Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/94fcc4aed81362f04daa0cfbe0a79f/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/18170299ca86b3649b731b11b6cc48/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1.Chimeric.out.junction
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/94fcc4aed81362f04daa0cfbe0a79f/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/0ad8ae659b7926b971acdc88d351f2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/0ad8ae659b7926b971acdc88d351f2/.command.run
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.MUZ8PAPt3X/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary
-sample contains 268802929 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir  -J /tmp/nxf.MUZ8PAPt3X/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1.Chimeric.out.junction  -O /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.MUZ8PAPt3X/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2520000], rate=39926.06/min 
[2530000], rate=40010.54/min 
[2540000], rate=40094.71/min 
[2550000], rate=40189.13/min 
[2560000], rate=40283.24/min 
[2570000], rate=40366.49/min 
[2580000], rate=40449.44/min 
[2590000], rate=40532.08/min 
[2600000], rate=40635.58/min 
[2610000], rate=40728.22/min 
[2620000], rate=40788.79/min 
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[2640000], rate=40919.66/min 
[2650000], rate=41064.05/min 
[2660000], rate=41134.02/min 
[2670000], rate=41203.70/min 
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[2690000], rate=41352.81/min 
[2700000], rate=41421.63/min 
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[2720000], rate=41867.62/min 
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[2740000], rate=41981.61/min 
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[2770000], rate=42214.88/min 
[2780000], rate=42281.37/min 
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[2800000], rate=42434.96/min 
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[2820000], rate=42619.65/min 
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[2840000], rate=42803.32/min 
[2850000], rate=42889.39/min 
[2860000], rate=42964.45/min 
[2870000], rate=43039.24/min -building interval tree based on /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=20689.66/min 
[20000], rate=19672.13/min 
[30000], rate=16822.43/min 
[40000], rate=16551.72/min 
[50000], rate=17647.06/min 
[60000], rate=19148.94/min 
[70000], rate=20487.80/min 
[80000], rate=21333.33/min 
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[100000], rate=23529.41/min 
[110000], rate=24264.71/min 
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[990000], rate=27049.18/min 
[1000000], rate=27198.55/min 
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[1430000], rate=30512.09/min 
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[1480000], rate=31038.10/min 
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[1500000], rate=31045.19/min 
[1510000], rate=31069.96/min 
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[1530000], rate=31129.20/min 
[1540000], rate=31174.09/min 
[1550000], rate=31239.50/min 
[1560000], rate=31377.81/min 
[1570000], rate=31515.56/min 
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[1590000], rate=31768.23/min 
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[1610000], rate=32050.43/min 
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[1670000], rate=33080.22/min 
[1680000], rate=33201.58/min 
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[1720000], rate=33692.46/min 
[1730000], rate=33855.19/min 
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[1750000], rate=34213.10/min 
[1760000], rate=34341.46/min 
[1770000], rate=34435.80/min 
[1780000], rate=34607.91/min 
[1790000], rate=34791.06/min 
[1800000], rate=34951.46/min 
[1810000], rate=35100.19/min 
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[1980000], rate=37229.71/min 
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[2000000], rate=37186.24/min 
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[2080000], rate=37749.55/min 
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[2100000], rate=37894.74/min 
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[2120000], rate=38049.66/min 
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[2150000], rate=38290.29/min 
[2160000], rate=38377.26/min 
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[2180000], rate=38561.32/min 
[2190000], rate=38669.81/min 
[2200000], rate=38766.52/min 
[2210000], rate=38874.23/min 
[2220000], rate=38981.56/min 
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[2240000], rate=39160.84/min 
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[2280000], rate=39549.00/min 
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[2330000], rate=39347.03/min 
[2340000], rate=39283.72/min 
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[2360000], rate=39137.65/min 
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[2380000], rate=39048.40/min 
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[2410000], rate=38954.74/min 
[2420000], rate=38927.61/min 
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[2450000], rate=38796.52/min 
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[2480000], rate=38739.91/min 
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[2500000], rate=38749.68/min 
[2510000], rate=38764.48/min 
[2520000], rate=38789.12/min 
[2530000], rate=38823.53/min 
[2540000], rate=38857.73/min 
[2550000], rate=38891.71/min 
[2560000], rate=38925.49/min 
[2570000], rate=38968.92/min 
[2580000], rate=39012.10/min 
[2590000], rate=39074.68/min 
[2600000], rate=39117.35/min 
[2610000], rate=39169.58/min 
[2620000], rate=39221.56/min 
[2630000], rate=39283.05/min 
[2640000], rate=39334.49/min 
[2650000], rate=39395.44/min 
[2660000], rate=39456.12/min 
[2670000], rate=39526.28/min 
[2680000], rate=39596.16/min 
[2690000], rate=39675.52/min 
[2700000], rate=39764.36/min 
[2710000], rate=39843.18/min 
[2720000], rate=41590.21/min 
[2730000], rate=41679.39/min 
[2740000], rate=41662.44/min 
[2750000], rate=41561.71/min 
[2760000], rate=41493.36/min 
[2770000], rate=41425.72/min 
[2780000], rate=41379.31/min 
[2790000], rate=41323.13/min 
[2800000], rate=41267.50/min 
[2810000], rate=41222.49/min 
[2820000], rate=41177.90/min 
[2830000], rate=41143.69/min 
[2840000], rate=41149.48/min 
[2850000], rate=41165.14/min [2720000], rate=39921.72/min 
[2730000], rate=40000.00/min 
[2740000], rate=40087.78/min 
[2750000], rate=40175.31/min 
[2760000], rate=40262.58/min 
[2770000], rate=40359.40/min 
[2780000], rate=40455.98/min 
[2790000], rate=40454.33/min 
[2800000], rate=40472.18/min 
[2810000], rate=40480.19/min 
[2820000], rate=40497.85/min 
[2830000], rate=40525.06/min 
[2840000], rate=40561.77/min 
[2850000], rate=40588.65/min 
[2860000], rate=40615.38/min 
[2870000], rate=40651.56/min -building interval tree based on /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

[10000], rate=85714.29/min 
[20000], rate=57142.86/min 
[30000], rate=62068.97/min 
[40000], rate=60000.00/min 
[50000], rate=66666.67/min 
[60000], rate=80000.00/min 
[70000], rate=73684.21/min 
[80000], rate=71641.79/min 
[90000], rate=79411.76/min 
[100000], rate=75949.37/min 
[110000], rate=73333.33/min 
[120000], rate=74226.80/min 
[130000], rate=73584.91/min 
[140000], rate=75675.68/min 
[150000], rate=81081.08/min 
[160000], rate=79338.84/min 
[170000], rate=79687.50/min 
[180000], rate=83720.93/min 
[190000], rate=82014.39/min 
[200000], rate=79470.20/min 
[210000], rate=76363.64/min 
[220000], rate=74157.30/min 
[230000], rate=73015.87/min 
[240000], rate=73846.15/min 
[250000], rate=75757.58/min 
[260000], rate=77611.94/min 
[270000], rate=78260.87/min 
[280000], rate=79245.28/min 
[290000], rate=77678.57/min 
[300000], rate=75313.81/min 
[310000], rate=74698.80/min 
[320000], rate=75294.12/min 
[330000], rate=75862.07/min 
[340000], rate=77862.60/min 
[350000], rate=78651.69/min 
[360000], rate=79120.88/min 
[370000], rate=78445.23/min 
[380000], rate=67256.64/min 
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[400000], rate=49180.33/min 
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[420000], rate=38066.47/min 
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[440000], rate=35059.76/min 
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[660000], rate=23627.68/min 
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[680000], rate=23050.85/min 
[690000], rate=23115.58/min 
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[770000], rate=21438.52/min 
[780000], rate=21379.63/min 
[790000], rate=21506.35/min 
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[810000], rate=21744.97/min 
[820000], rate=21866.67/min 
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[840000], rate=21970.36/min 
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[860000], rate=22212.66/min 
[870000], rate=22307.69/min 
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[910000], rate=22469.14/min 
[920000], rate=22429.91/min 
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[940000], rate=22266.09/min 
[950000], rate=22344.18/min 
[960000], rate=22403.73/min 
[970000], rate=22471.04/min 
[980000], rate=22563.32/min 
[990000], rate=22628.57/min 
[1000000], rate=22701.48/min 
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[1030000], rate=22687.22/min 
[1040000], rate=22616.89/min 
[1050000], rate=22572.55/min 
[1060000], rate=22481.44/min 
[1070000], rate=22408.38/min 
[1080000], rate=22344.83/min 
[1090000], rate=22290.39/min 
[1100000], rate=22372.88/min 
[1110000], rate=22469.64/min 
[1120000], rate=22565.48/min 
[1130000], rate=22615.08/min 
[1140000], rate=22694.09/min 
[1150000], rate=22764.76/min 
[1160000], rate=22834.65/min 
[1170000], rate=22941.18/min 
[1180000], rate=23031.88/min 
[1190000], rate=23144.25/min 
[1200000], rate=23255.81/min 
[1210000], rate=23366.59/min 
[1220000], rate=23476.59/min 
[1230000], rate=23563.22/min 
[1240000], rate=23679.19/min 
[1250000], rate=23794.42/min 
[1260000], rate=23908.92/min 
[1270000], rate=24015.13/min 
[1280000], rate=24135.76/min 
[1290000], rate=24248.12/min 
[1300000], rate=24359.78/min 
[1310000], rate=24478.36/min 
[1320000], rate=24603.91/min 
[1330000], rate=24705.88/min 
[1340000], rate=24791.86/min 
[1350000], rate=24915.41/min 
[1360000], rate=25030.67/min 
[1370000], rate=25160.70/min 
[1380000], rate=25282.44/min 
[1390000], rate=25403.59/min 
[1400000], rate=25524.16/min 
[1410000], rate=25651.91/min 
[1420000], rate=25779.12/min 
[1430000], rate=25913.62/min 
[1440000], rate=26039.78/min 
[1450000], rate=26086.96/min 
[1460000], rate=26133.65/min 
[1470000], rate=26187.65/min 
[1480000], rate=26241.13/min 
[1490000], rate=26309.59/min 
[1500000], rate=26369.76/min 
[1510000], rate=26452.55/min 
[1520000], rate=26519.34/min 
[1530000], rate=26600.99/min 
[1540000], rate=26674.36/min 
[1550000], rate=26747.20/min 
[1560000], rate=26842.56/min 
[1570000], rate=26945.08/min 
[1580000], rate=27031.65/min 
[1590000], rate=27109.97/min 
[1600000], rate=27187.77/min 
[1610000], rate=27272.73/min 
[1620000], rate=27364.86/min 
[1630000], rate=27456.49/min 
[1640000], rate=27547.59/min 
[1650000], rate=27645.91/min 
[1660000], rate=27751.46/min 
[1670000], rate=27841.07/min 
[1680000], rate=27937.92/min 
[1690000], rate=28034.28/min 
[1700000], rate=28130.17/min 
[1710000], rate=28233.35/min 
[1720000], rate=28336.08/min 
[1730000], rate=28438.36/min 
[1740000], rate=28547.99/min 
[1750000], rate=28657.21/min 
[1760000], rate=28758.17/min 
[1770000], rate=28874.39/min 
[1780000], rate=28974.50/min 
[1790000], rate=28886.50/min 
[1800000], rate=28830.75/min 
[1810000], rate=28768.21/min 
[1820000], rate=28736.84/min 
[1830000], rate=28698.38/min 
[1840000], rate=28667.88/min 
[1850000], rate=28637.77/min 
[1860000], rate=28622.72/min 
[1870000], rate=28615.15/min 
[1880000], rate=28622.18/min 
[1890000], rate=28629.13/min 
[1900000], rate=28664.82/min 
[1910000], rate=28685.86/min 
[1920000], rate=28721.02/min 
[1930000], rate=28755.90/min 
[1940000], rate=28783.38/min 
[1950000], rate=28824.83/min 
[1960000], rate=28873.07/min 
[1970000], rate=28920.97/min 
[1980000], rate=28982.68/min 
[1990000], rate=29036.96/min 
[2000000], rate=29105.02/min 
[2010000], rate=29179.77/min 
[2020000], rate=29254.16/min 
[2030000], rate=29335.26/min 
[2040000], rate=29416.01/min 
[2050000], rate=29489.33/min 
[2060000], rate=29548.17/min 
[2070000], rate=29606.67/min 
[2080000], rate=29664.84/min 
[2090000], rate=29722.68/min 
[2100000], rate=29787.23/min 
[2110000], rate=29851.45/min 
[2120000], rate=29915.33/min 
[2130000], rate=29978.89/min 
[2140000], rate=30049.15/min 
[2150000], rate=30119.08/min 
[2160000], rate=30195.71/min 
[2170000], rate=30272.03/min 
[2180000], rate=30340.99/min 
[2190000], rate=30416.67/min 
[2200000], rate=30492.03/min 
[2210000], rate=30574.13/min 
[2220000], rate=30662.98/min 
[2230000], rate=30744.49/min 
[2240000], rate=30825.69/min 
[2250000], rate=30906.59/min 
[2260000], rate=30994.29/min 
[2270000], rate=31081.70/min 
[2280000], rate=31161.73/min 
[2290000], rate=31248.58/min 
[2300000], rate=31342.27/min 
[2310000], rate=31435.70/min 
[2320000], rate=31528.88/min 
[2330000], rate=31621.81/min 
[2340000], rate=31714.48/min 
[2350000], rate=31756.76/min 
[2360000], rate=31763.12/min 
[2370000], rate=31776.54/min 
[2380000], rate=31782.77/min 
[2390000], rate=31796.01/min 
[2400000], rate=31809.15/min 
[2410000], rate=31836.20/min 
[2420000], rate=31877.06/min 
[2430000], rate=31910.70/min 
[2440000], rate=31937.17/min 
[2450000], rate=31970.42/min 
[2460000], rate=32003.47/min 
[2470000], rate=32036.32/min 
[2480000], rate=32075.88/min 
[2490000], rate=32122.12/min 
[2500000], rate=32168.13/min 
[2510000], rate=32213.90/min 
[2520000], rate=32259.44/min 
[2530000], rate=32263.55/min 
[2540000], rate=32274.46/min 
[2550000], rate=32312.57/min 
[2560000], rate=32350.46/min 
[2570000], rate=32394.96/min 
[2580000], rate=32446.03/min 
[2590000], rate=32496.86/min 
[2600000], rate=32540.68/min 
[2610000], rate=32591.05/min 
[2620000], rate=32647.98/min 
[2630000], rate=32704.66/min 
[2640000], rate=32754.34/min 
[2650000], rate=32810.57/min 
[2660000], rate=32859.79/min 
[2670000], rate=32915.55/min 
[2680000], rate=32971.09/min 
[2690000], rate=33033.16/min 
[2700000], rate=33088.24/min 
[2710000], rate=33143.09/min 
[2720000], rate=33197.72/min 
[2730000], rate=33258.88/min 
[2740000], rate=33319.82/min 
[2750000], rate=33380.54/min 
[2760000], rate=33447.79/min 
[2770000], rate=33514.82/min 
[2780000], rate=33588.40/min 
[2790000], rate=33655.01/min 
[2800000], rate=33728.17/min 
[2810000], rate=33807.90/min 
[2820000], rate=33880.66/min 
[2830000], rate=33953.21/min 
[2840000], rate=34032.35/min 
[2850000], rate=34111.31/min 
[2860000], rate=34190.08/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 18000000.00 reads per min processed...  
 8000000.00 reads per min processed...  
 7500000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5333333.33 reads per min processed...  
 5400000.00 reads per min processed...  
 5454545.45 reads per min processed...  
 5076923.08 reads per min processed...  
 5142857.14 reads per min processed...  
 4875000.00 reads per min processed...  
 4941176.47 reads per min processed...  
 5000000.00 reads per min processed...  
 5052631.58 reads per min processed...  
 4857142.86 reads per min processed...  
 4909090.91 reads per min processed...  
 4750000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 4846153.85 reads per min processed...  
 4714285.71 reads per min processed...  
 4758620.69 reads per min processed...  
 4800000.00 reads per min processed...  
 4838709.68 reads per min processed...  
 4727272.73 reads per min processed...  
 4764705.88 reads per min processed...  
 4666666.67 reads per min processed...  
 4702702.70 reads per min processed...  
 4615384.62 reads per min processed...  
 4650000.00 reads per min processed...  
 4571428.57 reads per min processed...  
 4500000.00 reads per min processed...  
 4533333.33 reads per min processed...  
 4468085.11 reads per min processed...  
 4500000.00 reads per min processed...  
 4530612.24 reads per min processed...  
 4470588.24 reads per min processed...  
 4500000.00 reads per min processed...  
 4444444.44 reads per min processed...  
 4472727.27 reads per min processed...  
 4500000.00 reads per min processed...  
 4526315.79 reads per min processed...  
 4551724.14 reads per min processed...  
 4500000.00 reads per min processed...  
 4524590.16 reads per min processed...  
 4548387.10 reads per min processed...  
 4500000.00 reads per min processed...  
 4523076.92 reads per min processed...  
 4545454.55 reads per min processed...  
 4500000.00 reads per min processed...  
 4521739.13 reads per min processed...  
 4542857.14 reads per min processed...  
 4500000.00 reads per min processed...  
 4520547.95 reads per min processed...  
 4540540.54 reads per min processed...  
 4560000.00 reads per min processed...  
 4578947.37 reads per min processed...  
 4597402.60 reads per min processed...  
 4615384.62 reads per min processed...  
 4692307.69 reads per min processed...  
 4708860.76 reads per min processed...  
 4725000.00 reads per min processed...  
 4682926.83 reads per min processed...  
 4698795.18 reads per min processed...  
 4714285.71 reads per min processed...  
 4674418.60 reads per min processed...  
 4689655.17 reads per min processed...  
 4704545.45 reads per min processed...  
 4719101.12 reads per min processed...  
 4733333.33 reads per min processed...  
 4695652.17 reads per min processed...  
 4709677.42 reads per min processed...  
 4723404.26 reads per min processed...  
 4736842.11 reads per min processed...  
 4701030.93 reads per min processed...  
 4714285.71 reads per min processed...  
 4680000.00 reads per min processed...  
 4693069.31 reads per min processed...  
 4705882.35 reads per min processed...  
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 4685714.29 reads per min processed...  
 4698113.21 reads per min processed...  
 4710280.37 reads per min processed...  
 4678899.08 reads per min processed...  
 4690909.09 reads per min processed...  
 4702702.70 reads per min processed...  
 4672566.37 reads per min processed...  
 4684210.53 reads per min processed...  
 4695652.17 reads per min processed...  
 4706896.55 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.MUZ8PAPt3X/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -778829.162207
EM: Round [1] log likelihood: -778561.853200
EM: Round [2] log likelihood: -778460.821550
EM: Round [3] log likelihood: -778412.204275
EM: Round [4] log likelihood: -778386.127387
EM: Round [5] log likelihood: -778371.289253
EM: Round [6] log likelihood: -778362.452555
EM: Round [7] log likelihood: -778356.957222
EM: Round [8] log likelihood: -778353.391834
EM: Round [9] log likelihood: -778350.983480
EM: Round [10] log likelihood: -778349.295394
EM: Round [11] log likelihood: -778348.072432
EM: Round [12] log likelihood: -778347.160386
EM: Round [13] log likelihood: -778346.462864
EM: Round [14] log likelihood: -778345.917650
EM: Round [15] log likelihood: -778345.483365
EM: Round [16] log likelihood: -778345.131729
EM: Round [17] log likelihood: -778344.842926
EM: Round [18] log likelihood: -778344.602761
EM: Round [19] log likelihood: -778344.400860
EM: Round [20] log likelihood: -778344.229499
EM: Round [21] log likelihood: -778344.082834
EM: Round [22] log likelihood: -778343.956375
EM: Round [23] log likelihood: -778343.846623
EM: Round [24] log likelihood: -778343.750817
EM: Round [25] log likelihood: -778343.666753
EM: Round [26] log likelihood: -778343.592648
EM: Round [27] log likelihood: -778343.527051
EM: Round [28] log likelihood: -778343.468767
EM: Round [29] log likelihood: -778343.416801
EM: Round [30] log likelihood: -778343.370323
EM: Round [31] log likelihood: -778343.328634
EM: Round [32] log likelihood: -778343.291139
EM: Round [33] log likelihood: -778343.257332
EM: Round [34] log likelihood: -778343.226780
EM: Round [35] log likelihood: -778343.199107
EM: Round [36] log likelihood: -778343.173990
EM: Round [37] log likelihood: -778343.151149
EM: Round [38] log likelihood: -778343.130337
EM: Round [39] log likelihood: -778343.111339
EM: Round [40] log likelihood: -778343.093968
EM: Round [41] log likelihood: -778343.078058
EM: Round [42] log likelihood: -778343.063462
EM: Round [43] log likelihood: -778343.050051
EM: Round [44] log likelihood: -778343.037710
EM: Round [45] log likelihood: -778343.026337
EM: Round [46] log likelihood: -778343.015841
EM: Round [47] log likelihood: -778343.006141
EM: Round [48] log likelihood: -778342.997165
EM: Round [49] log likelihood: -778342.988848
EM: Round [50] log likelihood: -778342.981131
EM: Round [51] log likelihood: -778342.973963
EM: Round [52] log likelihood: -778342.967296
EM: Round [53] log likelihood: -778342.961087
EM: Round [54] log likelihood: -778342.955300
EM: Round [55] log likelihood: -778342.949899
EM: Round [56] log likelihood: -778342.944853
EM: Round [57] log likelihood: -778342.940133
EM: Round [58] log likelihood: -778342.935715
EM: Round [59] log likelihood: -778342.931574
EM: Round [60] log likelihood: -778342.927689
EM: Round [61] log likelihood: -778342.924042
EM: Round [62] log likelihood: -778342.920614
EM: Round [63] log likelihood: -778342.917389
EM: Round [64] log likelihood: -778342.914353
EM: Round [65] log likelihood: -778342.911492
EM: Round [66] log likelihood: -778342.908794
EM: Round [67] log likelihood: -778342.906248
EM: Round [68] log likelihood: -778342.903843
EM: Round [69] log likelihood: -778342.901570
EM: Round [70] log likelihood: -778342.899420
EM: Round [71] log likelihood: -778342.897384
EM: Round [72] log likelihood: -778342.895456
EM: Round [73] log likelihood: -778342.893629
EM: Round [74] log likelihood: -778342.891896
EM: Round [75] log likelihood: -778342.890252
EM: Round [76] log likelihood: -778342.888690
EM: Round [77] log likelihood: -778342.887207
EM: Round [78] log likelihood: -778342.885797
EM: Round [79] log likelihood: -778342.884456
EM: Round [80] log likelihood: -778342.883179
EM: Round [81] log likelihood: -778342.881964
EM: Round [82] log likelihood: -778342.880807
EM: Round [83] log likelihood: -778342.879705
EM: Round [84] log likelihood: -778342.878653
EM: Round [85] log likelihood: -778342.877651
EM: Round [86] log likelihood: -778342.876694
EM: Round [87] log likelihood: -778342.875781
EM: Round [88] log likelihood: -778342.874909
EM: Round [89] log likelihood: -778342.874077
EM: Round [90] log likelihood: -778342.873281
EM: Round [91] log likelihood: -778342.872520
EM: Round [92] log likelihood: -778342.871793
EM: Round [93] log likelihood: -778342.871098
EM: Round [94] log likelihood: -778342.870432
EM: Round [95] log likelihood: -778342.869795
EM: Round [96] log likelihood: -778342.869186
EM: Round [97] log likelihood: -778342.868602
EM: Round [98] log likelihood: -778342.868043
EM: Round [99] log likelihood: -778342.867507
EM: Round [100] log likelihood: -778342.866994
EM: Round [101] log likelihood: -778342.866502
EM: Round [102] log likelihood: -778342.866030
EM: Round [103] log likelihood: -778342.865578
EM: Round [104] log likelihood: -778342.865144
EM: Round [105] log likelihood: -778342.864728
EM: Round [106] log likelihood: -778342.864329
EM: Round [107] log likelihood: -778342.863946
EM: Round [108] log likelihood: -778342.863578
EM: Round [109] log likelihood: -778342.863225
EM: Round [110] log likelihood: -778342.862886
EM: Round [111] log likelihood: -778342.862561
EM: Round [112] log likelihood: -778342.862248
EM: Round [113] log likelihood: -778342.861948
EM: Round [114] log likelihood: -778342.861659
EM: Round [115] log likelihood: -778342.861382
EM: Round [116] log likelihood: -778342.861115
EM: Round [117] log likelihood: -778342.860859
EM: Round [118] log likelihood: -778342.860613
EM: Round [119] log likelihood: -778342.860376
EM: Round [120] log likelihood: -778342.860149
EM: Round [121] log likelihood: -778342.859930
EM: Round [122] log likelihood: -778342.859720
EM: Round [123] log likelihood: -778342.859517
EM: Round [124] log likelihood: -778342.859322
EM: Round [125] log likelihood: -778342.859135
EM: Round [126] log likelihood: -778342.858955
EM: Round [127] log likelihood: -778342.858781
EM: Round [128] log likelihood: -778342.858615
EM: Round [129] log likelihood: -778342.858454
EM: Round [130] log likelihood: -778342.858299
EM: Round [131] log likelihood: -778342.858151
EM: Round [132] log likelihood: -778342.858007
EM: Round [133] log likelihood: -778342.857870
EM: Round [134] log likelihood: -778342.857737
EM: Round [135] log likelihood: -778342.857609
EM: Round [136] log likelihood: -778342.857486
EM: Round [137] log likelihood: -778342.857367
EM: Round [138] log likelihood: -778342.857253
EM: Round [139] log likelihood: -778342.857143
EM: Round [140] log likelihood: -778342.857037
EM: Round [141] log likelihood: -778342.856935
EM: Round [142] log likelihood: -778342.856837
EM: Stopping iterations at round 142 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -777793.705550
EM: Round [1] log likelihood: -777573.465135
EM: Round [2] log likelihood: -777492.595992
EM: Round [3] log likelihood: -777454.878653
EM: Round [4] log likelihood: -777435.250364
EM: Round [5] log likelihood: -777424.388842
EM: Round [6] log likelihood: -777418.092446
EM: Round [7] log likelihood: -777414.283124
EM: Round [8] log likelihood: -777411.880981
EM: Round [9] log likelihood: -777410.304483
EM: Round [10] log likelihood: -777409.230131
EM: Round [11] log likelihood: -777408.472088
EM: Round [12] log likelihood: -777407.920108
EM: Round [13] log likelihood: -777407.506688
EM: Round [14] log likelihood: -777407.189208
EM: Round [15] log likelihood: -777406.939965
EM: Round [16] log likelihood: -777406.740457
EM: Round [17] log likelihood: -777406.578012
EM: Round [18] log likelihood: -777406.443750
EM: Round [19] log likelihood: -777406.331312
EM: Round [20] log likelihood: -777406.236061
EM: Round [21] log likelihood: -777406.154548
EM: Round [22] log likelihood: -777406.084169
EM: Round [23] log likelihood: -777406.022925
EM: Round [24] log likelihood: -777405.969262
EM: Round [25] log likelihood: -777405.921951
EM: Round [26] log likelihood: -777405.880013
EM: Round [27] log likelihood: -777405.842654
EM: Round [28] log likelihood: -777405.809229
EM: Round [29] log likelihood: -777405.779203
EM: Round [30] log likelihood: -777405.752133
EM: Round [31] log likelihood: -777405.727646
EM: Round [32] log likelihood: -777405.705428
EM: Round [33] log likelihood: -777405.685212
EM: Round [34] log likelihood: -777405.666768
EM: Round [35] log likelihood: -777405.649900
EM: Round [36] log likelihood: -777405.634438
EM: Round [37] log likelihood: -777405.620233
EM: Round [38] log likelihood: -777405.607156
EM: Round [39] log likelihood: -777405.595094
EM: Round [40] log likelihood: -777405.583949
EM: Round [41] log likelihood: -777405.573631
EM: Round [42] log likelihood: -777405.564065
EM: Round [43] log likelihood: -777405.555181
EM: Round [44] log likelihood: -777405.546918
EM: Round [45] log likelihood: -777405.539221
EM: Round [46] log likelihood: -777405.532042
EM: Round [47] log likelihood: -777405.525337
EM: Round [48] log likelihood: -777405.519067
EM: Round [49] log likelihood: -777405.513196
EM: Round [50] log likelihood: -777405.507694
EM: Round [51] log likelihood: -777405.502530
EM: Round [52] log likelihood: -777405.497679
EM: Round [53] log likelihood: -777405.493117
EM: Round [54] log likelihood: -777405.488823
EM: Round [55] log likelihood: -777405.484777
EM: Round [56] log likelihood: -777405.480962
EM: Round [57] log likelihood: -777405.477362
EM: Round [58] log likelihood: -777405.473960
EM: Round [59] log likelihood: -777405.470745
EM: Round [60] log likelihood: -777405.467703
EM: Round [61] log likelihood: -777405.464823
EM: Round [62] log likelihood: -777405.462095
EM: Round [63] log likelihood: -777405.459508
EM: Round [64] log likelihood: -777405.457054
EM: Round [65] log likelihood: -777405.454725
EM: Round [66] log likelihood: -777405.452512
EM: Round [67] log likelihood: -777405.450410
EM: Round [68] log likelihood: -777405.448411
EM: Round [69] log likelihood: -777405.446509
EM: Round [70] log likelihood: -777405.444698
EM: Round [71] log likelihood: -777405.442975
EM: Round [72] log likelihood: -777405.441332
EM: Round [73] log likelihood: -777405.439767
EM: Round [74] log likelihood: -777405.438274
EM: Round [75] log likelihood: -777405.436850
EM: Round [76] log likelihood: -777405.435491
EM: Round [77] log likelihood: -777405.434194
EM: Round [78] log likelihood: -777405.432955
EM: Round [79] log likelihood: -777405.431771
EM: Round [80] log likelihood: -777405.430640
EM: Round [81] log likelihood: -777405.429559
EM: Round [82] log likelihood: -777405.428525
EM: Round [83] log likelihood: -777405.427536
EM: Round [84] log likelihood: -777405.426589
EM: Round [85] log likelihood: -777405.425683
EM: Round [86] log likelihood: -777405.424816
EM: Round [87] log likelihood: -777405.423986
EM: Round [88] log likelihood: -777405.423191
EM: Round [89] log likelihood: -777405.422429
EM: Round [90] log likelihood: -777405.421698
EM: Round [91] log likelihood: -777405.420999
EM: Round [92] log likelihood: -777405.420328
EM: Round [93] log likelihood: -777405.419684
EM: Round [94] log likelihood: -777405.419067
EM: Round [95] log likelihood: -777405.418476
EM: Round [96] log likelihood: -777405.417908
EM: Round [97] log likelihood: -777405.417363
EM: Round [98] log likelihood: -777405.416840
EM: Round [99] log likelihood: -777405.416338
EM: Round [100] log likelihood: -777405.415856
EM: Round [101] log likelihood: -777405.415393
EM: Round [102] log likelihood: -777405.414949
EM: Round [103] log likelihood: -777405.414522
EM: Round [104] log likelihood: -777405.414112
EM: Round [105] log likelihood: -777405.413718
EM: Round [106] log likelihood: -777405.413340
EM: Round [107] log likelihood: -777405.412976
EM: Round [108] log likelihood: -777405.412626
EM: Round [109] log likelihood: -777405.412290
EM: Round [110] log likelihood: -777405.411967
EM: Round [111] log likelihood: -777405.411656
EM: Round [112] log likelihood: -777405.411358
EM: Round [113] log likelihood: -777405.411070
EM: Round [114] log likelihood: -777405.410794
EM: Round [115] log likelihood: -777405.410528
EM: Round [116] log likelihood: -777405.410273
EM: Round [117] log likelihood: -777405.410027
EM: Round [118] log likelihood: -777405.409790
EM: Round [119] log likelihood: -777405.409562
EM: Round [120] log likelihood: -777405.409343
EM: Round [121] log likelihood: -777405.409132
EM: Round [122] log likelihood: -777405.408929
EM: Round [123] log likelihood: -777405.408734
EM: Round [124] log likelihood: -777405.408546
EM: Round [125] log likelihood: -777405.408365
EM: Round [126] log likelihood: -777405.408191
EM: Round [127] log likelihood: -777405.408023
EM: Round [128] log likelihood: -777405.407861
EM: Round [129] log likelihood: -777405.407706
EM: Round [130] log likelihood: -777405.407556
EM: Round [131] log likelihood: -777405.407412
EM: Round [132] log likelihood: -777405.407272
EM: Round [133] log likelihood: -777405.407139
EM: Round [134] log likelihood: -777405.407010
EM: Round [135] log likelihood: -777405.406885
EM: Round [136] log likelihood: -777405.406766
EM: Round [137] log likelihood: -777405.406650
EM: Round [138] log likelihood: -777405.406539
EM: Round [139] log likelihood: -777405.406432
EM: Round [140] log likelihood: -777405.406329
EM: Round [141] log likelihood: -777405.406230
EM: Stopping iterations at round 141 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 268802929 > /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir > /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir --annotate /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir
-done, see /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1776, filtered: 13201)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.MUZ8PAPt3X/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.MUZ8PAPt3X/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
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WARNING, no entry stored in dbm for [ENSG00000274020.4]
WARNING, no entry stored in dbm for [ENSG00000215861.6]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000237667.7]
WARNING, no entry stored in dbm for [ENSG00000224559.2]
WARNING, no entry stored in dbm for [ENSG00000249378.6]
WARNING, no entry stored in dbm for [ENSG00000230426.4]
WARNING, no entry stored in dbm for [ENSG00000246100.4]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000237945.7]
WARNING, no entry stored in dbm for [ENSG00000197503.4]
WARNING, no entry stored in dbm for [ENSG00000153363.13]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000265933.5]
WARNING, no entry stored in dbm for [ENSG00000227893.1]
WARNING, no entry stored in dbm for [ENSG00000270071.3]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000269072.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000253200.1]
WARNING, no entry stored in dbm for [ENSG00000187686.4]
WARNING, no entry stored in dbm for [ENSG00000228666.1]
WARNING, no entry stored in dbm for [ENSG00000179978.11]
WARNING, no entry stored in dbm for [ENSG00000229127.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000234336.7]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000264823.3]
WARNING, no entry stored in dbm for [ENSG00000271646.1]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000273658.1]
WARNING, no entry stored in dbm for [ENSG00000284676.1]
WARNING, no entry stored in dbm for [ENSG00000272115.1]
WARNING, no entry stored in dbm for [ENSG00000165874.13]
WARNING, no entry stored in dbm for [ENSG00000205940.8]
WARNING, no entry stored in dbm for [ENSG00000231434.1]
WARNING, no entry stored in dbm for [ENSG00000231434.1]
WARNING, no entry stored in dbm for [ENSG00000231382.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000220305.1]
WARNING, no entry stored in dbm for [ENSG00000230330.1]
WARNING, no entry stored in dbm for [ENSG00000255033.1]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000248508.8]
WARNING, no entry stored in dbm for [ENSG00000223383.1]
WARNING, no entry stored in dbm for [ENSG00000218690.2]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000274471.2]
WARNING, no entry stored in dbm for [ENSG00000178243.4]
WARNING, no entry stored in dbm for [ENSG00000255750.6]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000256424.2]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000260440.3]
WARNING, no entry stored in dbm for [ENSG00000260971.4]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000235954.7]
WARNING, no entry stored in dbm for [ENSG00000269959.1]
WARNING, no entry stored in dbm for [ENSG00000271923.1]
WARNING, no entry stored in dbm for [ENSG00000237264.4]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000224599.1]
WARNING, no entry stored in dbm for [ENSG00000287355.1]
WARNING, no entry stored in dbm for [ENSG00000232391.1]
WARNING, no entry stored in dbm for [ENSG00000249203.2]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000280241.4]
WARNING, no entry stored in dbm for [ENSG00000249353.2]
WARNING, no entry stored in dbm for [ENSG00000181355.21]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000234048.1]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000271119.1]
WARNING, no entry stored in dbm for [ENSG00000234588.1]
WARNING, no entry stored in dbm for [ENSG00000207089.1]
WARNING, no entry stored in dbm for [ENSG00000207518.1]
WARNING, no entry stored in dbm for [ENSG00000202229.1]
WARNING, no entry stored in dbm for [ENSG00000228293.1]
WARNING, no entry stored in dbm for [ENSG00000188828.13]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000223797.6]
WARNING, no entry stored in dbm for [ENSG00000225807.2]
WARNING, no entry stored in dbm for [ENSG00000228193.1]
WARNING, no entry stored in dbm for [ENSG00000237064.1]
WARNING, no entry stored in dbm for [ENSG00000250346.1]
WARNING, no entry stored in dbm for [ENSG00000240138.1]
WARNING, no entry stored in dbm for [ENSG00000218792.2]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000225728.2]
WARNING, no entry stored in dbm for [ENSG00000236349.1]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000267555.1]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000284719.1]
WARNING, no entry stored in dbm for [ENSG00000279494.1]
WARNING, no entry stored in dbm for [ENSG00000240048.1]
WARNING, no entry stored in dbm for [ENSG00000237094.12]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000170089.15]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000237206.1]
WARNING, no entry stored in dbm for [ENSG00000223704.2]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000285979.1]
WARNING, no entry stored in dbm for [ENSG00000235824.5]
WARNING, no entry stored in dbm for [ENSG00000224709.2]
WARNING, no entry stored in dbm for [ENSG00000258118.1]
WARNING, no entry stored in dbm for [ENSG00000244932.2]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000214988.4]
WARNING, no entry stored in dbm for [ENSG00000285108.1]
WARNING, no entry stored in dbm for [ENSG00000223908.5]
WARNING, no entry stored in dbm for [ENSG00000228146.8]
WARNING, no entry stored in dbm for [ENSG00000280248.1]
WARNING, no entry stored in dbm for [ENSG00000266733.7]
WARNING, no entry stored in dbm for [ENSG00000225670.4]
WARNING, no entry stored in dbm for [ENSG00000284196.3]
WARNING, no entry stored in dbm for [ENSG00000228697.4]
WARNING, no entry stored in dbm for [ENSG00000215353.2]
WARNING, no entry stored in dbm for [ENSG00000284627.1]
WARNING, no entry stored in dbm for [ENSG00000268864.4]
WARNING, no entry stored in dbm for [ENSG00000231140.3]
WARNING, no entry stored in dbm for [ENSG00000188825.14]
WARNING, no entry stored in dbm for [ENSG00000248935.1]
WARNING, no entry stored in dbm for [ENSG00000280594.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000255856.2]
WARNING, no entry stored in dbm for [ENSG00000249690.1]
WARNING, no entry stored in dbm for [ENSG00000231349.2]
WARNING, no entry stored in dbm for [ENSG00000258877.2]
WARNING, no entry stored in dbm for [ENSG00000283393.1]
WARNING, no entry stored in dbm for [ENSG00000125462.19]
WARNING, no entry stored in dbm for [ENSG00000197595.4]
WARNING, no entry stored in dbm for [ENSG00000215325.4]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000254984.1]
WARNING, no entry stored in dbm for [ENSG00000206187.4]
WARNING, no entry stored in dbm for [ENSG00000263731.1]
WARNING, no entry stored in dbm for [ENSG00000214198.8]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000239413.1]
WARNING, no entry stored in dbm for [ENSG00000239413.1]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000284639.1]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000256739.1]
WARNING, no entry stored in dbm for [ENSG00000255449.1]
WARNING, no entry stored in dbm for [ENSG00000255449.1]
WARNING, no entry stored in dbm for [ENSG00000279841.1]
WARNING, no entry stored in dbm for [ENSG00000267108.1]
WARNING, no entry stored in dbm for [ENSG00000267422.1]
WARNING, no entry stored in dbm for [ENSG00000278050.1]
WARNING, no entry stored in dbm for [ENSG00000256035.1]
WARNING, no entry stored in dbm for [ENSG00000230551.4]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000224431.1]
WARNING, no entry stored in dbm for [ENSG00000235731.3]
WARNING, no entry stored in dbm for [ENSG00000283546.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000288093.1]
WARNING, no entry stored in dbm for [ENSG00000227885.3]
WARNING, no entry stored in dbm for [ENSG00000216802.1]
WARNING, no entry stored in dbm for [ENSG00000256282.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000234117.2]
WARNING, no entry stored in dbm for [ENSG00000287277.1]
WARNING, no entry stored in dbm for [ENSG00000259048.1]
WARNING, no entry stored in dbm for [ENSG00000226465.3]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000286313.1]
WARNING, no entry stored in dbm for [ENSG00000286881.1]
WARNING, no entry stored in dbm for [ENSG00000161132.6]
WARNING, no entry stored in dbm for [ENSG00000248503.2]
WARNING, no entry stored in dbm for [ENSG00000203620.2]
WARNING, no entry stored in dbm for [ENSG00000231616.9]
WARNING, no entry stored in dbm for [ENSG00000230537.2]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000220472.1]
WARNING, no entry stored in dbm for [ENSG00000231307.1]
WARNING, no entry stored in dbm for [ENSG00000283384.1]
WARNING, no entry stored in dbm for [ENSG00000225472.2]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000258534.1]
WARNING, no entry stored in dbm for [ENSG00000287395.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000260532.1]
WARNING, no entry stored in dbm for [ENSG00000224794.2]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000222958.1]
WARNING, no entry stored in dbm for [ENSG00000222958.1]
WARNING, no entry stored in dbm for [ENSG00000213107.2]
WARNING, no entry stored in dbm for [ENSG00000220472.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000225200.2]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000225200.2]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000237017.1]
WARNING, no entry stored in dbm for [ENSG00000283566.2]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000286710.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000224458.3]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000287567.1]
WARNING, no entry stored in dbm for [ENSG00000286618.1]
WARNING, no entry stored in dbm for [ENSG00000251158.1]
WARNING, no entry stored in dbm for [ENSG00000179978.11]
WARNING, no entry stored in dbm for [ENSG00000288075.1]
WARNING, no entry stored in dbm for [ENSG00000180764.13]
WARNING, no entry stored in dbm for [ENSG00000232101.1]
WARNING, no entry stored in dbm for [ENSG00000254328.1]
WARNING, no entry stored in dbm for [ENSG00000280211.1]
WARNING, no entry stored in dbm for [ENSG00000260082.1]
WARNING, no entry stored in dbm for [ENSG00000267905.5]
WARNING, no entry stored in dbm for [ENSG00000260037.5]
WARNING, no entry stored in dbm for [ENSG00000259696.2]
WARNING, no entry stored in dbm for [ENSG00000226489.1]
WARNING, no entry stored in dbm for [ENSG00000242123.1]
WARNING, no entry stored in dbm for [ENSG00000251416.1]
WARNING, no entry stored in dbm for [ENSG00000241462.1]
WARNING, no entry stored in dbm for [ENSG00000227615.1]
WARNING, no entry stored in dbm for [ENSG00000259635.1]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000287676.1]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000251643.1]
WARNING, no entry stored in dbm for [ENSG00000285155.1]
WARNING, no entry stored in dbm for [ENSG00000262136.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000286410.1]
WARNING, no entry stored in dbm for [ENSG00000283415.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000257294.2]
WARNING, no entry stored in dbm for [ENSG00000285679.2]
WARNING, no entry stored in dbm for [ENSG00000261570.2]
WARNING, no entry stored in dbm for [ENSG00000284636.1]
WARNING, no entry stored in dbm for [ENSG00000234837.1]
WARNING, no entry stored in dbm for [ENSG00000227769.7]
WARNING, no entry stored in dbm for [ENSG00000287365.1]
WARNING, no entry stored in dbm for [ENSG00000287710.1]
WARNING, no entry stored in dbm for [ENSG00000280331.1]
WARNING, no entry stored in dbm for [ENSG00000240752.1]
WARNING, no entry stored in dbm for [ENSG00000227615.1]
WARNING, no entry stored in dbm for [ENSG00000260035.1]
WARNING, no entry stored in dbm for [ENSG00000259932.1]
WARNING, no entry stored in dbm for [ENSG00000259433.2]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000235583.2]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000286909.1]
WARNING, no entry stored in dbm for [ENSG00000261924.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000258488.2]
WARNING, no entry stored in dbm for [ENSG00000253636.1]
WARNING, no entry stored in dbm for [ENSG00000248538.8]
WARNING, no entry stored in dbm for [ENSG00000279347.1]
WARNING, no entry stored in dbm for [ENSG00000230551.4]
WARNING, no entry stored in dbm for [ENSG00000268957.1]
WARNING, no entry stored in dbm for [ENSG00000249309.1]
WARNING, no entry stored in dbm for [ENSG00000266573.6]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000184319.16]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000280063.1]
WARNING, no entry stored in dbm for [ENSG00000287299.1]
WARNING, no entry stored in dbm for [ENSG00000228007.1]
WARNING, no entry stored in dbm for [ENSG00000224683.1]
WARNING, no entry stored in dbm for [ENSG00000269653.1]
WARNING, no entry stored in dbm for [ENSG00000270248.1]
WARNING, no entry stored in dbm for [ENSG00000270248.1]
WARNING, no entry stored in dbm for [ENSG00000286404.1]
WARNING, no entry stored in dbm for [ENSG00000271141.1]
WARNING, no entry stored in dbm for [ENSG00000244560.7]
WARNING, no entry stored in dbm for [ENSG00000226180.3]
WARNING, no entry stored in dbm for [ENSG00000262732.1]
WARNING, no entry stored in dbm for [ENSG00000286247.1]
WARNING, no entry stored in dbm for [ENSG00000216895.9]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000262211.1]
WARNING, no entry stored in dbm for [ENSG00000279529.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000270442.1]
WARNING, no entry stored in dbm for [ENSG00000250928.1]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000244510.2]
WARNING, no entry stored in dbm for [ENSG00000233565.1]
WARNING, no entry stored in dbm for [ENSG00000241112.1]
WARNING, no entry stored in dbm for [ENSG00000255595.5]
WARNING, no entry stored in dbm for [ENSG00000261804.2]
WARNING, no entry stored in dbm for [ENSG00000279865.1]
WARNING, no entry stored in dbm for [ENSG00000196205.8]
WARNING, no entry stored in dbm for [ENSG00000268460.2]
WARNING, no entry stored in dbm for [ENSG00000226824.7]
WARNING, no entry stored in dbm for [ENSG00000226040.3]
WARNING, no entry stored in dbm for [ENSG00000226329.2]
WARNING, no entry stored in dbm for [ENSG00000260107.1]
WARNING, no entry stored in dbm for [ENSG00000280739.3]
WARNING, no entry stored in dbm for [ENSG00000248493.1]
WARNING, no entry stored in dbm for [ENSG00000273388.1]
WARNING, no entry stored in dbm for [ENSG00000183308.6]
WARNING, no entry stored in dbm for [ENSG00000221953.5]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000284605.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000255367.3]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000285704.1]
WARNING, no entry stored in dbm for [ENSG00000240311.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000230479.1]
WARNING, no entry stored in dbm for [ENSG00000215458.8]
WARNING, no entry stored in dbm for [ENSG00000245105.4]


	* STAR-Fusion complete.  See output: /tmp/nxf.MUZ8PAPt3X/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)