-ctat genome lib [/tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.NBEjAmFgsZ/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary
-sample contains 218385311 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir  -J /tmp/nxf.NBEjAmFgsZ/BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2.Chimeric.out.junction  -O /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.NBEjAmFgsZ/BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2320000], rate=60077.69/min -building interval tree based on /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2300000], rate=59227.47/min 
[2310000], rate=58928.57/min 
[2320000], rate=58610.53/min -building interval tree based on /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=120000.00/min 
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[2300000], rate=53076.92/min 
[2310000], rate=52739.73/min -building interval tree based on /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=150000.00/min 
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[2300000], rate=44703.60/min 
[2310000], rate=44796.38/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 3750000.00 reads per min processed...  
 3272727.27 reads per min processed...  
 3000000.00 reads per min processed...  
 3200000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3157894.74 reads per min processed...  
 3142857.14 reads per min processed...  
 3130434.78 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 2903225.81 reads per min processed...  
 2909090.91 reads per min processed...  
 2833333.33 reads per min processed...  
 2842105.26 reads per min processed...  
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 2800000.00 reads per min processed...  
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 2600000.00 reads per min processed...  
 2605263.16 reads per min processed...  
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 2582278.48 reads per min processed...  
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 2602409.64 reads per min processed...  
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 2627218.93 reads per min processed...  
 2631578.95 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.NBEjAmFgsZ/BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -416226.408487
EM: Round [1] log likelihood: -416065.180897
EM: Round [2] log likelihood: -416001.948988
EM: Round [3] log likelihood: -415971.752118
EM: Round [4] log likelihood: -415955.889310
EM: Round [5] log likelihood: -415947.017619
EM: Round [6] log likelihood: -415941.788611
EM: Round [7] log likelihood: -415938.547036
EM: Round [8] log likelihood: -415936.435291
EM: Round [9] log likelihood: -415934.992960
EM: Round [10] log likelihood: -415933.964245
EM: Round [11] log likelihood: -415933.201892
EM: Round [12] log likelihood: -415932.617968
EM: Round [13] log likelihood: -415932.158001
EM: Round [14] log likelihood: -415931.787013
EM: Round [15] log likelihood: -415931.481770
EM: Round [16] log likelihood: -415931.226350
EM: Round [17] log likelihood: -415931.009532
EM: Round [18] log likelihood: -415930.823208
EM: Round [19] log likelihood: -415930.661392
EM: Round [20] log likelihood: -415930.519573
EM: Round [21] log likelihood: -415930.394291
EM: Round [22] log likelihood: -415930.282852
EM: Round [23] log likelihood: -415930.183127
EM: Round [24] log likelihood: -415930.093408
EM: Round [25] log likelihood: -415930.012312
EM: Round [26] log likelihood: -415929.938702
EM: Round [27] log likelihood: -415929.871636
EM: Round [28] log likelihood: -415929.810326
EM: Round [29] log likelihood: -415929.754108
EM: Round [30] log likelihood: -415929.702414
EM: Round [31] log likelihood: -415929.654759
EM: Round [32] log likelihood: -415929.610725
EM: Round [33] log likelihood: -415929.569948
EM: Round [34] log likelihood: -415929.532111
EM: Round [35] log likelihood: -415929.496937
EM: Round [36] log likelihood: -415929.464182
EM: Round [37] log likelihood: -415929.433627
EM: Round [38] log likelihood: -415929.405083
EM: Round [39] log likelihood: -415929.378377
EM: Round [40] log likelihood: -415929.353358
EM: Round [41] log likelihood: -415929.329888
EM: Round [42] log likelihood: -415929.307844
EM: Round [43] log likelihood: -415929.287116
EM: Round [44] log likelihood: -415929.267604
EM: Round [45] log likelihood: -415929.249217
EM: Round [46] log likelihood: -415929.231874
EM: Round [47] log likelihood: -415929.215499
EM: Round [48] log likelihood: -415929.200026
EM: Round [49] log likelihood: -415929.185391
EM: Round [50] log likelihood: -415929.171538
EM: Round [51] log likelihood: -415929.158416
EM: Round [52] log likelihood: -415929.145977
EM: Round [53] log likelihood: -415929.134176
EM: Round [54] log likelihood: -415929.122975
EM: Round [55] log likelihood: -415929.112335
EM: Round [56] log likelihood: -415929.102223
EM: Round [57] log likelihood: -415929.092606
EM: Round [58] log likelihood: -415929.083456
EM: Round [59] log likelihood: -415929.074746
EM: Round [60] log likelihood: -415929.066449
EM: Round [61] log likelihood: -415929.058544
EM: Round [62] log likelihood: -415929.051007
EM: Round [63] log likelihood: -415929.043819
EM: Round [64] log likelihood: -415929.036961
EM: Round [65] log likelihood: -415929.030415
EM: Round [66] log likelihood: -415929.024164
EM: Round [67] log likelihood: -415929.018193
EM: Round [68] log likelihood: -415929.012488
EM: Round [69] log likelihood: -415929.007035
EM: Round [70] log likelihood: -415929.001821
EM: Round [71] log likelihood: -415928.996834
EM: Round [72] log likelihood: -415928.992064
EM: Round [73] log likelihood: -415928.987498
EM: Round [74] log likelihood: -415928.983128
EM: Round [75] log likelihood: -415928.978945
EM: Round [76] log likelihood: -415928.974938
EM: Round [77] log likelihood: -415928.971100
EM: Round [78] log likelihood: -415928.967423
EM: Round [79] log likelihood: -415928.963899
EM: Round [80] log likelihood: -415928.960522
EM: Round [81] log likelihood: -415928.957284
EM: Round [82] log likelihood: -415928.954179
EM: Round [83] log likelihood: -415928.951202
EM: Round [84] log likelihood: -415928.948346
EM: Round [85] log likelihood: -415928.945607
EM: Round [86] log likelihood: -415928.942978
EM: Round [87] log likelihood: -415928.940456
EM: Round [88] log likelihood: -415928.938035
EM: Round [89] log likelihood: -415928.935711
EM: Round [90] log likelihood: -415928.933480
EM: Round [91] log likelihood: -415928.931338
EM: Round [92] log likelihood: -415928.929281
EM: Round [93] log likelihood: -415928.927306
EM: Round [94] log likelihood: -415928.925409
EM: Round [95] log likelihood: -415928.923586
EM: Round [96] log likelihood: -415928.921835
EM: Round [97] log likelihood: -415928.920153
EM: Round [98] log likelihood: -415928.918537
EM: Round [99] log likelihood: -415928.916983
EM: Round [100] log likelihood: -415928.915491
EM: Round [101] log likelihood: -415928.914056
EM: Round [102] log likelihood: -415928.912677
EM: Round [103] log likelihood: -415928.911351
EM: Round [104] log likelihood: -415928.910076
EM: Round [105] log likelihood: -415928.908851
EM: Round [106] log likelihood: -415928.907672
EM: Round [107] log likelihood: -415928.906539
EM: Round [108] log likelihood: -415928.905450
EM: Round [109] log likelihood: -415928.904402
EM: Round [110] log likelihood: -415928.903394
EM: Round [111] log likelihood: -415928.902424
EM: Round [112] log likelihood: -415928.901492
EM: Round [113] log likelihood: -415928.900595
EM: Round [114] log likelihood: -415928.899732
EM: Round [115] log likelihood: -415928.898902
EM: Round [116] log likelihood: -415928.898103
EM: Round [117] log likelihood: -415928.897334
EM: Round [118] log likelihood: -415928.896595
EM: Round [119] log likelihood: -415928.895883
EM: Round [120] log likelihood: -415928.895198
EM: Round [121] log likelihood: -415928.894539
EM: Round [122] log likelihood: -415928.893905
EM: Round [123] log likelihood: -415928.893294
EM: Round [124] log likelihood: -415928.892706
EM: Round [125] log likelihood: -415928.892141
EM: Round [126] log likelihood: -415928.891596
EM: Round [127] log likelihood: -415928.891072
EM: Round [128] log likelihood: -415928.890568
EM: Round [129] log likelihood: -415928.890082
EM: Round [130] log likelihood: -415928.889615
EM: Round [131] log likelihood: -415928.889164
EM: Round [132] log likelihood: -415928.888731
EM: Round [133] log likelihood: -415928.888314
EM: Round [134] log likelihood: -415928.887912
EM: Round [135] log likelihood: -415928.887525
EM: Round [136] log likelihood: -415928.887152
EM: Round [137] log likelihood: -415928.886793
EM: Round [138] log likelihood: -415928.886448
EM: Round [139] log likelihood: -415928.886115
EM: Round [140] log likelihood: -415928.885795
EM: Round [141] log likelihood: -415928.885486
EM: Round [142] log likelihood: -415928.885189
EM: Round [143] log likelihood: -415928.884902
EM: Round [144] log likelihood: -415928.884627
EM: Round [145] log likelihood: -415928.884361
EM: Round [146] log likelihood: -415928.884105
EM: Round [147] log likelihood: -415928.883859
EM: Round [148] log likelihood: -415928.883621
EM: Round [149] log likelihood: -415928.883392
EM: Round [150] log likelihood: -415928.883172
EM: Round [151] log likelihood: -415928.882960
EM: Round [152] log likelihood: -415928.882755
EM: Round [153] log likelihood: -415928.882558
EM: Round [154] log likelihood: -415928.882368
EM: Round [155] log likelihood: -415928.882185
EM: Round [156] log likelihood: -415928.882009
EM: Round [157] log likelihood: -415928.881839
EM: Round [158] log likelihood: -415928.881676
EM: Round [159] log likelihood: -415928.881518
EM: Round [160] log likelihood: -415928.881366
EM: Round [161] log likelihood: -415928.881220
EM: Round [162] log likelihood: -415928.881079
EM: Round [163] log likelihood: -415928.880943
EM: Round [164] log likelihood: -415928.880812
EM: Round [165] log likelihood: -415928.880685
EM: Round [166] log likelihood: -415928.880564
EM: Round [167] log likelihood: -415928.880446
EM: Round [168] log likelihood: -415928.880333
EM: Round [169] log likelihood: -415928.880224
EM: Round [170] log likelihood: -415928.880119
EM: Round [171] log likelihood: -415928.880018
EM: Round [172] log likelihood: -415928.879920
EM: Stopping iterations at round 172 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -415799.034934
EM: Round [1] log likelihood: -415661.845179
EM: Round [2] log likelihood: -415609.935459
EM: Round [3] log likelihood: -415585.786973
EM: Round [4] log likelihood: -415573.361614
EM: Round [5] log likelihood: -415566.513247
EM: Round [6] log likelihood: -415562.517485
EM: Round [7] log likelihood: -415560.058604
EM: Round [8] log likelihood: -415558.465496
EM: Round [9] log likelihood: -415557.381557
EM: Round [10] log likelihood: -415556.610172
EM: Round [11] log likelihood: -415556.038911
EM: Round [12] log likelihood: -415555.601062
EM: Round [13] log likelihood: -415555.255545
EM: Round [14] log likelihood: -415554.976125
EM: Round [15] log likelihood: -415554.745461
EM: Round [16] log likelihood: -415554.551718
EM: Round [17] log likelihood: -415554.386579
EM: Round [18] log likelihood: -415554.244051
EM: Round [19] log likelihood: -415554.119713
EM: Round [20] log likelihood: -415554.010237
EM: Round [21] log likelihood: -415553.913073
EM: Round [22] log likelihood: -415553.826235
EM: Round [23] log likelihood: -415553.748149
EM: Round [24] log likelihood: -415553.677558
EM: Round [25] log likelihood: -415553.613437
EM: Round [26] log likelihood: -415553.554947
EM: Round [27] log likelihood: -415553.501392
EM: Round [28] log likelihood: -415553.452188
EM: Round [29] log likelihood: -415553.406841
EM: Round [30] log likelihood: -415553.364933
EM: Round [31] log likelihood: -415553.326103
EM: Round [32] log likelihood: -415553.290041
EM: Round [33] log likelihood: -415553.256477
EM: Round [34] log likelihood: -415553.225175
EM: Round [35] log likelihood: -415553.195930
EM: Round [36] log likelihood: -415553.168558
EM: Round [37] log likelihood: -415553.142899
EM: Round [38] log likelihood: -415553.118809
EM: Round [39] log likelihood: -415553.096162
EM: Round [40] log likelihood: -415553.074844
EM: Round [41] log likelihood: -415553.054751
EM: Round [42] log likelihood: -415553.035791
EM: Round [43] log likelihood: -415553.017883
EM: Round [44] log likelihood: -415553.000949
EM: Round [45] log likelihood: -415552.984923
EM: Round [46] log likelihood: -415552.969741
EM: Round [47] log likelihood: -415552.955348
EM: Round [48] log likelihood: -415552.941692
EM: Round [49] log likelihood: -415552.928725
EM: Round [50] log likelihood: -415552.916404
EM: Round [51] log likelihood: -415552.904689
EM: Round [52] log likelihood: -415552.893544
EM: Round [53] log likelihood: -415552.882934
EM: Round [54] log likelihood: -415552.872829
EM: Round [55] log likelihood: -415552.863199
EM: Round [56] log likelihood: -415552.854018
EM: Round [57] log likelihood: -415552.845260
EM: Round [58] log likelihood: -415552.836903
EM: Round [59] log likelihood: -415552.828924
EM: Round [60] log likelihood: -415552.821304
EM: Round [61] log likelihood: -415552.814024
EM: Round [62] log likelihood: -415552.807066
EM: Round [63] log likelihood: -415552.800414
EM: Round [64] log likelihood: -415552.794052
EM: Round [65] log likelihood: -415552.787966
EM: Round [66] log likelihood: -415552.782143
EM: Round [67] log likelihood: -415552.776569
EM: Round [68] log likelihood: -415552.771232
EM: Round [69] log likelihood: -415552.766122
EM: Round [70] log likelihood: -415552.761227
EM: Round [71] log likelihood: -415552.756537
EM: Round [72] log likelihood: -415552.752043
EM: Round [73] log likelihood: -415552.747736
EM: Round [74] log likelihood: -415552.743607
EM: Round [75] log likelihood: -415552.739648
EM: Round [76] log likelihood: -415552.735851
EM: Round [77] log likelihood: -415552.732210
EM: Round [78] log likelihood: -415552.728717
EM: Round [79] log likelihood: -415552.725366
EM: Round [80] log likelihood: -415552.722150
EM: Round [81] log likelihood: -415552.719065
EM: Round [82] log likelihood: -415552.716103
EM: Round [83] log likelihood: -415552.713260
EM: Round [84] log likelihood: -415552.710530
EM: Round [85] log likelihood: -415552.707910
EM: Round [86] log likelihood: -415552.705393
EM: Round [87] log likelihood: -415552.702976
EM: Round [88] log likelihood: -415552.700655
EM: Round [89] log likelihood: -415552.698426
EM: Round [90] log likelihood: -415552.696284
EM: Round [91] log likelihood: -415552.694226
EM: Round [92] log likelihood: -415552.692250
EM: Round [93] log likelihood: -415552.690350
EM: Round [94] log likelihood: -415552.688525
EM: Round [95] log likelihood: -415552.686770
EM: Round [96] log likelihood: -415552.685084
EM: Round [97] log likelihood: -415552.683464
EM: Round [98] log likelihood: -415552.681906
EM: Round [99] log likelihood: -415552.680408
EM: Round [100] log likelihood: -415552.678969
EM: Round [101] log likelihood: -415552.677585
EM: Round [102] log likelihood: -415552.676254
EM: Round [103] log likelihood: -415552.674974
EM: Round [104] log likelihood: -415552.673744
EM: Round [105] log likelihood: -415552.672560
EM: Round [106] log likelihood: -415552.671422
EM: Round [107] log likelihood: -415552.670328
EM: Round [108] log likelihood: -415552.669275
EM: Round [109] log likelihood: -415552.668263
EM: Round [110] log likelihood: -415552.667289
EM: Round [111] log likelihood: -415552.666352
EM: Round [112] log likelihood: -415552.665451
EM: Round [113] log likelihood: -415552.664583
EM: Round [114] log likelihood: -415552.663749
EM: Round [115] log likelihood: -415552.662947
EM: Round [116] log likelihood: -415552.662175
EM: Round [117] log likelihood: -415552.661432
EM: Round [118] log likelihood: -415552.660717
EM: Round [119] log likelihood: -415552.660029
EM: Round [120] log likelihood: -415552.659367
EM: Round [121] log likelihood: -415552.658729
EM: Round [122] log likelihood: -415552.658116
EM: Round [123] log likelihood: -415552.657526
EM: Round [124] log likelihood: -415552.656958
EM: Round [125] log likelihood: -415552.656411
EM: Round [126] log likelihood: -415552.655885
EM: Round [127] log likelihood: -415552.655379
EM: Round [128] log likelihood: -415552.654891
EM: Round [129] log likelihood: -415552.654422
EM: Round [130] log likelihood: -415552.653970
EM: Round [131] log likelihood: -415552.653535
EM: Round [132] log likelihood: -415552.653117
EM: Round [133] log likelihood: -415552.652714
EM: Round [134] log likelihood: -415552.652326
EM: Round [135] log likelihood: -415552.651952
EM: Round [136] log likelihood: -415552.651592
EM: Round [137] log likelihood: -415552.651246
EM: Round [138] log likelihood: -415552.650912
EM: Round [139] log likelihood: -415552.650591
EM: Round [140] log likelihood: -415552.650282
EM: Round [141] log likelihood: -415552.649984
EM: Round [142] log likelihood: -415552.649697
EM: Round [143] log likelihood: -415552.649421
EM: Round [144] log likelihood: -415552.649155
EM: Round [145] log likelihood: -415552.648899
EM: Round [146] log likelihood: -415552.648652
EM: Round [147] log likelihood: -415552.648415
EM: Round [148] log likelihood: -415552.648186
EM: Round [149] log likelihood: -415552.647966
EM: Round [150] log likelihood: -415552.647753
EM: Round [151] log likelihood: -415552.647549
EM: Round [152] log likelihood: -415552.647352
EM: Round [153] log likelihood: -415552.647162
EM: Round [154] log likelihood: -415552.646979
EM: Round [155] log likelihood: -415552.646803
EM: Round [156] log likelihood: -415552.646634
EM: Round [157] log likelihood: -415552.646470
EM: Round [158] log likelihood: -415552.646313
EM: Round [159] log likelihood: -415552.646161
EM: Round [160] log likelihood: -415552.646015
EM: Round [161] log likelihood: -415552.645874
EM: Round [162] log likelihood: -415552.645739
EM: Round [163] log likelihood: -415552.645608
EM: Round [164] log likelihood: -415552.645482
EM: Round [165] log likelihood: -415552.645361
EM: Round [166] log likelihood: -415552.645244
EM: Round [167] log likelihood: -415552.645131
EM: Round [168] log likelihood: -415552.645023
EM: Round [169] log likelihood: -415552.644918
EM: Round [170] log likelihood: -415552.644817
EM: Round [171] log likelihood: -415552.644720
EM: Stopping iterations at round 171 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 218385311 > /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir > /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir --annotate /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir
-done, see /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1701, filtered: 14723)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.NBEjAmFgsZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.NBEjAmFgsZ/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000269001.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000231933.7]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000204188.7]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000275131.3]
WARNING, no entry stored in dbm for [ENSG00000254539.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000231933.7]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000259098.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000256262.1]
WARNING, no entry stored in dbm for [ENSG00000229057.1]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000286586.1]
WARNING, no entry stored in dbm for [ENSG00000242326.1]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000239533.6]
WARNING, no entry stored in dbm for [ENSG00000273729.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000267376.1]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000286559.1]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000258028.3]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000235908.1]
WARNING, no entry stored in dbm for [ENSG00000279070.2]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000179978.11]
WARNING, no entry stored in dbm for [ENSG00000187600.14]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000285551.2]
WARNING, no entry stored in dbm for [ENSG00000285331.2]
WARNING, no entry stored in dbm for [ENSG00000250073.3]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000230202.1]
WARNING, no entry stored in dbm for [ENSG00000255282.6]
WARNING, no entry stored in dbm for [ENSG00000261241.7]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000225878.1]
WARNING, no entry stored in dbm for [ENSG00000261373.1]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000279416.1]
WARNING, no entry stored in dbm for [ENSG00000274328.1]
WARNING, no entry stored in dbm for [ENSG00000278182.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000237372.4]
WARNING, no entry stored in dbm for [ENSG00000250569.1]
WARNING, no entry stored in dbm for [ENSG00000225766.10]
WARNING, no entry stored in dbm for [ENSG00000248184.1]
WARNING, no entry stored in dbm for [ENSG00000213362.3]
WARNING, no entry stored in dbm for [ENSG00000230825.2]
WARNING, no entry stored in dbm for [ENSG00000264112.1]
WARNING, no entry stored in dbm for [ENSG00000184274.3]
WARNING, no entry stored in dbm for [ENSG00000250272.1]
WARNING, no entry stored in dbm for [ENSG00000166007.11]
WARNING, no entry stored in dbm for [ENSG00000239545.3]
WARNING, no entry stored in dbm for [ENSG00000219941.1]
WARNING, no entry stored in dbm for [ENSG00000230115.1]
WARNING, no entry stored in dbm for [ENSG00000274767.1]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000259343.7]
WARNING, no entry stored in dbm for [ENSG00000268034.1]
WARNING, no entry stored in dbm for [ENSG00000248394.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000263873.1]
WARNING, no entry stored in dbm for [ENSG00000228791.8]
WARNING, no entry stored in dbm for [ENSG00000231365.6]
WARNING, no entry stored in dbm for [ENSG00000226824.7]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000279243.3]
WARNING, no entry stored in dbm for [ENSG00000237139.1]
WARNING, no entry stored in dbm for [ENSG00000259577.2]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000174353.17]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000239521.9]
WARNING, no entry stored in dbm for [ENSG00000236874.1]
WARNING, no entry stored in dbm for [ENSG00000233680.4]
WARNING, no entry stored in dbm for [ENSG00000246859.3]
WARNING, no entry stored in dbm for [ENSG00000270443.1]
WARNING, no entry stored in dbm for [ENSG00000286599.1]
WARNING, no entry stored in dbm for [ENSG00000260701.2]
WARNING, no entry stored in dbm for [ENSG00000235221.3]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000243066.3]
WARNING, no entry stored in dbm for [ENSG00000244692.3]
WARNING, no entry stored in dbm for [ENSG00000243426.3]
WARNING, no entry stored in dbm for [ENSG00000242207.1]
WARNING, no entry stored in dbm for [ENSG00000242125.3]
WARNING, no entry stored in dbm for [ENSG00000255717.7]
WARNING, no entry stored in dbm for [ENSG00000248121.8]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000286630.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000254681.6]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000222386.1]
WARNING, no entry stored in dbm for [ENSG00000257771.6]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000267337.2]
WARNING, no entry stored in dbm for [ENSG00000259889.1]
WARNING, no entry stored in dbm for [ENSG00000215030.5]
WARNING, no entry stored in dbm for [ENSG00000279497.1]
WARNING, no entry stored in dbm for [ENSG00000256969.2]
WARNING, no entry stored in dbm for [ENSG00000268318.5]
WARNING, no entry stored in dbm for [ENSG00000226327.3]
WARNING, no entry stored in dbm for [ENSG00000201955.1]
WARNING, no entry stored in dbm for [ENSG00000202354.1]
WARNING, no entry stored in dbm for [ENSG00000239881.1]
WARNING, no entry stored in dbm for [ENSG00000244538.1]
WARNING, no entry stored in dbm for [ENSG00000231366.1]
WARNING, no entry stored in dbm for [ENSG00000234513.1]
WARNING, no entry stored in dbm for [ENSG00000236477.1]
WARNING, no entry stored in dbm for [ENSG00000242951.1]
WARNING, no entry stored in dbm for [ENSG00000241318.3]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000184139.8]
WARNING, no entry stored in dbm for [ENSG00000215869.4]
WARNING, no entry stored in dbm for [ENSG00000237475.2]
WARNING, no entry stored in dbm for [ENSG00000232228.1]
WARNING, no entry stored in dbm for [ENSG00000253945.1]
WARNING, no entry stored in dbm for [ENSG00000239525.1]
WARNING, no entry stored in dbm for [ENSG00000257074.3]
WARNING, no entry stored in dbm for [ENSG00000241030.1]
WARNING, no entry stored in dbm for [ENSG00000237041.1]
WARNING, no entry stored in dbm for [ENSG00000233287.1]
WARNING, no entry stored in dbm for [ENSG00000225404.2]
WARNING, no entry stored in dbm for [ENSG00000250140.1]
WARNING, no entry stored in dbm for [ENSG00000215030.5]
WARNING, no entry stored in dbm for [ENSG00000217026.3]
WARNING, no entry stored in dbm for [ENSG00000200455.1]
WARNING, no entry stored in dbm for [ENSG00000199849.1]
WARNING, no entry stored in dbm for [ENSG00000202199.1]
WARNING, no entry stored in dbm for [ENSG00000283041.1]
WARNING, no entry stored in dbm for [ENSG00000201822.1]
WARNING, no entry stored in dbm for [ENSG00000264618.2]
WARNING, no entry stored in dbm for [ENSG00000244230.3]
WARNING, no entry stored in dbm for [ENSG00000222386.1]
WARNING, no entry stored in dbm for [ENSG00000201510.1]
WARNING, no entry stored in dbm for [ENSG00000200783.1]
WARNING, no entry stored in dbm for [ENSG00000200475.1]
WARNING, no entry stored in dbm for [ENSG00000222397.1]
WARNING, no entry stored in dbm for [ENSG00000222448.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000234814.8]
WARNING, no entry stored in dbm for [ENSG00000240449.1]
WARNING, no entry stored in dbm for [ENSG00000240449.1]
WARNING, no entry stored in dbm for [ENSG00000286176.2]
WARNING, no entry stored in dbm for [ENSG00000265484.2]
WARNING, no entry stored in dbm for [ENSG00000258168.6]
WARNING, no entry stored in dbm for [ENSG00000267882.2]
WARNING, no entry stored in dbm for [ENSG00000249138.1]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000261035.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000244615.1]
WARNING, no entry stored in dbm for [ENSG00000234176.1]
WARNING, no entry stored in dbm for [ENSG00000270400.1]
WARNING, no entry stored in dbm for [ENSG00000226126.2]
WARNING, no entry stored in dbm for [ENSG00000226445.2]
WARNING, no entry stored in dbm for [ENSG00000241472.7]
WARNING, no entry stored in dbm for [ENSG00000231305.4]
WARNING, no entry stored in dbm for [ENSG00000273643.1]
WARNING, no entry stored in dbm for [ENSG00000253208.1]
WARNING, no entry stored in dbm for [ENSG00000204434.6]
WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000288075.1]
WARNING, no entry stored in dbm for [ENSG00000179899.8]
WARNING, no entry stored in dbm for [ENSG00000176826.15]
WARNING, no entry stored in dbm for [ENSG00000238246.1]
WARNING, no entry stored in dbm for [ENSG00000227893.1]
WARNING, no entry stored in dbm for [ENSG00000187621.15]
WARNING, no entry stored in dbm for [ENSG00000267107.8]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000215160.3]
WARNING, no entry stored in dbm for [ENSG00000248553.1]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000287975.1]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000235377.1]
WARNING, no entry stored in dbm for [ENSG00000260032.2]
WARNING, no entry stored in dbm for [ENSG00000135502.19]
WARNING, no entry stored in dbm for [ENSG00000232742.3]
WARNING, no entry stored in dbm for [ENSG00000257176.3]
WARNING, no entry stored in dbm for [ENSG00000280232.1]
WARNING, no entry stored in dbm for [ENSG00000227007.1]
WARNING, no entry stored in dbm for [ENSG00000240677.1]
WARNING, no entry stored in dbm for [ENSG00000275110.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000270230.1]
WARNING, no entry stored in dbm for [ENSG00000270230.1]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000197847.12]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000260135.7]
WARNING, no entry stored in dbm for [ENSG00000275107.1]
WARNING, no entry stored in dbm for [ENSG00000266325.1]
WARNING, no entry stored in dbm for [ENSG00000262454.4]
WARNING, no entry stored in dbm for [ENSG00000218537.1]
WARNING, no entry stored in dbm for [ENSG00000228109.1]
WARNING, no entry stored in dbm for [ENSG00000269292.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000200356.1]
WARNING, no entry stored in dbm for [ENSG00000207190.1]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000228536.3]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000260290.2]
WARNING, no entry stored in dbm for [ENSG00000259392.2]
WARNING, no entry stored in dbm for [ENSG00000238107.1]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000234476.3]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000250754.6]
WARNING, no entry stored in dbm for [ENSG00000258912.2]
WARNING, no entry stored in dbm for [ENSG00000260192.3]
WARNING, no entry stored in dbm for [ENSG00000237248.5]
WARNING, no entry stored in dbm for [ENSG00000248202.2]
WARNING, no entry stored in dbm for [ENSG00000273356.1]
WARNING, no entry stored in dbm for [ENSG00000272690.6]
WARNING, no entry stored in dbm for [ENSG00000272690.6]
WARNING, no entry stored in dbm for [ENSG00000224655.7]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000223883.2]
WARNING, no entry stored in dbm for [ENSG00000228159.2]
WARNING, no entry stored in dbm for [ENSG00000265766.3]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000250331.2]
WARNING, no entry stored in dbm for [ENSG00000281912.1]
WARNING, no entry stored in dbm for [ENSG00000224559.2]
WARNING, no entry stored in dbm for [ENSG00000243629.2]
WARNING, no entry stored in dbm for [ENSG00000229240.9]
WARNING, no entry stored in dbm for [ENSG00000248360.7]
WARNING, no entry stored in dbm for [ENSG00000248360.7]
WARNING, no entry stored in dbm for [ENSG00000250682.6]
WARNING, no entry stored in dbm for [ENSG00000223404.3]
WARNING, no entry stored in dbm for [ENSG00000253564.1]
WARNING, no entry stored in dbm for [ENSG00000286077.1]
WARNING, no entry stored in dbm for [ENSG00000242242.6]
WARNING, no entry stored in dbm for [ENSG00000253608.2]
WARNING, no entry stored in dbm for [ENSG00000253943.1]
WARNING, no entry stored in dbm for [ENSG00000227674.3]
WARNING, no entry stored in dbm for [ENSG00000261144.1]
WARNING, no entry stored in dbm for [ENSG00000226576.1]
WARNING, no entry stored in dbm for [ENSG00000287405.1]
WARNING, no entry stored in dbm for [ENSG00000228981.3]
WARNING, no entry stored in dbm for [ENSG00000246174.9]
WARNING, no entry stored in dbm for [ENSG00000255653.1]
WARNING, no entry stored in dbm for [ENSG00000229656.7]
WARNING, no entry stored in dbm for [ENSG00000270760.1]
WARNING, no entry stored in dbm for [ENSG00000265170.2]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000213513.3]
WARNING, no entry stored in dbm for [ENSG00000255163.1]
WARNING, no entry stored in dbm for [ENSG00000259746.1]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000255141.1]
WARNING, no entry stored in dbm for [ENSG00000227638.2]
WARNING, no entry stored in dbm for [ENSG00000250197.1]
WARNING, no entry stored in dbm for [ENSG00000251099.2]
WARNING, no entry stored in dbm for [ENSG00000236951.5]
WARNING, no entry stored in dbm for [ENSG00000248785.1]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000185837.3]
WARNING, no entry stored in dbm for [ENSG00000229124.7]
WARNING, no entry stored in dbm for [ENSG00000216436.2]
WARNING, no entry stored in dbm for [ENSG00000218690.2]
WARNING, no entry stored in dbm for [ENSG00000270683.1]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000251451.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000261168.1]
WARNING, no entry stored in dbm for [ENSG00000286182.1]
WARNING, no entry stored in dbm for [ENSG00000185710.9]
WARNING, no entry stored in dbm for [ENSG00000237505.8]
WARNING, no entry stored in dbm for [ENSG00000182814.7]
WARNING, no entry stored in dbm for [ENSG00000227009.1]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000227736.1]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000267784.1]
WARNING, no entry stored in dbm for [ENSG00000276291.5]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000224280.1]
WARNING, no entry stored in dbm for [ENSG00000249684.6]
WARNING, no entry stored in dbm for [ENSG00000242294.6]
WARNING, no entry stored in dbm for [ENSG00000256125.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000255727.2]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000201752.1]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000243064.8]
WARNING, no entry stored in dbm for [ENSG00000247373.3]
WARNING, no entry stored in dbm for [ENSG00000230314.7]
WARNING, no entry stored in dbm for [ENSG00000185710.9]
WARNING, no entry stored in dbm for [ENSG00000233912.1]
WARNING, no entry stored in dbm for [ENSG00000263883.1]
WARNING, no entry stored in dbm for [ENSG00000246627.6]
WARNING, no entry stored in dbm for [ENSG00000259436.1]
WARNING, no entry stored in dbm for [ENSG00000244306.11]
WARNING, no entry stored in dbm for [ENSG00000188460.4]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000235426.2]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000235089.1]
WARNING, no entry stored in dbm for [ENSG00000232354.8]
WARNING, no entry stored in dbm for [ENSG00000261226.1]
WARNING, no entry stored in dbm for [ENSG00000237175.1]
WARNING, no entry stored in dbm for [ENSG00000259248.7]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000269001.2]
WARNING, no entry stored in dbm for [ENSG00000231906.1]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000249245.2]
WARNING, no entry stored in dbm for [ENSG00000270445.1]
WARNING, no entry stored in dbm for [ENSG00000235806.1]
WARNING, no entry stored in dbm for [ENSG00000197744.5]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000280222.1]
WARNING, no entry stored in dbm for [ENSG00000273679.1]
WARNING, no entry stored in dbm for [ENSG00000237931.1]
WARNING, no entry stored in dbm for [ENSG00000226592.1]
WARNING, no entry stored in dbm for [ENSG00000236751.2]
WARNING, no entry stored in dbm for [ENSG00000260765.2]
WARNING, no entry stored in dbm for [ENSG00000283627.1]
WARNING, no entry stored in dbm for [ENSG00000260708.1]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000270558.1]
WARNING, no entry stored in dbm for [ENSG00000262468.6]
WARNING, no entry stored in dbm for [ENSG00000249917.3]
WARNING, no entry stored in dbm for [ENSG00000269293.3]
WARNING, no entry stored in dbm for [ENSG00000230564.1]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000272379.1]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000259953.2]
WARNING, no entry stored in dbm for [ENSG00000197322.4]
WARNING, no entry stored in dbm for [ENSG00000283907.1]
WARNING, no entry stored in dbm for [ENSG00000272735.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000184809.13]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000255176.1]
WARNING, no entry stored in dbm for [ENSG00000255355.1]
WARNING, no entry stored in dbm for [ENSG00000233343.1]
WARNING, no entry stored in dbm for [ENSG00000210077.1]
WARNING, no entry stored in dbm for [ENSG00000197595.4]
WARNING, no entry stored in dbm for [ENSG00000229405.1]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000271697.1]
WARNING, no entry stored in dbm for [ENSG00000231407.6]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000225463.1]
WARNING, no entry stored in dbm for [ENSG00000286528.1]
WARNING, no entry stored in dbm for [ENSG00000286021.2]
WARNING, no entry stored in dbm for [ENSG00000237363.1]
WARNING, no entry stored in dbm for [ENSG00000254112.1]
WARNING, no entry stored in dbm for [ENSG00000237472.1]
WARNING, no entry stored in dbm for [ENSG00000254590.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000255114.1]
WARNING, no entry stored in dbm for [ENSG00000254459.1]
WARNING, no entry stored in dbm for [ENSG00000236304.1]
WARNING, no entry stored in dbm for [ENSG00000267143.1]
WARNING, no entry stored in dbm for [ENSG00000255786.1]
WARNING, no entry stored in dbm for [ENSG00000283633.1]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000236235.1]
WARNING, no entry stored in dbm for [ENSG00000279467.1]
WARNING, no entry stored in dbm for [ENSG00000218418.2]
WARNING, no entry stored in dbm for [ENSG00000286017.1]
WARNING, no entry stored in dbm for [ENSG00000236375.3]
WARNING, no entry stored in dbm for [ENSG00000235085.3]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000287234.1]
WARNING, no entry stored in dbm for [ENSG00000284745.1]
WARNING, no entry stored in dbm for [ENSG00000226197.3]
WARNING, no entry stored in dbm for [ENSG00000283480.1]
WARNING, no entry stored in dbm for [ENSG00000285103.2]
WARNING, no entry stored in dbm for [ENSG00000240291.1]
WARNING, no entry stored in dbm for [ENSG00000285803.1]
WARNING, no entry stored in dbm for [ENSG00000224934.5]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000258561.2]
WARNING, no entry stored in dbm for [ENSG00000232172.1]
WARNING, no entry stored in dbm for [ENSG00000233597.3]
WARNING, no entry stored in dbm for [ENSG00000231416.1]
WARNING, no entry stored in dbm for [ENSG00000213087.3]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000231616.9]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000230615.7]
WARNING, no entry stored in dbm for [ENSG00000279960.1]
WARNING, no entry stored in dbm for [ENSG00000283078.1]
WARNING, no entry stored in dbm for [ENSG00000219699.2]
WARNING, no entry stored in dbm for [ENSG00000258444.1]
WARNING, no entry stored in dbm for [ENSG00000286117.2]
WARNING, no entry stored in dbm for [ENSG00000259977.1]
WARNING, no entry stored in dbm for [ENSG00000287569.1]
WARNING, no entry stored in dbm for [ENSG00000233558.1]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000277938.1]
WARNING, no entry stored in dbm for [ENSG00000287354.1]
WARNING, no entry stored in dbm for [ENSG00000271746.1]
WARNING, no entry stored in dbm for [ENSG00000233175.2]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000226642.1]
WARNING, no entry stored in dbm for [ENSG00000188460.4]
WARNING, no entry stored in dbm for [ENSG00000254319.6]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000223779.6]
WARNING, no entry stored in dbm for [ENSG00000225871.2]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000281571.2]
WARNING, no entry stored in dbm for [ENSG00000223612.3]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000265041.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000260921.1]
WARNING, no entry stored in dbm for [ENSG00000287765.1]
WARNING, no entry stored in dbm for [ENSG00000271623.1]
WARNING, no entry stored in dbm for [ENSG00000257746.2]
WARNING, no entry stored in dbm for [ENSG00000180581.7]
WARNING, no entry stored in dbm for [ENSG00000282924.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000260670.1]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000244245.1]
WARNING, no entry stored in dbm for [ENSG00000235685.2]
WARNING, no entry stored in dbm for [ENSG00000280193.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000260177.1]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000285948.1]
WARNING, no entry stored in dbm for [ENSG00000260971.4]
WARNING, no entry stored in dbm for [ENSG00000286619.1]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000260082.1]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000273724.1]
WARNING, no entry stored in dbm for [ENSG00000272763.1]
WARNING, no entry stored in dbm for [ENSG00000255454.1]
WARNING, no entry stored in dbm for [ENSG00000225386.2]
WARNING, no entry stored in dbm for [ENSG00000287797.1]
WARNING, no entry stored in dbm for [ENSG00000248779.1]
WARNING, no entry stored in dbm for [ENSG00000250860.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000230515.1]
WARNING, no entry stored in dbm for [ENSG00000259006.1]
WARNING, no entry stored in dbm for [ENSG00000234686.1]
WARNING, no entry stored in dbm for [ENSG00000266283.1]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000253821.2]
WARNING, no entry stored in dbm for [ENSG00000274776.1]
WARNING, no entry stored in dbm for [ENSG00000263244.2]
WARNING, no entry stored in dbm for [ENSG00000227372.12]
WARNING, no entry stored in dbm for [ENSG00000286197.1]
WARNING, no entry stored in dbm for [ENSG00000254578.1]
WARNING, no entry stored in dbm for [ENSG00000224573.1]
WARNING, no entry stored in dbm for [ENSG00000242083.2]
WARNING, no entry stored in dbm for [ENSG00000239300.6]
WARNING, no entry stored in dbm for [ENSG00000261776.1]
WARNING, no entry stored in dbm for [ENSG00000286935.1]
WARNING, no entry stored in dbm for [ENSG00000259511.3]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000275833.1]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000254394.2]
WARNING, no entry stored in dbm for [ENSG00000261054.1]
WARNING, no entry stored in dbm for [ENSG00000286090.1]
WARNING, no entry stored in dbm for [ENSG00000260005.6]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000248223.1]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000276807.1]
WARNING, no entry stored in dbm for [ENSG00000286430.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000261043.5]
WARNING, no entry stored in dbm for [ENSG00000267383.7]
WARNING, no entry stored in dbm for [ENSG00000287403.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000274184.1]
WARNING, no entry stored in dbm for [ENSG00000253184.1]
WARNING, no entry stored in dbm for [ENSG00000266978.1]
WARNING, no entry stored in dbm for [ENSG00000263547.2]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000270495.1]
WARNING, no entry stored in dbm for [ENSG00000248406.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000262202.4]
WARNING, no entry stored in dbm for [ENSG00000262202.4]
WARNING, no entry stored in dbm for [ENSG00000281195.1]
WARNING, no entry stored in dbm for [ENSG00000255655.1]
WARNING, no entry stored in dbm for [ENSG00000284959.2]
WARNING, no entry stored in dbm for [ENSG00000279865.1]
WARNING, no entry stored in dbm for [ENSG00000196205.8]
WARNING, no entry stored in dbm for [ENSG00000246225.7]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000273419.1]
WARNING, no entry stored in dbm for [ENSG00000225792.2]
WARNING, no entry stored in dbm for [ENSG00000214770.3]
WARNING, no entry stored in dbm for [ENSG00000268895.6]


	* STAR-Fusion complete.  See output: /tmp/nxf.NBEjAmFgsZ/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)