry stored in dbm for [ENSG00000243488.3]
WARNING, no entry stored in dbm for [ENSG00000226440.7]
WARNING, no entry stored in dbm for [ENSG00000227388.3]
WARNING, no entry stored in dbm for [ENSG00000172900.12]
WARNING, no entry stored in dbm for [ENSG00000225279.2]
WARNING, no entry stored in dbm for [ENSG00000279331.1]
WARNING, no entry stored in dbm for [ENSG00000283123.1]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000273062.1]
WARNING, no entry stored in dbm for [ENSG00000258577.1]
WARNING, no entry stored in dbm for [ENSG00000234044.1]
WARNING, no entry stored in dbm for [ENSG00000280414.1]
WARNING, no entry stored in dbm for [ENSG00000285601.1]
WARNING, no entry stored in dbm for [ENSG00000224074.3]
WARNING, no entry stored in dbm for [ENSG00000204261.9]
WARNING, no entry stored in dbm for [ENSG00000239636.1]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000249131.2]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000204685.7]
WARNING, no entry stored in dbm for [ENSG00000233360.4]
WARNING, no entry stored in dbm for [ENSG00000278231.1]
WARNING, no entry stored in dbm for [ENSG00000241472.7]
WARNING, no entry stored in dbm for [ENSG00000237438.7]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000250896.1]
WARNING, no entry stored in dbm for [ENSG00000226633.2]
WARNING, no entry stored in dbm for [ENSG00000217094.2]
WARNING, no entry stored in dbm for [ENSG00000238121.6]
WARNING, no entry stored in dbm for [ENSG00000255240.6]
WARNING, no entry stored in dbm for [ENSG00000282164.3]
WARNING, no entry stored in dbm for [ENSG00000237399.7]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000287736.1]
WARNING, no entry stored in dbm for [ENSG00000254076.1]
WARNING, no entry stored in dbm for [ENSG00000237094.12]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000267433.1]
WARNING, no entry stored in dbm for [ENSG00000215546.2]
WARNING, no entry stored in dbm for [ENSG00000227627.3]
WARNING, no entry stored in dbm for [ENSG00000255875.2]
WARNING, no entry stored in dbm for [ENSG00000259917.1]
WARNING, no entry stored in dbm for [ENSG00000255642.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000271913.7]
WARNING, no entry stored in dbm for [ENSG00000287765.1]
WARNING, no entry stored in dbm for [ENSG00000260958.3]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000226624.1]
WARNING, no entry stored in dbm for [ENSG00000181355.21]
WARNING, no entry stored in dbm for [ENSG00000225484.7]
WARNING, no entry stored in dbm for [ENSG00000285257.1]
WARNING, no entry stored in dbm for [ENSG00000225216.6]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000215154.6]
WARNING, no entry stored in dbm for [ENSG00000263015.1]
WARNING, no entry stored in dbm for [ENSG00000261691.1]
WARNING, no entry stored in dbm for [ENSG00000233382.7]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000234226.5]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000269054.2]
WARNING, no entry stored in dbm for [ENSG00000197927.13]
WARNING, no entry stored in dbm for [ENSG00000287151.1]
WARNING, no entry stored in dbm for [ENSG00000229119.3]
WARNING, no entry stored in dbm for [ENSG00000232508.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000283879.1]
WARNING, no entry stored in dbm for [ENSG00000232436.1]
WARNING, no entry stored in dbm for [ENSG00000236951.5]
WARNING, no entry stored in dbm for [ENSG00000225133.1]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000288052.1]
WARNING, no entry stored in dbm for [ENSG00000229641.1]
WARNING, no entry stored in dbm for [ENSG00000215720.4]
WARNING, no entry stored in dbm for [ENSG00000253642.6]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000237667.7]
WARNING, no entry stored in dbm for [ENSG00000251199.6]
WARNING, no entry stored in dbm for [ENSG00000258535.1]
WARNING, no entry stored in dbm for [ENSG00000231131.8]
WARNING, no entry stored in dbm for [ENSG00000204241.8]
WARNING, no entry stored in dbm for [ENSG00000251129.2]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000283422.1]
WARNING, no entry stored in dbm for [ENSG00000248238.2]
WARNING, no entry stored in dbm for [ENSG00000206187.4]
WARNING, no entry stored in dbm for [ENSG00000258404.1]
WARNING, no entry stored in dbm for [ENSG00000257556.2]
WARNING, no entry stored in dbm for [ENSG00000254689.3]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000236052.2]
WARNING, no entry stored in dbm for [ENSG00000237476.1]
WARNING, no entry stored in dbm for [ENSG00000205786.8]
WARNING, no entry stored in dbm for [ENSG00000225434.3]
WARNING, no entry stored in dbm for [ENSG00000249484.9]
WARNING, no entry stored in dbm for [ENSG00000234380.2]
WARNING, no entry stored in dbm for [ENSG00000226891.9]
WARNING, no entry stored in dbm for [ENSG00000228308.2]
WARNING, no entry stored in dbm for [ENSG00000274020.4]
WARNING, no entry stored in dbm for [ENSG00000229723.1]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000223546.7]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000226519.2]
WARNING, no entry stored in dbm for [ENSG00000226846.2]
WARNING, no entry stored in dbm for [ENSG00000236871.7]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000214765.8]
WARNING, no entry stored in dbm for [ENSG00000231203.1]
WARNING, no entry stored in dbm for [ENSG00000239569.3]
WARNING, no entry stored in dbm for [ENSG00000260303.1]
WARNING, no entry stored in dbm for [ENSG00000228384.4]
WARNING, no entry stored in dbm for [ENSG00000231304.2]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000271646.1]
WARNING, no entry stored in dbm for [ENSG00000259954.1]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000280257.1]
WARNING, no entry stored in dbm for [ENSG00000270864.1]
WARNING, no entry stored in dbm for [ENSG00000261834.2]
WARNING, no entry stored in dbm for [ENSG00000250961.2]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000220867.1]
WARNING, no entry stored in dbm for [ENSG00000225158.2]
WARNING, no entry stored in dbm for [ENSG00000234878.1]
WARNING, no entry stored in dbm for [ENSG00000284613.1]
WARNING, no entry stored in dbm for [ENSG00000230216.1]
WARNING, no entry stored in dbm for [ENSG00000273420.1]
WARNING, no entry stored in dbm for [ENSG00000226068.1]
WARNING, no entry stored in dbm for [ENSG00000237682.2]
WARNING, no entry stored in dbm for [ENSG00000251400.1]
WARNING, no entry stored in dbm for [ENSG00000229391.7]
WARNING, no entry stored in dbm for [ENSG00000269907.1]
WARNING, no entry stored in dbm for [ENSG00000288595.1]
WARNING, no entry stored in dbm for [ENSG00000234466.1]
WARNING, no entry stored in dbm for [ENSG00000232226.2]
WARNING, no entry stored in dbm for [ENSG00000232226.2]
WARNING, no entry stored in dbm for [ENSG00000277232.2]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000239533.6]
WARNING, no entry stored in dbm for [ENSG00000244480.1]
WARNING, no entry stored in dbm for [ENSG00000204685.7]
WARNING, no entry stored in dbm for [ENSG00000223806.8]
WARNING, no entry stored in dbm for [ENSG00000284747.1]
WARNING, no entry stored in dbm for [ENSG00000227301.1]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000267478.1]
WARNING, no entry stored in dbm for [ENSG00000214548.18]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000286742.1]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000261485.1]
WARNING, no entry stored in dbm for [ENSG00000256612.7]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000234537.1]
WARNING, no entry stored in dbm for [ENSG00000260565.7]
WARNING, no entry stored in dbm for [ENSG00000224709.2]
WARNING, no entry stored in dbm for [ENSG00000215154.6]
WARNING, no entry stored in dbm for [ENSG00000227070.1]
WARNING, no entry stored in dbm for [ENSG00000224722.3]
WARNING, no entry stored in dbm for [ENSG00000247828.8]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000237986.4]
WARNING, no entry stored in dbm for [ENSG00000264243.1]
WARNING, no entry stored in dbm for [ENSG00000282882.2]
WARNING, no entry stored in dbm for [ENSG00000248663.6]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000263934.5]
WARNING, no entry stored in dbm for [ENSG00000288056.1]
WARNING, no entry stored in dbm for [ENSG00000259295.6]
WARNING, no entry stored in dbm for [ENSG00000253821.2]
WARNING, no entry stored in dbm for [ENSG00000203781.4]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000245164.8]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000280594.1]
WARNING, no entry stored in dbm for [ENSG00000271913.7]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000261400.1]
WARNING, no entry stored in dbm for [ENSG00000258471.2]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000260318.1]
WARNING, no entry stored in dbm for [ENSG00000244055.2]
WARNING, no entry stored in dbm for [ENSG00000261801.6]
WARNING, no entry stored in dbm for [ENSG00000201586.1]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000258053.1]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000276027.1]
WARNING, no entry stored in dbm for [ENSG00000250896.1]
WARNING, no entry stored in dbm for [ENSG00000228541.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000243176.6]
WARNING, no entry stored in dbm for [ENSG00000279968.3]
WARNING, no entry stored in dbm for [ENSG00000250266.2]
WARNING, no entry stored in dbm for [ENSG00000224186.8]
WARNING, no entry stored in dbm for [ENSG00000285413.1]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000264112.1]
WARNING, no entry stored in dbm for [ENSG00000250405.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000203930.12]
WARNING, no entry stored in dbm for [ENSG00000241356.2]
WARNING, no entry stored in dbm for [ENSG00000225450.1]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000257167.2]
WARNING, no entry stored in dbm for [ENSG00000227590.2]
WARNING, no entry stored in dbm for [ENSG00000224973.6]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000236017.8]
WARNING, no entry stored in dbm for [ENSG00000225588.2]
WARNING, no entry stored in dbm for [ENSG00000285604.1]
WARNING, no entry stored in dbm for [ENSG00000255540.1]
WARNING, no entry stored in dbm for [ENSG00000285693.1]
WARNING, no entry stored in dbm for [ENSG00000257086.1]
WARNING, no entry stored in dbm for [ENSG00000179967.11]
WARNING, no entry stored in dbm for [ENSG00000285413.1]
WARNING, no entry stored in dbm for [ENSG00000254602.2]
WARNING, no entry stored in dbm for [ENSG00000285388.1]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000235275.3]
WARNING, no entry stored in dbm for [ENSG00000277878.1]
WARNING, no entry stored in dbm for [ENSG00000226674.11]
WARNING, no entry stored in dbm for [ENSG00000263934.5]
WARNING, no entry stored in dbm for [ENSG00000217315.1]
WARNING, no entry stored in dbm for [ENSG00000231100.1]
WARNING, no entry stored in dbm for [ENSG00000215840.3]
WARNING, no entry stored in dbm for [ENSG00000240291.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000287811.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000237468.2]
WARNING, no entry stored in dbm for [ENSG00000224356.5]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000279154.1]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000239665.8]
WARNING, no entry stored in dbm for [ENSG00000226070.1]
WARNING, no entry stored in dbm for [ENSG00000223429.1]
WARNING, no entry stored in dbm for [ENSG00000244471.6]
WARNING, no entry stored in dbm for [ENSG00000280162.1]
WARNING, no entry stored in dbm for [ENSG00000286142.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [ENSG00000230725.6]
WARNING, no entry stored in dbm for [ENSG00000260425.1]
WARNING, no entry stored in dbm for [ENSG00000280434.1]
WARNING, no entry stored in dbm for [ENSG00000226532.1]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000223546.7]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000286437.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000224097.5]
WARNING, no entry stored in dbm for [ENSG00000213144.2]
WARNING, no entry stored in dbm for [ENSG00000213091.2]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000275140.1]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000237017.1]
WARNING, no entry stored in dbm for [ENSG00000266903.2]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000266466.1]
WARNING, no entry stored in dbm for [ENSG00000287311.1]
WARNING, no entry stored in dbm for [ENSG00000249592.6]
WARNING, no entry stored in dbm for [ENSG00000267924.1]
WARNING, no entry stored in dbm for [ENSG00000237506.3]
WARNING, no entry stored in dbm for [ENSG00000262898.3]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000272556.2]
WARNING, no entry stored in dbm for [ENSG00000265798.6]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000228205.1]
WARNING, no entry stored in dbm for [ENSG00000223518.5]
WARNING, no entry stored in dbm for [ENSG00000259925.1]
WARNING, no entry stored in dbm for [ENSG00000250899.3]
WARNING, no entry stored in dbm for [ENSG00000258334.1]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000244236.3]
WARNING, no entry stored in dbm for [ENSG00000248752.3]
WARNING, no entry stored in dbm for [ENSG00000249743.6]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000250405.2]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000274092.1]
WARNING, no entry stored in dbm for [ENSG00000250241.6]
WARNING, no entry stored in dbm for [ENSG00000267482.1]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000145063.15]
WARNING, no entry stored in dbm for [ENSG00000287197.1]
WARNING, no entry stored in dbm for [ENSG00000267980.1]
WARNING, no entry stored in dbm for [ENSG00000251411.1]
WARNING, no entry stored in dbm for [ENSG00000286879.1]
WARNING, no entry stored in dbm for [ENSG00000285882.1]
WARNING, no entry stored in dbm for [ENSG00000265401.1]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000249359.3]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000223523.1]
WARNING, no entry stored in dbm for [ENSG00000261235.1]
WARNING, no entry stored in dbm for [ENSG00000240519.1]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000259721.1]
WARNING, no entry stored in dbm for [ENSG00000287335.1]
WARNING, no entry stored in dbm for [ENSG00000254316.1]
WARNING, no entry stored in dbm for [ENSG00000253553.7]
WARNING, no entry stored in dbm for [ENSG00000279483.2]
WARNING, no entry stored in dbm for [ENSG00000286258.1]
WARNING, no entry stored in dbm for [ENSG00000277654.6]
WARNING, no entry stored in dbm for [ENSG00000226377.2]
WARNING, no entry stored in dbm for [ENSG00000240207.7]
WARNING, no entry stored in dbm for [ENSG00000240207.7]
WARNING, no entry stored in dbm for [ENSG00000272368.2]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000278973.1]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000287671.1]
WARNING, no entry stored in dbm for [ENSG00000288565.1]
WARNING, no entry stored in dbm for [ENSG00000224668.1]
WARNING, no entry stored in dbm for [ENSG00000266365.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000259804.1]
WARNING, no entry stored in dbm for [ENSG00000287431.1]
WARNING, no entry stored in dbm for [ENSG00000224647.2]
WARNING, no entry stored in dbm for [ENSG00000225159.1]
WARNING, no entry stored in dbm for [ENSG00000232115.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000248569.1]
WARNING, no entry stored in dbm for [ENSG00000257681.1]
WARNING, no entry stored in dbm for [ENSG00000274798.1]
WARNING, no entry stored in dbm for [ENSG00000287555.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000271333.1]
WARNING, no entry stored in dbm for [ENSG00000272384.1]
WARNING, no entry stored in dbm for [ENSG00000288604.1]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000279611.1]
WARNING, no entry stored in dbm for [ENSG00000228007.1]
WARNING, no entry stored in dbm for [ENSG00000228007.1]
WARNING, no entry stored in dbm for [ENSG00000240426.1]
WARNING, no entry stored in dbm for [ENSG00000267030.1]
WARNING, no entry stored in dbm for [ENSG00000269802.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000286608.1]
WARNING, no entry stored in dbm for [ENSG00000288585.1]
WARNING, no entry stored in dbm for [ENSG00000227292.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000260927.2]
WARNING, no entry stored in dbm for [ENSG00000280152.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000287309.1]
WARNING, no entry stored in dbm for [ENSG00000250155.2]
WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000253965.1]
WARNING, no entry stored in dbm for [ENSG00000243225.2]
WARNING, no entry stored in dbm for [ENSG00000258272.1]
WARNING, no entry stored in dbm for [ENSG00000286739.1]
WARNING, no entry stored in dbm for [ENSG00000286739.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000272719.1]
WARNING, no entry stored in dbm for [ENSG00000242593.7]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000264990.1]
WARNING, no entry stored in dbm for [ENSG00000279601.1]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000238228.1]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000214870.9]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
WARNING, no entry stored in dbm for [ENSG00000234969.1]
WARNING, no entry stored in dbm for [ENSG00000271394.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.OSpHKCggDM/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)