File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/be1bc695a2d3bbaa4b3a862b30fbe0/.command.err
Size
570 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3)
Attempt

Content

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Processing Kallisto file: BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3/abundance.h5
Successfully converted BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3/abundance.h5 to BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3_kallisto_mqc.tsv
  Sample: BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3
  Mean Fragment Length: 119.1 bp
  Median Fragment Length: 113.0 bp
  pct_mito_est_counts: 0.003%
  pct_ribo_est_counts: 0.891%
  pct_hk_est_counts: 0.498%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.007%
  pct_ribo_tpm: 2.751%
  pct_hk_tpm: 0.767%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.079%