.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/124b990cb4b98a5fcc287d83845fd6/.command.log
Size: 728 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/3315d0b46f11063838d47d8afce264/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/124b990cb4b98a5fcc287d83845fd6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/124b990cb4b98a5fcc287d83845fd6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/3315d0b46f11063838d47d8afce264/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3.md.bam
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3.md.bai