Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/e9cbd4227edd6e6583339bbdfea663/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/0432dc9fc125ec3401869ee5bdc3e9/BVT_FFPE_TRNA_thy_02_A23WKFTLT4_3.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/e9cbd4227edd6e6583339bbdfea663/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  BVT_FFPE_TRNA_thy_02_A23WKFTLT4_3: vaf_p90=1.000000 -> CLEAN

Output saved to: BVT_FFPE_TRNA_thy_02_A23WKFTLT4_3.predictions.csv
Summary: 0/1 samples flagged as contaminated