File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/a83eb37728439e64563ad02d1242fa/.command.err
Size
121.1 KB
Attempt
-ctat genome lib [/tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.x1oWKJ76RI/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary
-sample contains 294215781 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir  -J /tmp/nxf.x1oWKJ76RI/BVT_FFPE_TRNA_utn_09_A23WKFTLT4_3.Chimeric.out.junction  -O /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.x1oWKJ76RI/BVT_FFPE_TRNA_utn_09_A23WKFTLT4_3.Chimeric.out.junction
-building interval tree based on /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=66666.67/min 
[20000], rate=70588.24/min 
[30000], rate=72000.00/min 
[40000], rate=72727.27/min 
[50000], rate=73170.73/min 
[60000], rate=70588.24/min 
[70000], rate=66666.67/min 
[80000], rate=69565.22/min 
[90000], rate=71052.63/min 
[100000], rate=73170.73/min 
[110000], rate=74157.30/min 
[120000], rate=75789.47/min 
[130000], rate=77227.72/min 
[140000], rate=77777.78/min 
[150000], rate=75630.25/min 
[160000], rate=72727.27/min 
[170000], rate=70344.83/min 
[180000], rate=68354.43/min 
[190000], rate=67857.14/min 
[200000], rate=67039.11/min 
[210000], rate=65968.59/min 
[220000], rate=65346.53/min 
[230000], rate=64788.73/min 
[240000], rate=64285.71/min 
[250000], rate=64102.56/min 
[260000], rate=63673.47/min 
[270000], rate=63281.25/min 
[280000], rate=63396.23/min 
[290000], rate=63272.73/min 
[300000], rate=63604.24/min 
[310000], rate=64137.93/min 
[320000], rate=64214.05/min 
[330000], rate=64705.88/min 
[340000], rate=64968.15/min 
[350000], rate=65217.39/min 
[360000], rate=66055.05/min 
[370000], rate=66268.66/min 
[380000], rate=66472.30/min 
[390000], rate=66857.14/min 
[400000], rate=67226.89/min 
[410000], rate=67955.80/min 
[420000], rate=68664.85/min 
[430000], rate=69168.90/min 
[440000], rate=69473.68/min 
[450000], rate=69948.19/min 
[460000], rate=70408.16/min 
[470000], rate=70676.69/min 
[480000], rate=70935.96/min 
[490000], rate=71359.22/min 
[500000], rate=71770.33/min 
[510000], rate=72000.00/min 
[520000], rate=72389.79/min 
[530000], rate=72768.88/min 
[540000], rate=73303.17/min 
[550000], rate=73825.50/min 
[560000], rate=74336.28/min 
[570000], rate=74672.49/min 
[580000], rate=75161.99/min 
[590000], rate=75641.03/min 
[600000], rate=76109.94/min 
[610000], rate=76569.04/min 
[620000], rate=76701.03/min 
[630000], rate=77300.61/min 
[640000], rate=77575.76/min 
[650000], rate=77227.72/min 
[660000], rate=76744.19/min 
[670000], rate=76425.86/min 
[680000], rate=76119.40/min 
[690000], rate=75824.18/min 
[700000], rate=75539.57/min 
[710000], rate=75398.23/min 
[720000], rate=75130.43/min 
[730000], rate=74871.79/min 
[740000], rate=74621.85/min 
[750000], rate=74257.43/min 
[760000], rate=74146.34/min 
[770000], rate=74038.46/min 
[780000], rate=73933.65/min 
[790000], rate=73831.78/min 
[800000], rate=73506.89/min 
[810000], rate=73192.77/min 
[820000], rate=72997.03/min 
[830000], rate=72700.73/min 
[840000], rate=72413.79/min 
[850000], rate=72340.43/min 
[860000], rate=72167.83/min 
[870000], rate=72000.00/min 
[880000], rate=71836.73/min 
[890000], rate=71677.85/min 
[900000], rate=71618.04/min 
[910000], rate=71559.63/min 
[920000], rate=71410.09/min 
[930000], rate=71355.50/min 
[940000], rate=71392.41/min 
[950000], rate=71428.57/min 
[960000], rate=71464.02/min 
[970000], rate=71586.72/min 
[980000], rate=71619.98/min 
[990000], rate=71739.13/min 
[1000000], rate=71856.29/min 
[1010000], rate=71971.50/min 
[1020000], rate=72084.81/min 
[1030000], rate=72280.70/min 
[1040000], rate=72727.27/min 
[1050000], rate=72916.67/min 
[1060000], rate=73103.45/min 
[1070000], rate=73287.67/min 
[1080000], rate=73552.78/min 
[1090000], rate=73731.68/min 
[1100000], rate=73991.03/min 
[1110000], rate=74247.49/min 
[1120000], rate=74501.11/min 
[1130000], rate=74669.60/min 
[1140000], rate=74917.85/min 
[1150000], rate=75081.61/min 
[1160000], rate=75243.24/min 
[1170000], rate=75402.79/min 
[1180000], rate=74841.44/min 
[1190000], rate=74375.00/min 
[1200000], rate=74074.07/min 
[1210000], rate=73855.54/min 
[1220000], rate=73641.85/min 
[1230000], rate=73432.84/min 
[1240000], rate=72869.74/min 
[1250000], rate=72393.82/min 
[1260000], rate=72000.00/min 
[1270000], rate=71683.91/min 
[1280000], rate=71309.19/min 
[1290000], rate=71009.17/min 
[1300000], rate=70844.69/min 
[1310000], rate=70367.05/min 
[1320000], rate=69964.66/min 
[1330000], rate=69633.51/min 
[1340000], rate=69430.05/min 
[1350000], rate=69171.65/min 
[1360000], rate=69035.53/min 
[1370000], rate=68901.93/min 
[1380000], rate=68656.72/min 
[1390000], rate=68416.74/min 
[1400000], rate=68126.52/min 
[1410000], rate=68006.43/min 
[1420000], rate=67834.39/min 
[1430000], rate=67612.29/min 
[1440000], rate=67552.78/min 
[1450000], rate=67546.58/min 
[1460000], rate=67436.49/min 
[1470000], rate=67276.89/min 
[1480000], rate=67272.73/min 
[1490000], rate=67167.54/min 
[1500000], rate=67164.18/min 
[1510000], rate=67210.68/min 
[1520000], rate=67256.64/min 
[1530000], rate=67302.05/min 
[1540000], rate=67445.26/min 
[1550000], rate=67489.11/min 
[1560000], rate=67581.23/min 
[1570000], rate=67672.41/min 
[1580000], rate=67811.16/min 
[1590000], rate=67948.72/min 
[1600000], rate=68085.11/min 
[1610000], rate=68268.55/min 
[1620000], rate=68402.53/min 
[1630000], rate=68631.58/min 
[1640000], rate=68811.19/min 
[1650000], rate=68941.50/min 
[1660000], rate=69118.67/min 
[1670000], rate=69294.61/min 
[1680000], rate=69230.77/min 
[1690000], rate=69120.65/min 
[1700000], rate=68965.52/min 
[1710000], rate=68905.31/min 
[1720000], rate=68662.67/min 
[1730000], rate=68469.66/min 
[1740000], rate=68324.61/min 
[1750000], rate=68137.57/min 
[1760000], rate=67997.42/min 
[1770000], rate=67902.81/min 
[1780000], rate=67895.74/min 
[1790000], rate=67931.69/min 
[1800000], rate=68010.08/min 
[1810000], rate=68045.11/min 
[1820000], rate=68079.80/min 
[1830000], rate=68198.76/min 
[1840000], rate=68274.58/min 
[1850000], rate=68307.69/min 
[1860000], rate=68382.35/min 
[1870000], rate=68498.17/min 
[1880000], rate=68613.14/min 
[1890000], rate=68727.27/min 
[1900000], rate=68840.58/min 
[1910000], rate=68911.61/min 
[1920000], rate=69064.75/min 
[1930000], rate=69216.98/min 
[1940000], rate=69326.98/min 
[1950000], rate=69395.02/min 
[1960000], rate=69503.55/min 
[1970000], rate=69611.31/min 
[1980000], rate=69759.25/min 
[1990000], rate=69865.42/min 
[2000000], rate=70052.54/min 
[2010000], rate=70157.07/min 
[2020000], rate=70342.43/min 
[2030000], rate=70445.34/min 
[2040000], rate=70588.24/min 
[2050000], rate=70771.00/min 
[2060000], rate=70871.56/min 
[2070000], rate=71052.63/min 
[2080000], rate=71192.24/min 
[2090000], rate=71290.51/min 
[2100000], rate=71266.97/min 
[2110000], rate=71364.15/min 
[2120000], rate=71460.67/min 
[2130000], rate=71556.55/min 
[2140000], rate=71651.79/min 
[2150000], rate=71626.87/min 
[2160000], rate=71483.73/min 
[2170000], rate=71420.74/min 
[2180000], rate=71319.52/min 
[2190000], rate=71258.13/min 
[2200000], rate=71082.39/min 
[2210000], rate=70833.33/min 
[2220000], rate=70663.13/min 
[2230000], rate=70569.62/min 
[2240000], rate=70477.19/min 
[2250000], rate=70385.82/min 
[2260000], rate=70295.49/min 
[2270000], rate=70206.19/min 
[2280000], rate=70225.87/min 
[2290000], rate=70173.65/min 
[2300000], rate=70157.60/min 
[2310000], rate=70141.70/min 
[2320000], rate=70161.29/min 
[2330000], rate=70215.97/min 
[2340000], rate=70200.00/min 
[2350000], rate=70219.12/min 
[2360000], rate=70099.01/min 
[2370000], rate=70083.79/min 
[2380000], rate=70379.50/min 
[2390000], rate=70605.61/min 
[2400000], rate=70692.19/min 
[2410000], rate=70778.27/min 
[2420000], rate=70863.84/min 
[2430000], rate=70914.40/min 
[2440000], rate=70964.61/min 
[2450000], rate=71048.82/min 
[2460000], rate=71132.53/min 
[2470000], rate=71079.14/min 
[2480000], rate=70992.37/min 
[2490000], rate=70872.87/min 
[2500000], rate=70788.11/min 
[2510000], rate=70737.44/min 
[2520000], rate=70819.67/min 
[2530000], rate=70703.31/min 
[2540000], rate=70620.95/min 
[2550000], rate=70506.91/min 
[2560000], rate=70394.13/min 
[2570000], rate=70378.82/min 
[2580000], rate=70267.82/min 
[2590000], rate=70221.42/min 
[2600000], rate=70238.63/min 
[2610000], rate=70192.74/min 
[2620000], rate=70178.57/min 
[2630000], rate=70195.73/min 
[2640000], rate=70212.77/min 
[2650000], rate=70229.68/min 
[2660000], rate=70308.37/min 
[2670000], rate=70355.73/min 
[2680000], rate=70371.99/min 
[2690000], rate=70418.85/min 
[2700000], rate=70526.77/min 
[2710000], rate=70664.93/min 
[2720000], rate=70741.22/min 
[2730000], rate=70909.09/min 
[2740000], rate=70953.82/min 
[2750000], rate=70967.74/min 
[2760000], rate=70951.16/min 
[2770000], rate=70964.99/min 
[2780000], rate=71008.94/min 
[2790000], rate=71113.00/min 
[2800000], rate=71186.44/min -building interval tree based on /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=54545.45/min 
[20000], rate=52173.91/min 
[30000], rate=52941.18/min 
[40000], rate=52173.91/min 
[50000], rate=52631.58/min 
[60000], rate=52941.18/min 
[70000], rate=53164.56/min 
[80000], rate=52747.25/min 
[90000], rate=52941.18/min 
[100000], rate=54054.05/min 
[110000], rate=54545.45/min 
[120000], rate=55384.62/min 
[130000], rate=56521.74/min 
[140000], rate=56756.76/min 
[150000], rate=56962.03/min 
[160000], rate=57142.86/min 
[170000], rate=57627.12/min 
[180000], rate=58064.52/min 
[190000], rate=58461.54/min 
[200000], rate=59113.30/min 
[210000], rate=59715.64/min 
[220000], rate=60273.97/min 
[230000], rate=61061.95/min 
[240000], rate=61538.46/min 
[250000], rate=62240.66/min 
[260000], rate=62903.23/min 
[270000], rate=63529.41/min 
[280000], rate=64122.14/min 
[290000], rate=64925.37/min 
[300000], rate=65454.55/min 
[310000], rate=66192.17/min 
[320000], rate=66666.67/min 
[330000], rate=67346.94/min 
[340000], rate=68000.00/min 
[350000], rate=69078.95/min 
[360000], rate=69902.91/min 
[370000], rate=70700.64/min 
[380000], rate=71250.00/min 
[390000], rate=72000.00/min 
[400000], rate=72727.27/min 
[410000], rate=73432.84/min 
[420000], rate=72622.48/min 
[430000], rate=71666.67/min 
[440000], rate=70400.00/min 
[450000], rate=69053.71/min 
[460000], rate=67813.27/min 
[470000], rate=66509.43/min 
[480000], rate=65753.42/min 
[490000], rate=64615.38/min 
[500000], rate=63559.32/min 
[510000], rate=62962.96/min 
[520000], rate=62151.39/min 
[530000], rate=61627.91/min 
[540000], rate=61016.95/min 
[550000], rate=60550.46/min 
[560000], rate=60000.00/min 
[570000], rate=59581.88/min 
[580000], rate=59284.50/min 
[590000], rate=58901.83/min 
[600000], rate=58631.92/min 
[610000], rate=58466.45/min 
[620000], rate=58215.96/min 
[630000], rate=58153.85/min 
[640000], rate=58181.82/min 
[650000], rate=58122.21/min 
[660000], rate=58149.78/min 
[670000], rate=57925.07/min 
[680000], rate=57708.63/min 
[690000], rate=57579.97/min 
[700000], rate=57692.31/min 
[710000], rate=57723.58/min 
[720000], rate=57676.90/min 
[730000], rate=57707.51/min 
[740000], rate=57662.34/min 
[750000], rate=57766.37/min 
[760000], rate=57941.55/min 
[770000], rate=57967.38/min 
[780000], rate=57992.57/min 
[790000], rate=57875.46/min 
[800000], rate=57761.73/min 
[810000], rate=57857.14/min 
[820000], rate=57814.34/min 
[830000], rate=57906.98/min 
[840000], rate=57997.70/min 
[850000], rate=57954.55/min 
[860000], rate=57977.53/min 
[870000], rate=58064.52/min 
[880000], rate=58149.78/min 
[890000], rate=58233.37/min 
[900000], rate=58315.33/min 
[910000], rate=58583.69/min 
[920000], rate=58661.00/min 
[930000], rate=58736.84/min 
[940000], rate=58872.65/min 
[950000], rate=58945.19/min 
[960000], rate=59076.92/min 
[970000], rate=59327.22/min 
[980000], rate=59574.47/min 
[990000], rate=60000.00/min 
[1000000], rate=60240.96/min 
[1010000], rate=60418.74/min 
[1020000], rate=60594.06/min 
[1030000], rate=60766.96/min 
[1040000], rate=60997.07/min 
[1050000], rate=61284.05/min 
[1060000], rate=61508.70/min 
[1070000], rate=61790.18/min 
[1080000], rate=62068.97/min 
[1090000], rate=62285.71/min 
[1100000], rate=62559.24/min 
[1110000], rate=62770.97/min 
[1120000], rate=62921.35/min 
[1130000], rate=62952.65/min 
[1140000], rate=63041.47/min 
[1150000], rate=63129.00/min 
[1160000], rate=63272.73/min 
[1170000], rate=63414.63/min 
[1180000], rate=63554.76/min 
[1190000], rate=63579.70/min 
[1200000], rate=63548.10/min 
[1210000], rate=63572.68/min 
[1220000], rate=63596.87/min 
[1230000], rate=63730.57/min 
[1240000], rate=63917.53/min 
[1250000], rate=64102.56/min 
[1260000], rate=64176.57/min 
[1270000], rate=64358.11/min 
[1280000], rate=64537.82/min 
[1290000], rate=64715.72/min 
[1300000], rate=64945.88/min 
[1310000], rate=65120.13/min 
[1320000], rate=65292.66/min 
[1330000], rate=65409.84/min 
[1340000], rate=65525.67/min 
[1350000], rate=65693.43/min 
[1360000], rate=65859.56/min 
[1370000], rate=65971.11/min 
[1380000], rate=66134.19/min 
[1390000], rate=66295.71/min 
[1400000], rate=66613.80/min 
[1410000], rate=66824.64/min 
[1420000], rate=67245.46/min 
[1430000], rate=67665.62/min 
[1440000], rate=67871.17/min 
[1450000], rate=68075.12/min 
[1460000], rate=68330.73/min 
[1470000], rate=68372.09/min 
[1480000], rate=68677.49/min 
[1490000], rate=68928.30/min 
[1500000], rate=69337.44/min 
[1510000], rate=69745.96/min 
[1520000], rate=69938.65/min 
[1530000], rate=70076.34/min 
[1540000], rate=70426.83/min 
[1550000], rate=70668.69/min 
[1560000], rate=71070.62/min 
[1570000], rate=71471.93/min 
[1580000], rate=71655.33/min 
[1590000], rate=71837.35/min 
[1600000], rate=72234.76/min 
[1610000], rate=72631.58/min 
[1620000], rate=73082.71/min 
[1630000], rate=73313.34/min 
[1640000], rate=73214.29/min 
[1650000], rate=73496.66/min 
[1660000], rate=73668.64/min 
[1670000], rate=73784.98/min 
[1680000], rate=74226.80/min 
[1690000], rate=74613.69/min 
[1700000], rate=74834.92/min 
[1710000], rate=75109.81/min 
[1720000], rate=75273.52/min 
[1730000], rate=75436.05/min 
[1740000], rate=75433.53/min 
[1750000], rate=75539.57/min 
[1760000], rate=75644.70/min 
[1770000], rate=75748.93/min 
[1780000], rate=75852.27/min 
[1790000], rate=76008.49/min 
[1800000], rate=76056.34/min 
[1810000], rate=76157.08/min 
[1820000], rate=76256.98/min 
[1830000], rate=76675.98/min 
[1840000], rate=76826.72/min 
[1850000], rate=76923.08/min 
[1860000], rate=77018.63/min 
[1870000], rate=77007.55/min 
[1880000], rate=76996.59/min 
[1890000], rate=77038.04/min 
[1900000], rate=77131.26/min 
[1910000], rate=77119.78/min 
[1920000], rate=76902.54/min 
[1930000], rate=76790.45/min 
[1940000], rate=76679.84/min 
[1950000], rate=76671.04/min 
[1960000], rate=76712.33/min 
[1970000], rate=76753.25/min 
[1980000], rate=76793.79/min 
[1990000], rate=76883.45/min 
[2000000], rate=76923.08/min 
[2010000], rate=77011.49/min 
[2020000], rate=77050.22/min 
[2030000], rate=77137.43/min 
[2040000], rate=77223.97/min 
[2050000], rate=77309.87/min 
[2060000], rate=77346.68/min 
[2070000], rate=77431.42/min 
[2080000], rate=77515.53/min 
[2090000], rate=77599.01/min 
[2100000], rate=77681.87/min 
[2110000], rate=77383.86/min 
[2120000], rate=76858.01/min 
[2130000], rate=76298.51/min 
[2140000], rate=75931.40/min 
[2150000], rate=75748.68/min 
[2160000], rate=75612.60/min 
[2170000], rate=75390.85/min 
[2180000], rate=75215.64/min 
[2190000], rate=75042.83/min 
[2200000], rate=74957.41/min 
[2210000], rate=74788.49/min 
[2220000], rate=74621.85/min 
[2230000], rate=74209.65/min 
[2240000], rate=73846.15/min 
[2250000], rate=73529.41/min 
[2260000], rate=73257.70/min 
[2270000], rate=73029.49/min 
[2280000], rate=72611.46/min 
[2290000], rate=72050.34/min 
[2300000], rate=71725.57/min 
[2310000], rate=71406.49/min 
[2320000], rate=71202.05/min 
[2330000], rate=70964.47/min 
[2340000], rate=70659.29/min 
[2350000], rate=70570.57/min 
[2360000], rate=70342.77/min 
[2370000], rate=70118.34/min 
[2380000], rate=69931.44/min 
[2390000], rate=69747.08/min 
[2400000], rate=69598.84/min 
[2410000], rate=69552.67/min 
[2420000], rate=69473.68/min 
[2430000], rate=69362.51/min 
[2440000], rate=69318.18/min 
[2450000], rate=69274.27/min 
[2460000], rate=69230.77/min 
[2470000], rate=69187.68/min 
[2480000], rate=69144.98/min 
[2490000], rate=69102.68/min 
[2500000], rate=69060.77/min 
[2510000], rate=69050.89/min 
[2520000], rate=69072.64/min 
[2530000], rate=69094.22/min 
[2540000], rate=69115.65/min 
[2550000], rate=69168.17/min 
[2560000], rate=69251.58/min 
[2570000], rate=69334.53/min 
[2580000], rate=69417.04/min 
[2590000], rate=69499.11/min 
[2600000], rate=69611.78/min 
[2610000], rate=69723.95/min 
[2620000], rate=69835.63/min 
[2630000], rate=69977.83/min 
[2640000], rate=70057.50/min 
[2650000], rate=69951.61/min 
[2660000], rate=69816.27/min 
[2670000], rate=69621.90/min 
[2680000], rate=69340.23/min 
[2690000], rate=69210.98/min 
[2700000], rate=69053.71/min 
[2710000], rate=68956.74/min 
[2720000], rate=68802.70/min 
[2730000], rate=68679.25/min 
[2740000], rate=68557.13/min 
[2750000], rate=68493.15/min 
[2760000], rate=68401.49/min 
[2770000], rate=68338.82/min 
[2780000], rate=68192.97/min 
[2790000], rate=68076.45/min 
[2800000], rate=68043.74/min -building interval tree based on /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=85714.29/min 
[20000], rate=80000.00/min 
[30000], rate=75000.00/min 
[40000], rate=77419.35/min 
[50000], rate=81081.08/min 
[60000], rate=83720.93/min 
[70000], rate=85714.29/min 
[80000], rate=82758.62/min 
[90000], rate=81818.18/min 
[100000], rate=81081.08/min 
[110000], rate=81481.48/min 
[120000], rate=80898.88/min 
[130000], rate=80412.37/min 
[140000], rate=80000.00/min 
[150000], rate=80357.14/min 
[160000], rate=80672.27/min 
[170000], rate=80952.38/min 
[180000], rate=81203.01/min 
[190000], rate=82014.39/min 
[200000], rate=82758.62/min 
[210000], rate=82894.74/min 
[220000], rate=83018.87/min 
[230000], rate=82142.86/min 
[240000], rate=80000.00/min 
[250000], rate=78534.03/min 
[260000], rate=78000.00/min 
[270000], rate=76777.25/min 
[280000], rate=75675.68/min 
[290000], rate=75000.00/min 
[300000], rate=74688.80/min 
[310000], rate=74400.00/min 
[320000], rate=74131.27/min 
[330000], rate=74157.30/min 
[340000], rate=73646.21/min 
[350000], rate=73684.21/min 
[360000], rate=73720.14/min 
[370000], rate=73754.15/min 
[380000], rate=73786.41/min 
[390000], rate=74050.63/min 
[400000], rate=74074.07/min 
[410000], rate=74320.24/min 
[420000], rate=74556.21/min 
[430000], rate=75000.00/min 
[440000], rate=75428.57/min 
[450000], rate=75842.70/min 
[460000], rate=76243.09/min 
[470000], rate=76630.43/min 
[480000], rate=77005.35/min 
[490000], rate=77165.35/min 
[500000], rate=77319.59/min 
[510000], rate=77862.60/min 
[520000], rate=78589.42/min 
[530000], rate=79301.75/min 
[540000], rate=79802.96/min 
[550000], rate=80487.80/min 
[560000], rate=81355.93/min 
[570000], rate=82211.54/min 
[580000], rate=82660.33/min 
[590000], rate=81944.44/min 
[600000], rate=81447.96/min 
[610000], rate=80973.45/min 
[620000], rate=80694.14/min 
[630000], rate=80084.75/min 
[640000], rate=79833.68/min 
[650000], rate=79429.74/min 
[660000], rate=79200.00/min 
[670000], rate=79133.86/min 
[680000], rate=78916.83/min 
[690000], rate=78857.14/min 
[700000], rate=78799.25/min 
[710000], rate=78888.89/min 
[720000], rate=78832.12/min 
[730000], rate=79061.37/min 
[740000], rate=79003.56/min 
[750000], rate=79086.12/min 
[760000], rate=79166.67/min 
[770000], rate=79109.59/min 
[780000], rate=79322.03/min 
[790000], rate=79663.87/min 
[800000], rate=80000.00/min 
[810000], rate=80198.02/min 
[820000], rate=80261.01/min 
[830000], rate=80452.34/min 
[840000], rate=80640.00/min 
[850000], rate=80441.64/min 
[860000], rate=79629.63/min 
[870000], rate=78851.96/min 
[880000], rate=78106.51/min 
[890000], rate=77391.30/min 
[900000], rate=76704.55/min 
[910000], rate=76363.64/min 
[920000], rate=76243.09/min 
[930000], rate=76648.35/min 
[940000], rate=76113.36/min 
[950000], rate=75697.21/min 
[960000], rate=75195.82/min 
[970000], rate=74615.38/min 
[980000], rate=74242.42/min 
[990000], rate=73972.60/min 
[1000000], rate=73710.07/min 
[1010000], rate=73543.69/min 
[1020000], rate=73293.41/min 
[1030000], rate=72963.40/min 
[1040000], rate=72389.79/min 
[1050000], rate=72000.00/min 
[1060000], rate=71783.30/min 
[1070000], rate=71651.79/min 
[1080000], rate=71523.18/min 
[1090000], rate=71397.38/min 
[1100000], rate=71351.35/min 
[1110000], rate=71002.13/min 
[1120000], rate=70514.17/min 
[1130000], rate=70113.75/min 
[1140000], rate=69867.21/min 
[1150000], rate=69767.44/min 
[1160000], rate=69739.48/min 
[1170000], rate=69781.31/min 
[1180000], rate=69685.04/min 
[1190000], rate=69726.56/min 
[1200000], rate=69699.90/min 
[1210000], rate=69606.90/min 
[1220000], rate=69714.29/min 
[1230000], rate=69688.39/min 
[1240000], rate=69597.75/min 
[1250000], rate=69508.80/min 
[1260000], rate=69357.80/min 
[1270000], rate=69209.81/min 
[1280000], rate=69064.75/min 
[1290000], rate=69045.50/min 
[1300000], rate=69026.55/min 
[1310000], rate=69129.29/min 
[1320000], rate=69109.95/min 
[1330000], rate=69031.14/min 
[1340000], rate=68894.60/min 
[1350000], rate=68936.17/min 
[1360000], rate=69035.53/min 
[1370000], rate=69017.63/min 
[1380000], rate=68942.55/min 
[1390000], rate=68811.88/min 
[1400000], rate=68683.57/min 
[1410000], rate=68724.61/min 
[1420000], rate=68709.68/min 
[1430000], rate=68750.00/min 
[1440000], rate=68735.08/min 
[1450000], rate=68774.70/min 
[1460000], rate=68759.81/min 
[1470000], rate=68852.46/min 
[1480000], rate=68944.10/min 
[1490000], rate=69088.10/min 
[1500000], rate=69284.06/min 
[1510000], rate=69372.13/min 
[1520000], rate=69512.20/min 
[1530000], rate=69703.87/min 
[1540000], rate=69841.27/min 
[1550000], rate=69977.43/min 
[1560000], rate=70059.88/min 
[1570000], rate=69829.50/min 
[1580000], rate=69450.55/min 
[1590000], rate=69130.43/min 
[1600000], rate=68571.43/min 
[1610000], rate=67932.49/min 
[1620000], rate=67266.44/min 
[1630000], rate=66666.67/min 
[1640000], rate=66262.63/min 
[1650000], rate=65868.26/min 
[1660000], rate=65483.23/min 
[1670000], rate=65276.87/min 
[1680000], rate=64990.33/min 
[1690000], rate=64792.33/min 
[1700000], rate=64434.62/min 
[1710000], rate=64084.95/min 
[1720000], rate=63703.70/min 
[1730000], rate=63408.67/min 
[1740000], rate=63234.40/min 
[1750000], rate=63100.96/min 
[1760000], rate=62857.14/min 
[1770000], rate=62691.85/min 
[1780000], rate=62419.64/min 
[1790000], rate=62333.14/min 
[1800000], rate=62283.74/min 
[1810000], rate=62092.62/min 
[1820000], rate=61904.76/min 
[1830000], rate=61754.78/min 
[1840000], rate=61607.14/min 
[1850000], rate=61461.79/min 
[1860000], rate=61251.37/min 
[1870000], rate=61077.84/min 
[1880000], rate=61005.95/min 
[1890000], rate=60869.57/min 
[1900000], rate=60702.88/min 
[1910000], rate=60538.83/min 
[1920000], rate=60440.71/min 
[1930000], rate=60281.10/min 
[1940000], rate=60248.45/min 
[1950000], rate=60278.21/min 
[1960000], rate=60276.78/min 
[1970000], rate=60275.37/min 
[1980000], rate=60243.41/min 
[1990000], rate=60211.80/min 
[2000000], rate=60180.54/min 
[2010000], rate=60119.64/min 
[2020000], rate=60059.46/min 
[2030000], rate=60088.80/min 
[2040000], rate=60088.37/min 
[2050000], rate=60058.59/min 
[2060000], rate=60029.14/min 
[2070000], rate=59913.17/min 
[2080000], rate=59913.59/min 
[2090000], rate=59856.80/min 
[2100000], rate=59772.30/min 
[2110000], rate=59660.70/min 
[2120000], rate=59467.04/min 
[2130000], rate=59359.03/min 
[2140000], rate=59252.42/min 
[2150000], rate=59283.09/min 
[2160000], rate=59259.26/min 
[2170000], rate=59181.82/min 
[2180000], rate=59185.52/min 
[2190000], rate=59162.54/min 
[2200000], rate=59219.38/min 
[2210000], rate=59249.33/min 
[2220000], rate=59305.43/min 
[2230000], rate=59308.51/min 
[2240000], rate=59285.40/min 
[2250000], rate=59366.75/min 
[2260000], rate=59447.61/min 
[2270000], rate=59527.97/min 
[2280000], rate=59633.83/min 
[2290000], rate=59713.17/min 
[2300000], rate=59766.13/min 
[2310000], rate=59818.73/min 
[2320000], rate=59845.23/min 
[2330000], rate=59922.85/min 
[2340000], rate=60000.00/min 
[2350000], rate=60025.54/min 
[2360000], rate=60050.89/min 
[2370000], rate=60101.44/min 
[2380000], rate=60151.64/min 
[2390000], rate=60252.10/min 
[2400000], rate=60326.77/min 
[2410000], rate=60401.00/min 
[2420000], rate=60474.80/min 
[2430000], rate=60648.92/min 
[2440000], rate=60847.88/min 
[2450000], rate=60970.55/min 
[2460000], rate=61042.18/min 
[2470000], rate=61138.61/min 
[2480000], rate=61234.57/min 
[2490000], rate=61330.05/min 
[2500000], rate=61374.80/min 
[2510000], rate=61419.25/min 
[2520000], rate=61538.46/min 
[2530000], rate=61632.16/min 
[2540000], rate=61476.40/min 
[2550000], rate=61298.08/min 
[2560000], rate=61097.85/min 
[2570000], rate=60948.62/min 
[2580000], rate=60825.15/min 
[2590000], rate=60679.42/min 
[2600000], rate=60535.51/min 
[2610000], rate=60393.37/min 
[2620000], rate=60276.07/min 
[2630000], rate=60137.20/min 
[2640000], rate=60000.00/min 
[2650000], rate=59887.01/min 
[2660000], rate=59730.54/min 
[2670000], rate=59620.39/min 
[2680000], rate=59511.47/min 
[2690000], rate=59403.75/min 
[2700000], rate=59232.18/min 
[2710000], rate=59170.31/min 
[2720000], rate=59087.62/min 
[2730000], rate=58963.28/min 
[2740000], rate=58861.44/min 
[2750000], rate=58823.53/min 
[2760000], rate=58681.79/min 
[2770000], rate=58645.02/min 
[2780000], rate=58546.86/min 
[2790000], rate=58490.57/min -building interval tree based on /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=120000.00/min 
[20000], rate=120000.00/min 
[30000], rate=128571.43/min 
[40000], rate=133333.33/min 
[50000], rate=142857.14/min 
[60000], rate=163636.36/min 
[70000], rate=182608.70/min 
[80000], rate=177777.78/min 
[90000], rate=200000.00/min 
[100000], rate=222222.22/min 
[110000], rate=235714.29/min 
[120000], rate=211764.71/min 
[130000], rate=205263.16/min 
[140000], rate=200000.00/min 
[150000], rate=195652.17/min 
[160000], rate=195918.37/min 
[170000], rate=208163.27/min 
[180000], rate=211764.71/min 
[190000], rate=211111.11/min 
[200000], rate=222222.22/min 
[210000], rate=233333.33/min 
[220000], rate=231578.95/min 
[230000], rate=222580.65/min 
[240000], rate=211764.71/min 
[250000], rate=214285.71/min 
[260000], rate=213698.63/min 
[270000], rate=216000.00/min 
[280000], rate=207407.41/min 
[290000], rate=214814.81/min 
[300000], rate=219512.20/min 
[310000], rate=216279.07/min 
[320000], rate=218181.82/min 
[330000], rate=210638.30/min 
[340000], rate=210309.28/min 
[350000], rate=207920.79/min 
[360000], rate=209708.74/min 
[370000], rate=205555.56/min 
[380000], rate=209174.31/min 
[390000], rate=214678.90/min 
[400000], rate=212389.38/min 
[410000], rate=213913.04/min 
[420000], rate=192366.41/min 
[430000], rate=170860.93/min 
[440000], rate=153488.37/min 
[450000], rate=139896.37/min 
[460000], rate=130188.68/min 
[470000], rate=121030.04/min 
[480000], rate=113833.99/min 
[490000], rate=108088.24/min 
[500000], rate=103448.28/min 
[510000], rate=99350.65/min 
[520000], rate=95121.95/min 
[530000], rate=91907.51/min 
[540000], rate=89010.99/min 
[550000], rate=86842.11/min 
[560000], rate=84848.48/min 
[570000], rate=82608.70/min 
[580000], rate=80555.56/min 
[590000], rate=79017.86/min 
[600000], rate=77087.79/min 
[610000], rate=75463.92/min 
[620000], rate=74251.50/min 
[630000], rate=72972.97/min 
[640000], rate=71910.11/min 
[650000], rate=71167.88/min 
[660000], rate=70337.48/min 
[670000], rate=69430.05/min 
[680000], rate=68571.43/min 
[690000], rate=67757.77/min 
[700000], rate=67092.65/min 
[710000], rate=66562.50/min 
[720000], rate=65853.66/min 
[730000], rate=65178.57/min 
[740000], rate=64347.83/min 
[750000], rate=63739.38/min 
[760000], rate=63070.54/min 
[770000], rate=62516.91/min 
[780000], rate=61986.75/min 
[790000], rate=61558.44/min 
[800000], rate=61224.49/min 
[810000], rate=60902.26/min 
[820000], rate=60591.13/min 
[830000], rate=60363.64/min 
[840000], rate=60143.20/min 
[850000], rate=60000.00/min 
[860000], rate=59860.79/min 
[870000], rate=59862.39/min 
[880000], rate=59796.15/min 
[890000], rate=59664.80/min 
[900000], rate=59471.37/min 
[910000], rate=59347.83/min 
[920000], rate=59163.99/min 
[930000], rate=59047.62/min 
[940000], rate=58934.17/min 
[950000], rate=58823.53/min 
[960000], rate=58775.51/min 
[970000], rate=58728.56/min 
[980000], rate=58682.63/min 
[990000], rate=58579.88/min 
[1000000], rate=58536.59/min 
[1010000], rate=58494.21/min 
[1020000], rate=58174.90/min 
[1030000], rate=58028.17/min 
[1040000], rate=57884.97/min 
[1050000], rate=57798.17/min 
[1060000], rate=57713.25/min 
[1070000], rate=57578.48/min 
[1080000], rate=57446.81/min 
[1090000], rate=57318.14/min 
[1100000], rate=57291.67/min 
[1110000], rate=57265.69/min 
[1120000], rate=57191.49/min 
[1130000], rate=57166.95/min 
[1140000], rate=57142.86/min 
[1150000], rate=57024.79/min 
[1160000], rate=57002.46/min 
[1170000], rate=56980.52/min 
[1180000], rate=56867.47/min 
[1190000], rate=56801.91/min 
[1200000], rate=56692.91/min 
[1210000], rate=56542.06/min 
[1220000], rate=56394.45/min 
[1230000], rate=56292.91/min 
[1240000], rate=56278.37/min 
[1250000], rate=56348.61/min 
[1260000], rate=56417.91/min 
[1270000], rate=56486.29/min 
[1280000], rate=56553.76/min 
[1290000], rate=56537.62/min 
[1300000], rate=56603.77/min 
[1310000], rate=56628.24/min 
[1320000], rate=56692.91/min 
[1330000], rate=56797.15/min 
[1340000], rate=56859.97/min 
[1350000], rate=56962.03/min 
[1360000], rate=57062.94/min 
[1370000], rate=57202.51/min 
[1380000], rate=57380.46/min 
[1390000], rate=57517.24/min 
[1400000], rate=57652.71/min 
[1410000], rate=57786.89/min 
[1420000], rate=57959.18/min 
[1430000], rate=58169.49/min 
[1440000], rate=58378.38/min 
[1450000], rate=58585.86/min 
[1460000], rate=58595.32/min 
[1470000], rate=58604.65/min 
[1480000], rate=58613.86/min 
[1490000], rate=58661.42/min 
[1500000], rate=58708.41/min 
[1510000], rate=58754.86/min 
[1520000], rate=58800.77/min 
[1530000], rate=58883.90/min 
[1540000], rate=58853.50/min 
[1550000], rate=58935.36/min 
[1560000], rate=58979.21/min 
[1570000], rate=59059.56/min 
[1580000], rate=59139.11/min 
[1590000], rate=59181.14/min 
[1600000], rate=59259.26/min 
[1610000], rate=59336.61/min 
[1620000], rate=59449.54/min 
[1630000], rate=59561.51/min 
[1640000], rate=59672.53/min 
[1650000], rate=59782.61/min 
[1660000], rate=59963.88/min 
[1670000], rate=60071.94/min 
[1680000], rate=60179.10/min 
[1690000], rate=60321.24/min 
[1700000], rate=60462.36/min 
[1710000], rate=60459.63/min 
[1720000], rate=60527.86/min 
[1730000], rate=60630.84/min 
[1740000], rate=60697.67/min 
[1750000], rate=60799.07/min 
[1760000], rate=60899.65/min 
[1770000], rate=61034.48/min 
[1780000], rate=61203.44/min 
[1790000], rate=61231.47/min 
[1800000], rate=60982.50/min 
[1810000], rate=60772.24/min 
[1820000], rate=60532.15/min 
[1830000], rate=60296.54/min 
[1840000], rate=60097.99/min 
[1850000], rate=59838.27/min 
[1860000], rate=59775.04/min 
[1870000], rate=59522.55/min 
[1880000], rate=59274.83/min 
[1890000], rate=59124.09/min 
[1900000], rate=58884.30/min 
[1910000], rate=58648.93/min 
[1920000], rate=58506.86/min 
[1930000], rate=58308.16/min 
[1940000], rate=58112.83/min 
[1950000], rate=58006.94/min 
[1960000], rate=57874.02/min 
[1970000], rate=57658.54/min 
[1980000], rate=57474.60/min 
[1990000], rate=57293.67/min 
[2000000], rate=57197.33/min 
[2010000], rate=57102.27/min 
[2020000], rate=56928.14/min 
[2030000], rate=56836.21/min 
[2040000], rate=56771.80/min 
[2050000], rate=56603.77/min 
[2060000], rate=56438.36/min 
[2070000], rate=56428.90/min 
[2080000], rate=56470.59/min 
[2090000], rate=56511.94/min 
[2100000], rate=56578.36/min 
[2110000], rate=56543.10/min 
[2120000], rate=56483.13/min 
[2130000], rate=56448.76/min 
[2140000], rate=56291.10/min 
[2150000], rate=56160.21/min 
[2160000], rate=56055.36/min 
[2170000], rate=55927.84/min 
[2180000], rate=55849.70/min 
[2190000], rate=55772.50/min 
[2200000], rate=55719.71/min 
[2210000], rate=55737.70/min 
[2220000], rate=55732.22/min 
[2230000], rate=55750.00/min 
[2240000], rate=55767.63/min 
[2250000], rate=55762.08/min 
[2260000], rate=55710.76/min 
[2270000], rate=55705.52/min 
[2280000], rate=55723.01/min 
[2290000], rate=55695.18/min 
[2300000], rate=55690.07/min 
[2310000], rate=55729.79/min 
[2320000], rate=55791.58/min 
[2330000], rate=55875.30/min 
[2340000], rate=55891.72/min 
[2350000], rate=55974.59/min 
[2360000], rate=56057.01/min 
[2370000], rate=56138.97/min 
[2380000], rate=56220.47/min 
[2390000], rate=56323.64/min 
[2400000], rate=56382.15/min 
[2410000], rate=56440.28/min 
[2420000], rate=56410.26/min 
[2430000], rate=56336.94/min 
[2440000], rate=56221.20/min 
[2450000], rate=56042.70/min 
[2460000], rate=55909.09/min 
[2470000], rate=55819.21/min 
[2480000], rate=55751.22/min 
[2490000], rate=55725.48/min 
[2500000], rate=55679.29/min 
[2510000], rate=55633.54/min 
[2520000], rate=55608.68/min 
[2530000], rate=55604.40/min 
[2540000], rate=55559.61/min 
[2550000], rate=55515.24/min 
[2560000], rate=55491.33/min 
[2570000], rate=55487.59/min 
[2580000], rate=55444.13/min 
[2590000], rate=55401.07/min 
[2600000], rate=55378.06/min 
[2610000], rate=55316.14/min 
[2620000], rate=55293.70/min 
[2630000], rate=55290.82/min 
[2640000], rate=55249.39/min 
[2650000], rate=55227.51/min 
[2660000], rate=55244.03/min 
[2670000], rate=55222.34/min 
[2680000], rate=55219.78/min 
[2690000], rate=55273.97/min 
[2700000], rate=55308.98/min 
[2710000], rate=55343.77/min 
[2720000], rate=55397.15/min 
[2730000], rate=55450.24/min 
[2740000], rate=55521.78/min 
[2750000], rate=55555.56/min 
[2760000], rate=55626.47/min 
[2770000], rate=55697.05/min 
[2780000], rate=55748.66/min 
[2790000], rate=55837.22/min 
[2800000], rate=55906.82/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 18000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 10000000.00 reads per min processed...  
 7200000.00 reads per min processed...  
 7000000.00 reads per min processed...  
 6857142.86 reads per min processed...  
 6750000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5625000.00 reads per min processed...  
 5647058.82 reads per min processed...  
 5666666.67 reads per min processed...  
 5684210.53 reads per min processed...  
 5700000.00 reads per min processed...  
 5454545.45 reads per min processed...  
 5478260.87 reads per min processed...  
 5500000.00 reads per min processed...  
 5520000.00 reads per min processed...  
 5538461.54 reads per min processed...  
 5357142.86 reads per min processed...  
 5379310.34 reads per min processed...  
 5400000.00 reads per min processed...  
 5419354.84 reads per min processed...  
 5272727.27 reads per min processed...  
 5294117.65 reads per min processed...  
 5314285.71 reads per min processed...  
 5189189.19 reads per min processed...  
 5210526.32 reads per min processed...  
 5230769.23 reads per min processed...  
 5250000.00 reads per min processed...  
 5142857.14 reads per min processed...  
 5162790.70 reads per min processed...  
 5181818.18 reads per min processed...  
 5200000.00 reads per min processed...  
 5217391.30 reads per min processed...  
 5125000.00 reads per min processed...  
 5250000.00 reads per min processed...  
 5160000.00 reads per min processed...  
 5176470.59 reads per min processed...  
 5192307.69 reads per min processed...  
 5207547.17 reads per min processed...  
 5222222.22 reads per min processed...  
 5236363.64 reads per min processed...  
 5157894.74 reads per min processed...  
 5172413.79 reads per min processed...  
 5186440.68 reads per min processed...  
 5200000.00 reads per min processed...  
 5213114.75 reads per min processed...  
 5225806.45 reads per min processed...  
 5238095.24 reads per min processed...  
 5250000.00 reads per min processed...  
 5343750.00 reads per min processed...  
 5353846.15 reads per min processed...  
 5363636.36 reads per min processed...  
 5373134.33 reads per min processed...  
 5382352.94 reads per min processed...  
 5314285.71 reads per min processed...  
 5323943.66 reads per min processed...  
 5333333.33 reads per min processed...  
 5342465.75 reads per min processed...  
 5351351.35 reads per min processed...  
 5360000.00 reads per min processed...  
 5368421.05 reads per min processed...  
 5376623.38 reads per min processed...  
 5384615.38 reads per min processed...  
 5325000.00 reads per min processed...  
 5333333.33 reads per min processed...  
 5341463.41 reads per min processed...  
 5349397.59 reads per min processed...  
 5357142.86 reads per min processed...  
 5364705.88 reads per min processed...  
 5310344.83 reads per min processed...  
 5318181.82 reads per min processed...  
 5325842.70 reads per min processed...  
 5333333.33 reads per min processed...  
 5340659.34 reads per min processed...  
 5347826.09 reads per min processed...  
 5354838.71 reads per min processed...  
 5305263.16 reads per min processed...  
 5312500.00 reads per min processed...  
 5319587.63 reads per min processed...  
 5326530.61 reads per min processed...  
 5333333.33 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.x1oWKJ76RI/BVT_FFPE_TRNA_utn_09_A23WKFTLT4_3.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -388078.668002
EM: Round [1] log likelihood: -387885.008730
EM: Round [2] log likelihood: -387815.099901
EM: Round [3] log likelihood: -387782.133449
EM: Round [4] log likelihood: -387764.609128
EM: Round [5] log likelihood: -387754.645703
EM: Round [6] log likelihood: -387748.696089
EM: Round [7] log likelihood: -387744.981755
EM: Round [8] log likelihood: -387742.553811
EM: Round [9] log likelihood: -387740.888561
EM: Round [10] log likelihood: -387739.691139
EM: Round [11] log likelihood: -387738.792087
EM: Round [12] log likelihood: -387738.091370
EM: Round [13] log likelihood: -387737.527978
EM: Round [14] log likelihood: -387737.063357
EM: Round [15] log likelihood: -387736.672248
EM: Round [16] log likelihood: -387736.337514
EM: Round [17] log likelihood: -387736.047146
EM: Round [18] log likelihood: -387735.792475
EM: Round [19] log likelihood: -387735.567076
EM: Round [20] log likelihood: -387735.366068
EM: Round [21] log likelihood: -387735.185669
EM: Round [22] log likelihood: -387735.022889
EM: Round [23] log likelihood: -387734.875329
EM: Round [24] log likelihood: -387734.741029
EM: Round [25] log likelihood: -387734.618371
EM: Round [26] log likelihood: -387734.506001
EM: Round [27] log likelihood: -387734.402778
EM: Round [28] log likelihood: -387734.307724
EM: Round [29] log likelihood: -387734.220000
EM: Round [30] log likelihood: -387734.138881
EM: Round [31] log likelihood: -387734.063731
EM: Round [32] log likelihood: -387733.993993
EM: Round [33] log likelihood: -387733.929177
EM: Round [34] log likelihood: -387733.868848
EM: Round [35] log likelihood: -387733.812617
EM: Round [36] log likelihood: -387733.760139
EM: Round [37] log likelihood: -387733.711104
EM: Round [38] log likelihood: -387733.665231
EM: Round [39] log likelihood: -387733.622270
EM: Round [40] log likelihood: -387733.581991
EM: Round [41] log likelihood: -387733.544190
EM: Round [42] log likelihood: -387733.508677
EM: Round [43] log likelihood: -387733.475283
EM: Round [44] log likelihood: -387733.443850
EM: Round [45] log likelihood: -387733.414237
EM: Round [46] log likelihood: -387733.386313
EM: Round [47] log likelihood: -387733.359959
EM: Round [48] log likelihood: -387733.335065
EM: Round [49] log likelihood: -387733.311530
EM: Round [50] log likelihood: -387733.289260
EM: Round [51] log likelihood: -387733.268172
EM: Round [52] log likelihood: -387733.248185
EM: Round [53] log likelihood: -387733.229227
EM: Round [54] log likelihood: -387733.211230
EM: Round [55] log likelihood: -387733.194133
EM: Round [56] log likelihood: -387733.177878
EM: Round [57] log likelihood: -387733.162410
EM: Round [58] log likelihood: -387733.147682
EM: Round [59] log likelihood: -387733.133646
EM: Round [60] log likelihood: -387733.120260
EM: Round [61] log likelihood: -387733.107484
EM: Round [62] log likelihood: -387733.095282
EM: Round [63] log likelihood: -387733.083618
EM: Round [64] log likelihood: -387733.072462
EM: Round [65] log likelihood: -387733.061783
EM: Round [66] log likelihood: -387733.051553
EM: Round [67] log likelihood: -387733.041747
EM: Round [68] log likelihood: -387733.032340
EM: Round [69] log likelihood: -387733.023310
EM: Round [70] log likelihood: -387733.014635
EM: Round [71] log likelihood: -387733.006296
EM: Round [72] log likelihood: -387732.998274
EM: Round [73] log likelihood: -387732.990553
EM: Round [74] log likelihood: -387732.983115
EM: Round [75] log likelihood: -387732.975946
EM: Round [76] log likelihood: -387732.969032
EM: Round [77] log likelihood: -387732.962359
EM: Round [78] log likelihood: -387732.955914
EM: Round [79] log likelihood: -387732.949687
EM: Round [80] log likelihood: -387732.943665
EM: Round [81] log likelihood: -387732.937839
EM: Round [82] log likelihood: -387732.932199
EM: Round [83] log likelihood: -387732.926736
EM: Round [84] log likelihood: -387732.921441
EM: Round [85] log likelihood: -387732.916306
EM: Round [86] log likelihood: -387732.911323
EM: Round [87] log likelihood: -387732.906486
EM: Round [88] log likelihood: -387732.901787
EM: Round [89] log likelihood: -387732.897220
EM: Round [90] log likelihood: -387732.892779
EM: Round [91] log likelihood: -387732.888459
EM: Round [92] log likelihood: -387732.884254
EM: Round [93] log likelihood: -387732.880159
EM: Round [94] log likelihood: -387732.876169
EM: Round [95] log likelihood: -387732.872280
EM: Round [96] log likelihood: -387732.868488
EM: Round [97] log likelihood: -387732.864788
EM: Round [98] log likelihood: -387732.861176
EM: Round [99] log likelihood: -387732.857650
EM: Round [100] log likelihood: -387732.854205
EM: Round [101] log likelihood: -387732.850839
EM: Round [102] log likelihood: -387732.847547
EM: Round [103] log likelihood: -387732.844328
EM: Round [104] log likelihood: -387732.841179
EM: Round [105] log likelihood: -387732.838097
EM: Round [106] log likelihood: -387732.835079
EM: Round [107] log likelihood: -387732.832123
EM: Round [108] log likelihood: -387732.829228
EM: Round [109] log likelihood: -387732.826389
EM: Round [110] log likelihood: -387732.823607
EM: Round [111] log likelihood: -387732.820878
EM: Round [112] log likelihood: -387732.818201
EM: Round [113] log likelihood: -387732.815575
EM: Round [114] log likelihood: -387732.812997
EM: Round [115] log likelihood: -387732.810465
EM: Round [116] log likelihood: -387732.807979
EM: Round [117] log likelihood: -387732.805537
EM: Round [118] log likelihood: -387732.803137
EM: Round [119] log likelihood: -387732.800779
EM: Round [120] log likelihood: -387732.798460
EM: Round [121] log likelihood: -387732.796181
EM: Round [122] log likelihood: -387732.793938
EM: Round [123] log likelihood: -387732.791733
EM: Round [124] log likelihood: -387732.789562
EM: Round [125] log likelihood: -387732.787426
EM: Round [126] log likelihood: -387732.785324
EM: Round [127] log likelihood: -387732.783254
EM: Round [128] log likelihood: -387732.781216
EM: Round [129] log likelihood: -387732.779208
EM: Round [130] log likelihood: -387732.777230
EM: Round [131] log likelihood: -387732.775282
EM: Round [132] log likelihood: -387732.773362
EM: Round [133] log likelihood: -387732.771469
EM: Round [134] log likelihood: -387732.769604
EM: Round [135] log likelihood: -387732.767765
EM: Round [136] log likelihood: -387732.765952
EM: Round [137] log likelihood: -387732.764163
EM: Round [138] log likelihood: -387732.762400
EM: Round [139] log likelihood: -387732.760660
EM: Round [140] log likelihood: -387732.758943
EM: Round [141] log likelihood: -387732.757249
EM: Round [142] log likelihood: -387732.755578
EM: Round [143] log likelihood: -387732.753928
EM: Round [144] log likelihood: -387732.752300
EM: Round [145] log likelihood: -387732.750693
EM: Round [146] log likelihood: -387732.749106
EM: Round [147] log likelihood: -387732.747539
EM: Round [148] log likelihood: -387732.745992
EM: Round [149] log likelihood: -387732.744464
EM: Round [150] log likelihood: -387732.742955
EM: Round [151] log likelihood: -387732.741464
EM: Round [152] log likelihood: -387732.739991
EM: Round [153] log likelihood: -387732.738536
EM: Round [154] log likelihood: -387732.737099
EM: Round [155] log likelihood: -387732.735678
EM: Round [156] log likelihood: -387732.734274
EM: Round [157] log likelihood: -387732.732887
EM: Round [158] log likelihood: -387732.731516
EM: Round [159] log likelihood: -387732.730161
EM: Round [160] log likelihood: -387732.728821
EM: Round [161] log likelihood: -387732.727497
EM: Round [162] log likelihood: -387732.726187
EM: Round [163] log likelihood: -387732.724893
EM: Round [164] log likelihood: -387732.723613
EM: Round [165] log likelihood: -387732.722347
EM: Round [166] log likelihood: -387732.721095
EM: Round [167] log likelihood: -387732.719857
EM: Round [168] log likelihood: -387732.718633
EM: Round [169] log likelihood: -387732.717422
EM: Round [170] log likelihood: -387732.716224
EM: Round [171] log likelihood: -387732.715039
EM: Round [172] log likelihood: -387732.713867
EM: Round [173] log likelihood: -387732.712708
EM: Round [174] log likelihood: -387732.711561
EM: Round [175] log likelihood: -387732.710426
EM: Round [176] log likelihood: -387732.709303
EM: Round [177] log likelihood: -387732.708192
EM: Round [178] log likelihood: -387732.707092
EM: Round [179] log likelihood: -387732.706004
EM: Round [180] log likelihood: -387732.704928
EM: Round [181] log likelihood: -387732.703862
EM: Round [182] log likelihood: -387732.702808
EM: Round [183] log likelihood: -387732.701764
EM: Round [184] log likelihood: -387732.700731
EM: Round [185] log likelihood: -387732.699709
EM: Round [186] log likelihood: -387732.698697
EM: Round [187] log likelihood: -387732.697695
EM: Round [188] log likelihood: -387732.696703
EM: Round [189] log likelihood: -387732.695722
EM: Round [190] log likelihood: -387732.694750
EM: Round [191] log likelihood: -387732.693788
EM: Round [192] log likelihood: -387732.692835
EM: Round [193] log likelihood: -387732.691892
EM: Round [194] log likelihood: -387732.690959
EM: Round [195] log likelihood: -387732.690034
EM: Round [196] log likelihood: -387732.689119
EM: Round [197] log likelihood: -387732.688213
EM: Round [198] log likelihood: -387732.687316
EM: Round [199] log likelihood: -387732.686427
EM: Round [200] log likelihood: -387732.685547
EM: Round [201] log likelihood: -387732.684676
EM: Round [202] log likelihood: -387732.683813
EM: Round [203] log likelihood: -387732.682958
EM: Round [204] log likelihood: -387732.682112
EM: Round [205] log likelihood: -387732.681274
EM: Round [206] log likelihood: -387732.680444
EM: Round [207] log likelihood: -387732.679622
EM: Round [208] log likelihood: -387732.678808
EM: Round [209] log likelihood: -387732.678002
EM: Round [210] log likelihood: -387732.677203
EM: Round [211] log likelihood: -387732.676412
EM: Round [212] log likelihood: -387732.675628
EM: Round [213] log likelihood: -387732.674852
EM: Round [214] log likelihood: -387732.674083
EM: Round [215] log likelihood: -387732.673322
EM: Round [216] log likelihood: -387732.672568
EM: Round [217] log likelihood: -387732.671820
EM: Round [218] log likelihood: -387732.671080
EM: Round [219] log likelihood: -387732.670347
EM: Round [220] log likelihood: -387732.669621
EM: Round [221] log likelihood: -387732.668901
EM: Round [222] log likelihood: -387732.668188
EM: Round [223] log likelihood: -387732.667482
EM: Round [224] log likelihood: -387732.666782
EM: Round [225] log likelihood: -387732.666089
EM: Round [226] log likelihood: -387732.665402
EM: Round [227] log likelihood: -387732.664722
EM: Round [228] log likelihood: -387732.664048
EM: Round [229] log likelihood: -387732.663380
EM: Round [230] log likelihood: -387732.662719
EM: Round [231] log likelihood: -387732.662063
EM: Round [232] log likelihood: -387732.661414
EM: Round [233] log likelihood: -387732.660770
EM: Round [234] log likelihood: -387732.660132
EM: Round [235] log likelihood: -387732.659501
EM: Round [236] log likelihood: -387732.658874
EM: Round [237] log likelihood: -387732.658254
EM: Round [238] log likelihood: -387732.657640
EM: Round [239] log likelihood: -387732.657031
EM: Round [240] log likelihood: -387732.656427
EM: Round [241] log likelihood: -387732.655829
EM: Round [242] log likelihood: -387732.655237
EM: Round [243] log likelihood: -387732.654649
EM: Round [244] log likelihood: -387732.654068
EM: Round [245] log likelihood: -387732.653491
EM: Round [246] log likelihood: -387732.652920
EM: Round [247] log likelihood: -387732.652353
EM: Round [248] log likelihood: -387732.651792
EM: Round [249] log likelihood: -387732.651236
EM: Round [250] log likelihood: -387732.650685
EM: Round [251] log likelihood: -387732.650139
EM: Round [252] log likelihood: -387732.649598
EM: Round [253] log likelihood: -387732.649062
EM: Round [254] log likelihood: -387732.648531
EM: Round [255] log likelihood: -387732.648004
EM: Round [256] log likelihood: -387732.647482
EM: Round [257] log likelihood: -387732.646965
EM: Round [258] log likelihood: -387732.646452
EM: Round [259] log likelihood: -387732.645944
EM: Round [260] log likelihood: -387732.645441
EM: Round [261] log likelihood: -387732.644942
EM: Round [262] log likelihood: -387732.644447
EM: Round [263] log likelihood: -387732.643957
EM: Round [264] log likelihood: -387732.643471
EM: Round [265] log likelihood: -387732.642990
EM: Round [266] log likelihood: -387732.642512
EM: Round [267] log likelihood: -387732.642040
EM: Round [268] log likelihood: -387732.641571
EM: Round [269] log likelihood: -387732.641106
EM: Round [270] log likelihood: -387732.640646
EM: Round [271] log likelihood: -387732.640189
EM: Round [272] log likelihood: -387732.639737
EM: Round [273] log likelihood: -387732.639289
EM: Round [274] log likelihood: -387732.638844
EM: Round [275] log likelihood: -387732.638404
EM: Round [276] log likelihood: -387732.637968
EM: Round [277] log likelihood: -387732.637535
EM: Round [278] log likelihood: -387732.637106
EM: Round [279] log likelihood: -387732.636681
EM: Round [280] log likelihood: -387732.636260
EM: Round [281] log likelihood: -387732.635842
EM: Round [282] log likelihood: -387732.635428
EM: Round [283] log likelihood: -387732.635018
EM: Round [284] log likelihood: -387732.634611
EM: Round [285] log likelihood: -387732.634208
EM: Round [286] log likelihood: -387732.633808
EM: Round [287] log likelihood: -387732.633412
EM: Round [288] log likelihood: -387732.633020
EM: Round [289] log likelihood: -387732.632630
EM: Round [290] log likelihood: -387732.632245
EM: Round [291] log likelihood: -387732.631862
EM: Round [292] log likelihood: -387732.631483
EM: Round [293] log likelihood: -387732.631108
EM: Round [294] log likelihood: -387732.630735
EM: Round [295] log likelihood: -387732.630366
EM: Round [296] log likelihood: -387732.630000
EM: Round [297] log likelihood: -387732.629637
EM: Round [298] log likelihood: -387732.629278
EM: Round [299] log likelihood: -387732.628921
EM: Round [300] log likelihood: -387732.628568
EM: Round [301] log likelihood: -387732.628218
EM: Round [302] log likelihood: -387732.627871
EM: Round [303] log likelihood: -387732.627526
EM: Round [304] log likelihood: -387732.627185
EM: Round [305] log likelihood: -387732.626847
EM: Round [306] log likelihood: -387732.626512
EM: Round [307] log likelihood: -387732.626179
EM: Round [308] log likelihood: -387732.625850
EM: Round [309] log likelihood: -387732.625523
EM: Round [310] log likelihood: -387732.625199
EM: Round [311] log likelihood: -387732.624879
EM: Round [312] log likelihood: -387732.624560
EM: Round [313] log likelihood: -387732.624245
EM: Round [314] log likelihood: -387732.623932
EM: Round [315] log likelihood: -387732.623622
EM: Round [316] log likelihood: -387732.623315
EM: Round [317] log likelihood: -387732.623010
EM: Round [318] log likelihood: -387732.622708
EM: Round [319] log likelihood: -387732.622409
EM: Round [320] log likelihood: -387732.622112
EM: Round [321] log likelihood: -387732.621818
EM: Round [322] log likelihood: -387732.621526
EM: Round [323] log likelihood: -387732.621237
EM: Round [324] log likelihood: -387732.620950
EM: Round [325] log likelihood: -387732.620666
EM: Round [326] log likelihood: -387732.620385
EM: Round [327] log likelihood: -387732.620105
EM: Round [328] log likelihood: -387732.619828
EM: Round [329] log likelihood: -387732.619554
EM: Round [330] log likelihood: -387732.619282
EM: Round [331] log likelihood: -387732.619012
EM: Round [332] log likelihood: -387732.618744
EM: Round [333] log likelihood: -387732.618479
EM: Round [334] log likelihood: -387732.618216
EM: Round [335] log likelihood: -387732.617956
EM: Round [336] log likelihood: -387732.617697
EM: Round [337] log likelihood: -387732.617441
EM: Round [338] log likelihood: -387732.617187
EM: Round [339] log likelihood: -387732.616935
EM: Round [340] log likelihood: -387732.616686
EM: Round [341] log likelihood: -387732.616438
EM: Round [342] log likelihood: -387732.616193
EM: Round [343] log likelihood: -387732.615950
EM: Round [344] log likelihood: -387732.615709
EM: Round [345] log likelihood: -387732.615470
EM: Round [346] log likelihood: -387732.615233
EM: Round [347] log likelihood: -387732.614998
EM: Round [348] log likelihood: -387732.614765
EM: Round [349] log likelihood: -387732.614534
EM: Round [350] log likelihood: -387732.614305
EM: Round [351] log likelihood: -387732.614078
EM: Round [352] log likelihood: -387732.613852
EM: Round [353] log likelihood: -387732.613629
EM: Round [354] log likelihood: -387732.613408
EM: Round [355] log likelihood: -387732.613189
EM: Round [356] log likelihood: -387732.612971
EM: Round [357] log likelihood: -387732.612756
EM: Round [358] log likelihood: -387732.612542
EM: Round [359] log likelihood: -387732.612330
EM: Round [360] log likelihood: -387732.612120
EM: Round [361] log likelihood: -387732.611911
EM: Round [362] log likelihood: -387732.611705
EM: Round [363] log likelihood: -387732.611500
EM: Round [364] log likelihood: -387732.611297
EM: Round [365] log likelihood: -387732.611096
EM: Round [366] log likelihood: -387732.610896
EM: Round [367] log likelihood: -387732.610698
EM: Round [368] log likelihood: -387732.610502
EM: Round [369] log likelihood: -387732.610307
EM: Round [370] log likelihood: -387732.610115
EM: Round [371] log likelihood: -387732.609923
EM: Round [372] log likelihood: -387732.609734
EM: Round [373] log likelihood: -387732.609546
EM: Round [374] log likelihood: -387732.609359
EM: Round [375] log likelihood: -387732.609175
EM: Round [376] log likelihood: -387732.608991
EM: Round [377] log likelihood: -387732.608810
EM: Round [378] log likelihood: -387732.608630
EM: Round [379] log likelihood: -387732.608451
EM: Round [380] log likelihood: -387732.608274
EM: Round [381] log likelihood: -387732.608099
EM: Round [382] log likelihood: -387732.607924
EM: Round [383] log likelihood: -387732.607752
EM: Round [384] log likelihood: -387732.607581
EM: Round [385] log likelihood: -387732.607411
EM: Round [386] log likelihood: -387732.607243
EM: Round [387] log likelihood: -387732.607076
EM: Round [388] log likelihood: -387732.606911
EM: Round [389] log likelihood: -387732.606747
EM: Round [390] log likelihood: -387732.606584
EM: Round [391] log likelihood: -387732.606423
EM: Round [392] log likelihood: -387732.606263
EM: Round [393] log likelihood: -387732.606105
EM: Round [394] log likelihood: -387732.605948
EM: Round [395] log likelihood: -387732.605792
EM: Round [396] log likelihood: -387732.605638
EM: Round [397] log likelihood: -387732.605484
EM: Round [398] log likelihood: -387732.605333
EM: Round [399] log likelihood: -387732.605182
EM: Round [400] log likelihood: -387732.605033
EM: Round [401] log likelihood: -387732.604885
EM: Round [402] log likelihood: -387732.604738
EM: Round [403] log likelihood: -387732.604593
EM: Round [404] log likelihood: -387732.604448
EM: Round [405] log likelihood: -387732.604305
EM: Round [406] log likelihood: -387732.604163
EM: Round [407] log likelihood: -387732.604023
EM: Round [408] log likelihood: -387732.603883
EM: Round [409] log likelihood: -387732.603745
EM: Round [410] log likelihood: -387732.603608
EM: Round [411] log likelihood: -387732.603472
EM: Round [412] log likelihood: -387732.603337
EM: Round [413] log likelihood: -387732.603204
EM: Round [414] log likelihood: -387732.603071
EM: Round [415] log likelihood: -387732.602940
EM: Round [416] log likelihood: -387732.602810
EM: Round [417] log likelihood: -387732.602680
EM: Round [418] log likelihood: -387732.602552
EM: Round [419] log likelihood: -387732.602425
EM: Round [420] log likelihood: -387732.602299
EM: Round [421] log likelihood: -387732.602175
EM: Round [422] log likelihood: -387732.602051
EM: Round [423] log likelihood: -387732.601928
EM: Round [424] log likelihood: -387732.601806
EM: Round [425] log likelihood: -387732.601686
EM: Round [426] log likelihood: -387732.601566
EM: Round [427] log likelihood: -387732.601447
EM: Round [428] log likelihood: -387732.601330
EM: Round [429] log likelihood: -387732.601213
EM: Round [430] log likelihood: -387732.601097
EM: Round [431] log likelihood: -387732.600983
EM: Round [432] log likelihood: -387732.600869
EM: Round [433] log likelihood: -387732.600756
EM: Round [434] log likelihood: -387732.600644
EM: Round [435] log likelihood: -387732.600533
EM: Round [436] log likelihood: -387732.600424
EM: Round [437] log likelihood: -387732.600315
EM: Round [438] log likelihood: -387732.600206
EM: Round [439] log likelihood: -387732.600099
EM: Round [440] log likelihood: -387732.599993
EM: Round [441] log likelihood: -387732.599888
EM: Round [442] log likelihood: -387732.599783
EM: Round [443] log likelihood: -387732.599680
EM: Round [444] log likelihood: -387732.599577
EM: Round [445] log likelihood: -387732.599475
EM: Round [446] log likelihood: -387732.599374
EM: Round [447] log likelihood: -387732.599274
EM: Round [448] log likelihood: -387732.599175
EM: Stopping iterations at round 448 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -387761.720880
EM: Round [1] log likelihood: -387588.654186
EM: Round [2] log likelihood: -387528.789552
EM: Round [3] log likelihood: -387501.570576
EM: Round [4] log likelihood: -387487.604736
EM: Round [5] log likelihood: -387479.928474
EM: Round [6] log likelihood: -387475.466021
EM: Round [7] log likelihood: -387472.723447
EM: Round [8] log likelihood: -387470.940217
EM: Round [9] log likelihood: -387469.715780
EM: Round [10] log likelihood: -387468.831934
EM: Round [11] log likelihood: -387468.165439
EM: Round [12] log likelihood: -387467.643974
EM: Round [13] log likelihood: -387467.223414
EM: Round [14] log likelihood: -387466.875774
EM: Round [15] log likelihood: -387466.582632
EM: Round [16] log likelihood: -387466.331430
EM: Round [17] log likelihood: -387466.113326
EM: Round [18] log likelihood: -387465.921912
EM: Round [19] log likelihood: -387465.752423
EM: Round [20] log likelihood: -387465.601227
EM: Round [21] log likelihood: -387465.465503
EM: Round [22] log likelihood: -387465.343017
EM: Round [23] log likelihood: -387465.231970
EM: Round [24] log likelihood: -387465.130895
EM: Round [25] log likelihood: -387465.038576
EM: Round [26] log likelihood: -387464.953995
EM: Round [27] log likelihood: -387464.876293
EM: Round [28] log likelihood: -387464.804736
EM: Round [29] log likelihood: -387464.738691
EM: Round [30] log likelihood: -387464.677610
EM: Round [31] log likelihood: -387464.621017
EM: Round [32] log likelihood: -387464.568492
EM: Round [33] log likelihood: -387464.519664
EM: Round [34] log likelihood: -387464.474206
EM: Round [35] log likelihood: -387464.431825
EM: Round [36] log likelihood: -387464.392262
EM: Round [37] log likelihood: -387464.355281
EM: Round [38] log likelihood: -387464.320673
EM: Round [39] log likelihood: -387464.288248
EM: Round [40] log likelihood: -387464.257835
EM: Round [41] log likelihood: -387464.229277
EM: Round [42] log likelihood: -387464.202433
EM: Round [43] log likelihood: -387464.177175
EM: Round [44] log likelihood: -387464.153385
EM: Round [45] log likelihood: -387464.130956
EM: Round [46] log likelihood: -387464.109790
EM: Round [47] log likelihood: -387464.089796
EM: Round [48] log likelihood: -387464.070893
EM: Round [49] log likelihood: -387464.053005
EM: Round [50] log likelihood: -387464.036061
EM: Round [51] log likelihood: -387464.019998
EM: Round [52] log likelihood: -387464.004755
EM: Round [53] log likelihood: -387463.990280
EM: Round [54] log likelihood: -387463.976520
EM: Round [55] log likelihood: -387463.963429
EM: Round [56] log likelihood: -387463.950965
EM: Round [57] log likelihood: -387463.939086
EM: Round [58] log likelihood: -387463.927756
EM: Round [59] log likelihood: -387463.916940
EM: Round [60] log likelihood: -387463.906607
EM: Round [61] log likelihood: -387463.896727
EM: Round [62] log likelihood: -387463.887272
EM: Round [63] log likelihood: -387463.878216
EM: Round [64] log likelihood: -387463.869536
EM: Round [65] log likelihood: -387463.861209
EM: Round [66] log likelihood: -387463.853215
EM: Round [67] log likelihood: -387463.845535
EM: Round [68] log likelihood: -387463.838149
EM: Round [69] log likelihood: -387463.831043
EM: Round [70] log likelihood: -387463.824199
EM: Round [71] log likelihood: -387463.817604
EM: Round [72] log likelihood: -387463.811243
EM: Round [73] log likelihood: -387463.805104
EM: Round [74] log likelihood: -387463.799174
EM: Round [75] log likelihood: -387463.793443
EM: Round [76] log likelihood: -387463.787900
EM: Round [77] log likelihood: -387463.782536
EM: Round [78] log likelihood: -387463.777340
EM: Round [79] log likelihood: -387463.772305
EM: Round [80] log likelihood: -387463.767422
EM: Round [81] log likelihood: -387463.762684
EM: Round [82] log likelihood: -387463.758083
EM: Round [83] log likelihood: -387463.753613
EM: Round [84] log likelihood: -387463.749267
EM: Round [85] log likelihood: -387463.745040
EM: Round [86] log likelihood: -387463.740926
EM: Round [87] log likelihood: -387463.736919
EM: Round [88] log likelihood: -387463.733016
EM: Round [89] log likelihood: -387463.729210
EM: Round [90] log likelihood: -387463.725498
EM: Round [91] log likelihood: -387463.721876
EM: Round [92] log likelihood: -387463.718340
EM: Round [93] log likelihood: -387463.714885
EM: Round [94] log likelihood: -387463.711510
EM: Round [95] log likelihood: -387463.708209
EM: Round [96] log likelihood: -387463.704981
EM: Round [97] log likelihood: -387463.701822
EM: Round [98] log likelihood: -387463.698729
EM: Round [99] log likelihood: -387463.695700
EM: Round [100] log likelihood: -387463.692733
EM: Round [101] log likelihood: -387463.689825
EM: Round [102] log likelihood: -387463.686973
EM: Round [103] log likelihood: -387463.684177
EM: Round [104] log likelihood: -387463.681433
EM: Round [105] log likelihood: -387463.678740
EM: Round [106] log likelihood: -387463.676096
EM: Round [107] log likelihood: -387463.673499
EM: Round [108] log likelihood: -387463.670948
EM: Round [109] log likelihood: -387463.668441
EM: Round [110] log likelihood: -387463.665978
EM: Round [111] log likelihood: -387463.663555
EM: Round [112] log likelihood: -387463.661172
EM: Round [113] log likelihood: -387463.658828
EM: Round [114] log likelihood: -387463.656522
EM: Round [115] log likelihood: -387463.654252
EM: Round [116] log likelihood: -387463.652018
EM: Round [117] log likelihood: -387463.649817
EM: Round [118] log likelihood: -387463.647650
EM: Round [119] log likelihood: -387463.645516
EM: Round [120] log likelihood: -387463.643413
EM: Round [121] log likelihood: -387463.641340
EM: Round [122] log likelihood: -387463.639297
EM: Round [123] log likelihood: -387463.637283
EM: Round [124] log likelihood: -387463.635298
EM: Round [125] log likelihood: -387463.633340
EM: Round [126] log likelihood: -387463.631408
EM: Round [127] log likelihood: -387463.629503
EM: Round [128] log likelihood: -387463.627623
EM: Round [129] log likelihood: -387463.625768
EM: Round [130] log likelihood: -387463.623938
EM: Round [131] log likelihood: -387463.622131
EM: Round [132] log likelihood: -387463.620347
EM: Round [133] log likelihood: -387463.618586
EM: Round [134] log likelihood: -387463.616847
EM: Round [135] log likelihood: -387463.615130
EM: Round [136] log likelihood: -387463.613434
EM: Round [137] log likelihood: -387463.611759
EM: Round [138] log likelihood: -387463.610104
EM: Round [139] log likelihood: -387463.608470
EM: Round [140] log likelihood: -387463.606854
EM: Round [141] log likelihood: -387463.605258
EM: Round [142] log likelihood: -387463.603681
EM: Round [143] log likelihood: -387463.602122
EM: Round [144] log likelihood: -387463.600581
EM: Round [145] log likelihood: -387463.599058
EM: Round [146] log likelihood: -387463.597552
EM: Round [147] log likelihood: -387463.596063
EM: Round [148] log likelihood: -387463.594591
EM: Round [149] log likelihood: -387463.593136
EM: Round [150] log likelihood: -387463.591697
EM: Round [151] log likelihood: -387463.590273
EM: Round [152] log likelihood: -387463.588866
EM: Round [153] log likelihood: -387463.587474
EM: Round [154] log likelihood: -387463.586097
EM: Round [155] log likelihood: -387463.584734
EM: Round [156] log likelihood: -387463.583387
EM: Round [157] log likelihood: -387463.582054
EM: Round [158] log likelihood: -387463.580735
EM: Round [159] log likelihood: -387463.579430
EM: Round [160] log likelihood: -387463.578139
EM: Round [161] log likelihood: -387463.576862
EM: Round [162] log likelihood: -387463.575598
EM: Round [163] log likelihood: -387463.574347
EM: Round [164] log likelihood: -387463.573109
EM: Round [165] log likelihood: -387463.571884
EM: Round [166] log likelihood: -387463.570671
EM: Round [167] log likelihood: -387463.569471
EM: Round [168] log likelihood: -387463.568283
EM: Round [169] log likelihood: -387463.567108
EM: Round [170] log likelihood: -387463.565944
EM: Round [171] log likelihood: -387463.564792
EM: Round [172] log likelihood: -387463.563651
EM: Round [173] log likelihood: -387463.562522
EM: Round [174] log likelihood: -387463.561404
EM: Round [175] log likelihood: -387463.560298
EM: Round [176] log likelihood: -387463.559202
EM: Round [177] log likelihood: -387463.558118
EM: Round [178] log likelihood: -387463.557044
EM: Round [179] log likelihood: -387463.555980
EM: Round [180] log likelihood: -387463.554927
EM: Round [181] log likelihood: -387463.553885
EM: Round [182] log likelihood: -387463.552852
EM: Round [183] log likelihood: -387463.551830
EM: Round [184] log likelihood: -387463.550818
EM: Round [185] log likelihood: -387463.549815
EM: Round [186] log likelihood: -387463.548822
EM: Round [187] log likelihood: -387463.547839
EM: Round [188] log likelihood: -387463.546865
EM: Round [189] log likelihood: -387463.545901
EM: Round [190] log likelihood: -387463.544946
EM: Round [191] log likelihood: -387463.544000
EM: Round [192] log likelihood: -387463.543063
EM: Round [193] log likelihood: -387463.542135
EM: Round [194] log likelihood: -387463.541216
EM: Round [195] log likelihood: -387463.540305
EM: Round [196] log likelihood: -387463.539404
EM: Round [197] log likelihood: -387463.538510
EM: Round [198] log likelihood: -387463.537625
EM: Round [199] log likelihood: -387463.536749
EM: Round [200] log likelihood: -387463.535881
EM: Round [201] log likelihood: -387463.535021
EM: Round [202] log likelihood: -387463.534169
EM: Round [203] log likelihood: -387463.533325
EM: Round [204] log likelihood: -387463.532489
EM: Round [205] log likelihood: -387463.531661
EM: Round [206] log likelihood: -387463.530840
EM: Round [207] log likelihood: -387463.530027
EM: Round [208] log likelihood: -387463.529222
EM: Round [209] log likelihood: -387463.528424
EM: Round [210] log likelihood: -387463.527634
EM: Round [211] log likelihood: -387463.526850
EM: Round [212] log likelihood: -387463.526075
EM: Round [213] log likelihood: -387463.525306
EM: Round [214] log likelihood: -387463.524544
EM: Round [215] log likelihood: -387463.523790
EM: Round [216] log likelihood: -387463.523042
EM: Round [217] log likelihood: -387463.522301
EM: Round [218] log likelihood: -387463.521567
EM: Round [219] log likelihood: -387463.520840
EM: Round [220] log likelihood: -387463.520120
EM: Round [221] log likelihood: -387463.519406
EM: Round [222] log likelihood: -387463.518698
EM: Round [223] log likelihood: -387463.517997
EM: Round [224] log likelihood: -387463.517303
EM: Round [225] log likelihood: -387463.516614
EM: Round [226] log likelihood: -387463.515932
EM: Round [227] log likelihood: -387463.515257
EM: Round [228] log likelihood: -387463.514587
EM: Round [229] log likelihood: -387463.513924
EM: Round [230] log likelihood: -387463.513266
EM: Round [231] log likelihood: -387463.512614
EM: Round [232] log likelihood: -387463.511969
EM: Round [233] log likelihood: -387463.511329
EM: Round [234] log likelihood: -387463.510695
EM: Round [235] log likelihood: -387463.510067
EM: Round [236] log likelihood: -387463.509444
EM: Round [237] log likelihood: -387463.508827
EM: Round [238] log likelihood: -387463.508215
EM: Round [239] log likelihood: -387463.507609
EM: Round [240] log likelihood: -387463.507009
EM: Round [241] log likelihood: -387463.506414
EM: Round [242] log likelihood: -387463.505824
EM: Round [243] log likelihood: -387463.505239
EM: Round [244] log likelihood: -387463.504660
EM: Round [245] log likelihood: -387463.504086
EM: Round [246] log likelihood: -387463.503517
EM: Round [247] log likelihood: -387463.502953
EM: Round [248] log likelihood: -387463.502395
EM: Round [249] log likelihood: -387463.501841
EM: Round [250] log likelihood: -387463.501292
EM: Round [251] log likelihood: -387463.500748
EM: Round [252] log likelihood: -387463.500209
EM: Round [253] log likelihood: -387463.499674
EM: Round [254] log likelihood: -387463.499145
EM: Round [255] log likelihood: -387463.498620
EM: Round [256] log likelihood: -387463.498100
EM: Round [257] log likelihood: -387463.497584
EM: Round [258] log likelihood: -387463.497073
EM: Round [259] log likelihood: -387463.496567
EM: Round [260] log likelihood: -387463.496065
EM: Round [261] log likelihood: -387463.495567
EM: Round [262] log likelihood: -387463.495074
EM: Round [263] log likelihood: -387463.494585
EM: Round [264] log likelihood: -387463.494101
EM: Round [265] log likelihood: -387463.493621
EM: Round [266] log likelihood: -387463.493145
EM: Round [267] log likelihood: -387463.492673
EM: Round [268] log likelihood: -387463.492205
EM: Round [269] log likelihood: -387463.491742
EM: Round [270] log likelihood: -387463.491283
EM: Round [271] log likelihood: -387463.490827
EM: Round [272] log likelihood: -387463.490376
EM: Round [273] log likelihood: -387463.489929
EM: Round [274] log likelihood: -387463.489485
EM: Round [275] log likelihood: -387463.489046
EM: Round [276] log likelihood: -387463.488610
EM: Round [277] log likelihood: -387463.488179
EM: Round [278] log likelihood: -387463.487751
EM: Round [279] log likelihood: -387463.487326
EM: Round [280] log likelihood: -387463.486906
EM: Round [281] log likelihood: -387463.486489
EM: Round [282] log likelihood: -387463.486076
EM: Round [283] log likelihood: -387463.485666
EM: Round [284] log likelihood: -387463.485260
EM: Round [285] log likelihood: -387463.484858
EM: Round [286] log likelihood: -387463.484459
EM: Round [287] log likelihood: -387463.484063
EM: Round [288] log likelihood: -387463.483672
EM: Round [289] log likelihood: -387463.483283
EM: Round [290] log likelihood: -387463.482898
EM: Round [291] log likelihood: -387463.482516
EM: Round [292] log likelihood: -387463.482138
EM: Round [293] log likelihood: -387463.481762
EM: Round [294] log likelihood: -387463.481391
EM: Round [295] log likelihood: -387463.481022
EM: Round [296] log likelihood: -387463.480656
EM: Round [297] log likelihood: -387463.480294
EM: Round [298] log likelihood: -387463.479935
EM: Round [299] log likelihood: -387463.479579
EM: Round [300] log likelihood: -387463.479226
EM: Round [301] log likelihood: -387463.478876
EM: Round [302] log likelihood: -387463.478530
EM: Round [303] log likelihood: -387463.478186
EM: Round [304] log likelihood: -387463.477845
EM: Round [305] log likelihood: -387463.477507
EM: Round [306] log likelihood: -387463.477172
EM: Round [307] log likelihood: -387463.476840
EM: Round [308] log likelihood: -387463.476511
EM: Round [309] log likelihood: -387463.476185
EM: Round [310] log likelihood: -387463.475862
EM: Round [311] log likelihood: -387463.475541
EM: Round [312] log likelihood: -387463.475223
EM: Round [313] log likelihood: -387463.474908
EM: Round [314] log likelihood: -387463.474596
EM: Round [315] log likelihood: -387463.474286
EM: Round [316] log likelihood: -387463.473979
EM: Round [317] log likelihood: -387463.473675
EM: Round [318] log likelihood: -387463.473373
EM: Round [319] log likelihood: -387463.473074
EM: Round [320] log likelihood: -387463.472777
EM: Round [321] log likelihood: -387463.472483
EM: Round [322] log likelihood: -387463.472192
EM: Round [323] log likelihood: -387463.471903
EM: Round [324] log likelihood: -387463.471617
EM: Round [325] log likelihood: -387463.471333
EM: Round [326] log likelihood: -387463.471051
EM: Round [327] log likelihood: -387463.470772
EM: Round [328] log likelihood: -387463.470495
EM: Round [329] log likelihood: -387463.470221
EM: Round [330] log likelihood: -387463.469949
EM: Round [331] log likelihood: -387463.469680
EM: Round [332] log likelihood: -387463.469412
EM: Round [333] log likelihood: -387463.469147
EM: Round [334] log likelihood: -387463.468885
EM: Round [335] log likelihood: -387463.468624
EM: Round [336] log likelihood: -387463.468366
EM: Round [337] log likelihood: -387463.468110
EM: Round [338] log likelihood: -387463.467856
EM: Round [339] log likelihood: -387463.467605
EM: Round [340] log likelihood: -387463.467355
EM: Round [341] log likelihood: -387463.467108
EM: Round [342] log likelihood: -387463.466863
EM: Round [343] log likelihood: -387463.466620
EM: Round [344] log likelihood: -387463.466379
EM: Round [345] log likelihood: -387463.466140
EM: Round [346] log likelihood: -387463.465903
EM: Round [347] log likelihood: -387463.465668
EM: Round [348] log likelihood: -387463.465435
EM: Round [349] log likelihood: -387463.465204
EM: Round [350] log likelihood: -387463.464976
EM: Round [351] log likelihood: -387463.464749
EM: Round [352] log likelihood: -387463.464524
EM: Round [353] log likelihood: -387463.464301
EM: Round [354] log likelihood: -387463.464080
EM: Round [355] log likelihood: -387463.463860
EM: Round [356] log likelihood: -387463.463643
EM: Round [357] log likelihood: -387463.463428
EM: Round [358] log likelihood: -387463.463214
EM: Round [359] log likelihood: -387463.463002
EM: Round [360] log likelihood: -387463.462792
EM: Round [361] log likelihood: -387463.462584
EM: Round [362] log likelihood: -387463.462377
EM: Round [363] log likelihood: -387463.462173
EM: Round [364] log likelihood: -387463.461970
EM: Round [365] log likelihood: -387463.461769
EM: Round [366] log likelihood: -387463.461569
EM: Round [367] log likelihood: -387463.461371
EM: Round [368] log likelihood: -387463.461175
EM: Round [369] log likelihood: -387463.460981
EM: Round [370] log likelihood: -387463.460788
EM: Round [371] log likelihood: -387463.460597
EM: Round [372] log likelihood: -387463.460407
EM: Round [373] log likelihood: -387463.460220
EM: Round [374] log likelihood: -387463.460033
EM: Round [375] log likelihood: -387463.459849
EM: Round [376] log likelihood: -387463.459665
EM: Round [377] log likelihood: -387463.459484
EM: Round [378] log likelihood: -387463.459304
EM: Round [379] log likelihood: -387463.459125
EM: Round [380] log likelihood: -387463.458948
EM: Round [381] log likelihood: -387463.458773
EM: Round [382] log likelihood: -387463.458599
EM: Round [383] log likelihood: -387463.458427
EM: Round [384] log likelihood: -387463.458255
EM: Round [385] log likelihood: -387463.458086
EM: Round [386] log likelihood: -387463.457918
EM: Round [387] log likelihood: -387463.457751
EM: Round [388] log likelihood: -387463.457586
EM: Round [389] log likelihood: -387463.457422
EM: Round [390] log likelihood: -387463.457259
EM: Round [391] log likelihood: -387463.457098
EM: Round [392] log likelihood: -387463.456939
EM: Round [393] log likelihood: -387463.456780
EM: Round [394] log likelihood: -387463.456623
EM: Round [395] log likelihood: -387463.456468
EM: Round [396] log likelihood: -387463.456313
EM: Round [397] log likelihood: -387463.456160
EM: Round [398] log likelihood: -387463.456008
EM: Round [399] log likelihood: -387463.455858
EM: Round [400] log likelihood: -387463.455709
EM: Round [401] log likelihood: -387463.455561
EM: Round [402] log likelihood: -387463.455414
EM: Round [403] log likelihood: -387463.455269
EM: Round [404] log likelihood: -387463.455124
EM: Round [405] log likelihood: -387463.454981
EM: Round [406] log likelihood: -387463.454840
EM: Round [407] log likelihood: -387463.454699
EM: Round [408] log likelihood: -387463.454560
EM: Round [409] log likelihood: -387463.454422
EM: Round [410] log likelihood: -387463.454285
EM: Round [411] log likelihood: -387463.454149
EM: Round [412] log likelihood: -387463.454014
EM: Round [413] log likelihood: -387463.453880
EM: Round [414] log likelihood: -387463.453748
EM: Round [415] log likelihood: -387463.453617
EM: Round [416] log likelihood: -387463.453486
EM: Round [417] log likelihood: -387463.453357
EM: Round [418] log likelihood: -387463.453229
EM: Round [419] log likelihood: -387463.453102
EM: Round [420] log likelihood: -387463.452976
EM: Round [421] log likelihood: -387463.452852
EM: Round [422] log likelihood: -387463.452728
EM: Round [423] log likelihood: -387463.452605
EM: Round [424] log likelihood: -387463.452484
EM: Round [425] log likelihood: -387463.452363
EM: Round [426] log likelihood: -387463.452243
EM: Round [427] log likelihood: -387463.452125
EM: Round [428] log likelihood: -387463.452007
EM: Round [429] log likelihood: -387463.451891
EM: Round [430] log likelihood: -387463.451775
EM: Round [431] log likelihood: -387463.451660
EM: Round [432] log likelihood: -387463.451547
EM: Round [433] log likelihood: -387463.451434
EM: Round [434] log likelihood: -387463.451322
EM: Round [435] log likelihood: -387463.451211
EM: Round [436] log likelihood: -387463.451102
EM: Round [437] log likelihood: -387463.450993
EM: Round [438] log likelihood: -387463.450885
EM: Round [439] log likelihood: -387463.450777
EM: Round [440] log likelihood: -387463.450671
EM: Round [441] log likelihood: -387463.450566
EM: Round [442] log likelihood: -387463.450461
EM: Round [443] log likelihood: -387463.450358
EM: Round [444] log likelihood: -387463.450255
EM: Round [445] log likelihood: -387463.450153
EM: Round [446] log likelihood: -387463.450052
EM: Round [447] log likelihood: -387463.449952
EM: Round [448] log likelihood: -387463.449853
EM: Stopping iterations at round 448 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 294215781 > /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir > /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir --annotate /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir
-done, see /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1877, filtered: 12986)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.x1oWKJ76RI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.x1oWKJ76RI/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000288039.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000230239.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000231755.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000287721.1]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000230773.9]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000231755.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234064.1]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000225178.5]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000235325.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000219507.4]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000246695.8]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000268081.1]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000228812.7]
WARNING, no entry stored in dbm for [ENSG00000236753.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000224008.1]
WARNING, no entry stored in dbm for [ENSG00000251003.9]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000256343.8]
WARNING, no entry stored in dbm for [ENSG00000267524.1]
WARNING, no entry stored in dbm for [ENSG00000224261.2]
WARNING, no entry stored in dbm for [ENSG00000239671.1]
WARNING, no entry stored in dbm for [ENSG00000240870.2]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000241228.1]
WARNING, no entry stored in dbm for [ENSG00000243007.1]
WARNING, no entry stored in dbm for [ENSG00000236548.2]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000264618.2]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000242559.3]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000256875.2]
WARNING, no entry stored in dbm for [ENSG00000236741.4]
WARNING, no entry stored in dbm for [ENSG00000286430.1]
WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000227398.4]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000214548.18]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000225064.1]
WARNING, no entry stored in dbm for [ENSG00000255769.7]
WARNING, no entry stored in dbm for [ENSG00000235583.2]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000281491.1]
WARNING, no entry stored in dbm for [ENSG00000256035.1]
WARNING, no entry stored in dbm for [ENSG00000230551.4]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000230175.1]
WARNING, no entry stored in dbm for [ENSG00000258656.1]
WARNING, no entry stored in dbm for [ENSG00000214195.4]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000223612.3]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000205959.4]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000229821.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000228010.6]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000268416.1]
WARNING, no entry stored in dbm for [ENSG00000238152.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000248551.1]
WARNING, no entry stored in dbm for [ENSG00000261239.6]
WARNING, no entry stored in dbm for [ENSG00000226055.2]
WARNING, no entry stored in dbm for [ENSG00000235197.1]
WARNING, no entry stored in dbm for [ENSG00000246067.8]
WARNING, no entry stored in dbm for [ENSG00000197083.11]
WARNING, no entry stored in dbm for [ENSG00000258725.2]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000237747.1]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000226358.1]
WARNING, no entry stored in dbm for [ENSG00000261614.1]
WARNING, no entry stored in dbm for [ENSG00000213539.4]
WARNING, no entry stored in dbm for [ENSG00000275131.3]
WARNING, no entry stored in dbm for [ENSG00000255282.6]
WARNING, no entry stored in dbm for [ENSG00000275656.1]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000279943.1]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000232354.8]
WARNING, no entry stored in dbm for [ENSG00000254584.2]
WARNING, no entry stored in dbm for [ENSG00000231290.6]
WARNING, no entry stored in dbm for [ENSG00000255136.3]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000220804.8]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000227391.1]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000264113.2]
WARNING, no entry stored in dbm for [ENSG00000256817.1]
WARNING, no entry stored in dbm for [ENSG00000214108.4]
WARNING, no entry stored in dbm for [ENSG00000257453.1]
WARNING, no entry stored in dbm for [ENSG00000259770.2]
WARNING, no entry stored in dbm for [ENSG00000224072.1]
WARNING, no entry stored in dbm for [ENSG00000251441.3]
WARNING, no entry stored in dbm for [ENSG00000234967.2]
WARNING, no entry stored in dbm for [ENSG00000287383.1]
WARNING, no entry stored in dbm for [ENSG00000234931.1]
WARNING, no entry stored in dbm for [ENSG00000254810.1]
WARNING, no entry stored in dbm for [ENSG00000232952.1]
WARNING, no entry stored in dbm for [ENSG00000266733.7]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000267432.6]
WARNING, no entry stored in dbm for [ENSG00000246095.2]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000246067.8]
WARNING, no entry stored in dbm for [ENSG00000263266.2]
WARNING, no entry stored in dbm for [ENSG00000203875.13]
WARNING, no entry stored in dbm for [ENSG00000249345.8]
WARNING, no entry stored in dbm for [ENSG00000280145.3]
WARNING, no entry stored in dbm for [ENSG00000159712.10]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000233452.7]
WARNING, no entry stored in dbm for [ENSG00000273199.1]
WARNING, no entry stored in dbm for [ENSG00000284951.1]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000259821.1]
WARNING, no entry stored in dbm for [ENSG00000223923.2]
WARNING, no entry stored in dbm for [ENSG00000213234.4]
WARNING, no entry stored in dbm for [ENSG00000258230.2]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000286048.1]
WARNING, no entry stored in dbm for [ENSG00000236911.6]
WARNING, no entry stored in dbm for [ENSG00000223612.3]
WARNING, no entry stored in dbm for [ENSG00000278954.1]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000203875.13]
WARNING, no entry stored in dbm for [ENSG00000267321.3]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000260260.1]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000286953.1]
WARNING, no entry stored in dbm for [ENSG00000253256.1]
WARNING, no entry stored in dbm for [ENSG00000241313.3]
WARNING, no entry stored in dbm for [ENSG00000259863.1]
WARNING, no entry stored in dbm for [ENSG00000241889.1]
WARNING, no entry stored in dbm for [ENSG00000187483.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000248445.5]
WARNING, no entry stored in dbm for [ENSG00000277053.4]
WARNING, no entry stored in dbm for [ENSG00000213693.4]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000273344.1]
WARNING, no entry stored in dbm for [ENSG00000225953.3]
WARNING, no entry stored in dbm for [ENSG00000249096.7]
WARNING, no entry stored in dbm for [ENSG00000227392.2]
WARNING, no entry stored in dbm for [ENSG00000270954.1]
WARNING, no entry stored in dbm for [ENSG00000224439.2]
WARNING, no entry stored in dbm for [ENSG00000244260.2]
WARNING, no entry stored in dbm for [ENSG00000214485.6]
WARNING, no entry stored in dbm for [ENSG00000224476.3]
WARNING, no entry stored in dbm for [ENSG00000257074.3]
WARNING, no entry stored in dbm for [ENSG00000241030.1]
WARNING, no entry stored in dbm for [ENSG00000241081.1]
WARNING, no entry stored in dbm for [ENSG00000225483.1]
WARNING, no entry stored in dbm for [ENSG00000241081.1]
WARNING, no entry stored in dbm for [ENSG00000230171.1]
WARNING, no entry stored in dbm for [ENSG00000276027.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000199839.1]
WARNING, no entry stored in dbm for [ENSG00000239888.3]
WARNING, no entry stored in dbm for [ENSG00000264322.2]
WARNING, no entry stored in dbm for [ENSG00000244389.3]
WARNING, no entry stored in dbm for [ENSG00000263988.2]
WARNING, no entry stored in dbm for [ENSG00000243424.2]
WARNING, no entry stored in dbm for [ENSG00000199719.1]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000286661.1]
WARNING, no entry stored in dbm for [ENSG00000227444.1]
WARNING, no entry stored in dbm for [ENSG00000213652.3]
WARNING, no entry stored in dbm for [ENSG00000236948.2]
WARNING, no entry stored in dbm for [ENSG00000236741.4]
WARNING, no entry stored in dbm for [ENSG00000285582.1]
WARNING, no entry stored in dbm for [ENSG00000228780.2]
WARNING, no entry stored in dbm for [ENSG00000260930.2]
WARNING, no entry stored in dbm for [ENSG00000267122.1]
WARNING, no entry stored in dbm for [ENSG00000250337.7]
WARNING, no entry stored in dbm for [ENSG00000250337.7]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000267313.7]
WARNING, no entry stored in dbm for [ENSG00000215458.8]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000282961.1]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000067601.8]
WARNING, no entry stored in dbm for [ENSG00000254734.1]
WARNING, no entry stored in dbm for [ENSG00000206635.1]
WARNING, no entry stored in dbm for [ENSG00000254266.6]
WARNING, no entry stored in dbm for [ENSG00000287644.1]
WARNING, no entry stored in dbm for [ENSG00000248271.1]
WARNING, no entry stored in dbm for [ENSG00000270392.2]
WARNING, no entry stored in dbm for [ENSG00000258779.8]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000244171.4]
WARNING, no entry stored in dbm for [ENSG00000281880.2]
WARNING, no entry stored in dbm for [ENSG00000184669.9]
WARNING, no entry stored in dbm for [ENSG00000227096.1]
WARNING, no entry stored in dbm for [ENSG00000227023.1]
WARNING, no entry stored in dbm for [ENSG00000257976.1]
WARNING, no entry stored in dbm for [ENSG00000287262.1]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000229338.1]
WARNING, no entry stored in dbm for [ENSG00000224443.1]
WARNING, no entry stored in dbm for [ENSG00000225637.1]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000233098.9]
WARNING, no entry stored in dbm for [ENSG00000236504.2]
WARNING, no entry stored in dbm for [ENSG00000223663.2]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000225619.1]
WARNING, no entry stored in dbm for [ENSG00000236741.4]
WARNING, no entry stored in dbm for [ENSG00000231898.9]
WARNING, no entry stored in dbm for [ENSG00000207756.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000214195.4]
WARNING, no entry stored in dbm for [ENSG00000235989.4]
WARNING, no entry stored in dbm for [ENSG00000241529.3]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000171889.5]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000250328.6]
WARNING, no entry stored in dbm for [ENSG00000230569.1]
WARNING, no entry stored in dbm for [ENSG00000176593.8]
WARNING, no entry stored in dbm for [ENSG00000261220.2]
WARNING, no entry stored in dbm for [ENSG00000272282.1]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000265000.1]
WARNING, no entry stored in dbm for [ENSG00000197291.9]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000288245.1]
WARNING, no entry stored in dbm for [ENSG00000227917.3]
WARNING, no entry stored in dbm for [ENSG00000228536.3]
WARNING, no entry stored in dbm for [ENSG00000231969.2]
WARNING, no entry stored in dbm for [ENSG00000093100.13]
WARNING, no entry stored in dbm for [ENSG00000266504.1]
WARNING, no entry stored in dbm for [ENSG00000255332.8]
WARNING, no entry stored in dbm for [ENSG00000254872.3]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000251129.2]
WARNING, no entry stored in dbm for [ENSG00000258912.2]
WARNING, no entry stored in dbm for [ENSG00000251026.2]
WARNING, no entry stored in dbm for [ENSG00000260186.5]
WARNING, no entry stored in dbm for [ENSG00000261637.3]
WARNING, no entry stored in dbm for [ENSG00000279727.1]
WARNING, no entry stored in dbm for [ENSG00000204277.1]
WARNING, no entry stored in dbm for [ENSG00000204460.3]
WARNING, no entry stored in dbm for [ENSG00000231437.3]
WARNING, no entry stored in dbm for [ENSG00000260338.2]
WARNING, no entry stored in dbm for [ENSG00000231422.2]
WARNING, no entry stored in dbm for [ENSG00000254562.7]
WARNING, no entry stored in dbm for [ENSG00000225321.2]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000251396.7]
WARNING, no entry stored in dbm for [ENSG00000249601.2]
WARNING, no entry stored in dbm for [ENSG00000228414.7]
WARNING, no entry stored in dbm for [ENSG00000242641.6]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000229404.6]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000267886.1]
WARNING, no entry stored in dbm for [ENSG00000227036.8]
WARNING, no entry stored in dbm for [ENSG00000251372.6]
WARNING, no entry stored in dbm for [ENSG00000178977.3]
WARNING, no entry stored in dbm for [ENSG00000180422.3]
WARNING, no entry stored in dbm for [ENSG00000224730.1]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000187686.4]
WARNING, no entry stored in dbm for [ENSG00000213601.3]
WARNING, no entry stored in dbm for [ENSG00000287432.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000286808.1]
WARNING, no entry stored in dbm for [ENSG00000272556.2]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000243548.3]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000249934.2]
WARNING, no entry stored in dbm for [ENSG00000265489.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000232133.1]
WARNING, no entry stored in dbm for [ENSG00000236700.6]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000259895.1]
WARNING, no entry stored in dbm for [ENSG00000258352.1]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000259746.1]
WARNING, no entry stored in dbm for [ENSG00000215895.4]
WARNING, no entry stored in dbm for [ENSG00000228623.6]
WARNING, no entry stored in dbm for [ENSG00000240990.10]
WARNING, no entry stored in dbm for [ENSG00000213305.3]
WARNING, no entry stored in dbm for [ENSG00000215054.3]
WARNING, no entry stored in dbm for [ENSG00000261620.1]
WARNING, no entry stored in dbm for [ENSG00000227259.2]
WARNING, no entry stored in dbm for [ENSG00000238249.2]
WARNING, no entry stored in dbm for [ENSG00000236086.4]
WARNING, no entry stored in dbm for [ENSG00000124097.7]
WARNING, no entry stored in dbm for [ENSG00000253770.1]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000230313.1]
WARNING, no entry stored in dbm for [ENSG00000257287.1]
WARNING, no entry stored in dbm for [ENSG00000178458.5]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000213440.2]
WARNING, no entry stored in dbm for [ENSG00000223383.1]
WARNING, no entry stored in dbm for [ENSG00000235071.1]
WARNING, no entry stored in dbm for [ENSG00000230847.4]
WARNING, no entry stored in dbm for [ENSG00000226258.7]
WARNING, no entry stored in dbm for [ENSG00000260852.1]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000239545.3]
WARNING, no entry stored in dbm for [ENSG00000251209.9]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000228876.4]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000213866.3]
WARNING, no entry stored in dbm for [ENSG00000260266.1]
WARNING, no entry stored in dbm for [ENSG00000251463.2]
WARNING, no entry stored in dbm for [ENSG00000239617.1]
WARNING, no entry stored in dbm for [ENSG00000229931.1]
WARNING, no entry stored in dbm for [ENSG00000226803.9]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000283795.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000178162.8]
WARNING, no entry stored in dbm for [ENSG00000184608.9]
WARNING, no entry stored in dbm for [ENSG00000274015.2]
WARNING, no entry stored in dbm for [ENSG00000237945.7]
WARNING, no entry stored in dbm for [ENSG00000240401.9]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000251027.2]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000224963.3]
WARNING, no entry stored in dbm for [ENSG00000184029.9]
WARNING, no entry stored in dbm for [ENSG00000215105.4]
WARNING, no entry stored in dbm for [ENSG00000184029.9]
WARNING, no entry stored in dbm for [ENSG00000248079.3]
WARNING, no entry stored in dbm for [ENSG00000254793.1]
WARNING, no entry stored in dbm for [ENSG00000213421.4]
WARNING, no entry stored in dbm for [ENSG00000268505.1]
WARNING, no entry stored in dbm for [ENSG00000226029.1]
WARNING, no entry stored in dbm for [ENSG00000227375.6]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000225742.6]
WARNING, no entry stored in dbm for [ENSG00000255760.2]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000233448.2]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000187893.10]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000284747.1]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000258551.6]
WARNING, no entry stored in dbm for [ENSG00000213148.3]
WARNING, no entry stored in dbm for [ENSG00000228414.7]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000259293.1]
WARNING, no entry stored in dbm for [ENSG00000228695.10]
WARNING, no entry stored in dbm for [ENSG00000260807.7]
WARNING, no entry stored in dbm for [ENSG00000227827.3]
WARNING, no entry stored in dbm for [ENSG00000178734.5]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000238184.1]
WARNING, no entry stored in dbm for [ENSG00000279300.1]
WARNING, no entry stored in dbm for [ENSG00000020219.9]
WARNING, no entry stored in dbm for [ENSG00000173295.8]
WARNING, no entry stored in dbm for [ENSG00000248515.2]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000253549.6]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000270453.1]
WARNING, no entry stored in dbm for [ENSG00000181577.16]
WARNING, no entry stored in dbm for [ENSG00000230849.2]
WARNING, no entry stored in dbm for [ENSG00000224635.2]
WARNING, no entry stored in dbm for [ENSG00000179428.2]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000237480.3]
WARNING, no entry stored in dbm for [ENSG00000235510.1]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000232732.11]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000228401.5]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000270702.1]
WARNING, no entry stored in dbm for [ENSG00000185641.6]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000256843.1]
WARNING, no entry stored in dbm for [ENSG00000227948.4]
WARNING, no entry stored in dbm for [ENSG00000227948.4]
WARNING, no entry stored in dbm for [ENSG00000288045.1]
WARNING, no entry stored in dbm for [ENSG00000283805.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000239617.1]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000254662.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000234353.2]
WARNING, no entry stored in dbm for [ENSG00000234509.1]
WARNING, no entry stored in dbm for [ENSG00000169668.11]
WARNING, no entry stored in dbm for [ENSG00000231991.4]
WARNING, no entry stored in dbm for [ENSG00000255311.5]
WARNING, no entry stored in dbm for [ENSG00000261019.1]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000239390.3]
WARNING, no entry stored in dbm for [ENSG00000244264.3]
WARNING, no entry stored in dbm for [ENSG00000244230.3]
WARNING, no entry stored in dbm for [ENSG00000267325.2]
WARNING, no entry stored in dbm for [ENSG00000215030.5]
WARNING, no entry stored in dbm for [ENSG00000250575.1]
WARNING, no entry stored in dbm for [ENSG00000286378.1]
WARNING, no entry stored in dbm for [ENSG00000232576.2]
WARNING, no entry stored in dbm for [ENSG00000244932.2]
WARNING, no entry stored in dbm for [ENSG00000229657.2]
WARNING, no entry stored in dbm for [ENSG00000136149.6]
WARNING, no entry stored in dbm for [ENSG00000272141.1]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000288583.1]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000224307.2]
WARNING, no entry stored in dbm for [ENSG00000285672.1]
WARNING, no entry stored in dbm for [ENSG00000247970.2]
WARNING, no entry stored in dbm for [ENSG00000228053.1]
WARNING, no entry stored in dbm for [ENSG00000229870.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000233183.3]
WARNING, no entry stored in dbm for [ENSG00000287708.1]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000225945.1]
WARNING, no entry stored in dbm for [ENSG00000237686.7]
WARNING, no entry stored in dbm for [ENSG00000231881.2]
WARNING, no entry stored in dbm for [ENSG00000279616.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000286381.1]
WARNING, no entry stored in dbm for [ENSG00000285875.1]
WARNING, no entry stored in dbm for [ENSG00000261641.2]
WARNING, no entry stored in dbm for [ENSG00000260401.1]
WARNING, no entry stored in dbm for [ENSG00000227775.3]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000246145.1]
WARNING, no entry stored in dbm for [ENSG00000280604.1]
WARNING, no entry stored in dbm for [ENSG00000235277.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000248692.5]
WARNING, no entry stored in dbm for [ENSG00000250492.1]
WARNING, no entry stored in dbm for [ENSG00000283566.2]
WARNING, no entry stored in dbm for [ENSG00000223612.3]
WARNING, no entry stored in dbm for [ENSG00000281741.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000232176.1]
WARNING, no entry stored in dbm for [ENSG00000248608.2]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000260084.1]
WARNING, no entry stored in dbm for [ENSG00000260526.1]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000253836.1]
WARNING, no entry stored in dbm for [ENSG00000237810.3]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000273230.1]
WARNING, no entry stored in dbm for [ENSG00000259756.1]
WARNING, no entry stored in dbm for [ENSG00000287517.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000284610.1]
WARNING, no entry stored in dbm for [ENSG00000284673.1]
WARNING, no entry stored in dbm for [ENSG00000287860.1]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000263958.2]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000283392.1]
WARNING, no entry stored in dbm for [ENSG00000253363.7]
WARNING, no entry stored in dbm for [ENSG00000260392.6]
WARNING, no entry stored in dbm for [ENSG00000279259.1]
WARNING, no entry stored in dbm for [ENSG00000262580.5]
WARNING, no entry stored in dbm for [ENSG00000256969.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000240207.7]
WARNING, no entry stored in dbm for [ENSG00000250321.1]
WARNING, no entry stored in dbm for [ENSG00000248459.1]
WARNING, no entry stored in dbm for [ENSG00000286539.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000230936.1]
WARNING, no entry stored in dbm for [ENSG00000198580.7]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000287130.1]
WARNING, no entry stored in dbm for [ENSG00000279605.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000261616.1]
WARNING, no entry stored in dbm for [ENSG00000270419.1]
WARNING, no entry stored in dbm for [ENSG00000223727.6]
WARNING, no entry stored in dbm for [ENSG00000260267.1]
WARNING, no entry stored in dbm for [ENSG00000259862.1]
WARNING, no entry stored in dbm for [ENSG00000248515.2]
WARNING, no entry stored in dbm for [ENSG00000248515.2]
WARNING, no entry stored in dbm for [ENSG00000271696.1]
WARNING, no entry stored in dbm for [ENSG00000233862.7]
WARNING, no entry stored in dbm for [ENSG00000093100.13]
WARNING, no entry stored in dbm for [ENSG00000250073.3]
WARNING, no entry stored in dbm for [ENSG00000230690.2]
WARNING, no entry stored in dbm for [ENSG00000271018.1]
WARNING, no entry stored in dbm for [ENSG00000224237.1]
WARNING, no entry stored in dbm for [ENSG00000240401.9]
WARNING, no entry stored in dbm for [ENSG00000260115.1]
WARNING, no entry stored in dbm for [ENSG00000261542.1]
WARNING, no entry stored in dbm for [ENSG00000266978.1]
WARNING, no entry stored in dbm for [ENSG00000267220.1]
WARNING, no entry stored in dbm for [ENSG00000263547.2]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000235253.1]
WARNING, no entry stored in dbm for [ENSG00000227270.1]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000273297.2]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000249738.10]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000286678.1]
WARNING, no entry stored in dbm for [ENSG00000269807.1]
WARNING, no entry stored in dbm for [ENSG00000253405.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000242593.7]
WARNING, no entry stored in dbm for [ENSG00000287629.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000261996.1]
WARNING, no entry stored in dbm for [ENSG00000279159.1]
WARNING, no entry stored in dbm for [ENSG00000164669.13]
WARNING, no entry stored in dbm for [ENSG00000250420.8]
WARNING, no entry stored in dbm for [ENSG00000218561.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000237296.9]


	* STAR-Fusion complete.  See output: /tmp/nxf.x1oWKJ76RI/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)