AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 337
Pass (FILTER=PASS): 61 (18.1%)
Fail (FILTER=FAIL): 276 (81.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 50
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 36
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 27
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 27
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 26
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 25
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high): 7
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
total_reads_below_min(7.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 4
Breakdown by confidence:
high: 61 pass, 20 fail (total: 81)
low: 0 pass, 109 fail (total: 109)
medium: 0 pass, 147 fail (total: 147)
Arriba filter: 337 rows -> 61 PASS; wrote BVT_FFPE_TRNA_bst_05_A23WKFTLT4_2.arriba.fusions.filtered.tsv and BVT_FFPE_TRNA_bst_05_A23WKFTLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: BVT_FFPE_TRNA_bst_05_A23WKFTLT4_2.arriba.fusions.filter_summary.txt