[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_brn_01_A23WKFTLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	246496485
Known Splicing Events:	244220950
Partial Novel Splicing Events:	1360288
Novel Splicing Events:	798826
Filtered Splicing Events:	116421

Total splicing  Junctions:	363386
Known Splicing Junctions:	230462
Partial Novel Splicing Junctions:	74597
Novel Splicing Junctions:	58327

===================================================================
Create BED file ...
Create Interact file ...