AIH curated blacklist: matched 3 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 146
Pass (FILTER=PASS): 21 (14.4%)
Fail (FILTER=FAIL): 125 (85.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 3
All 3 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 22
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 16
confidence_below_min(low<high): 15
confidence_below_min(medium<high): 14
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
total_reads_below_min(7.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 2
total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 2
Breakdown by confidence:
high: 21 pass, 11 fail (total: 32)
low: 0 pass, 56 fail (total: 56)
medium: 0 pass, 58 fail (total: 58)
Arriba filter: 146 rows -> 21 PASS; wrote BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1.arriba.fusions.filtered.tsv and BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1.arriba.fusions.filter_summary.txt