[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	282076562
Known Splicing Events:	279038203
Partial Novel Splicing Events:	1373477
Novel Splicing Events:	1480444
Filtered Splicing Events:	184438

Total splicing  Junctions:	333137
Known Splicing Junctions:	208515
Partial Novel Splicing Junctions:	56316
Novel Splicing Junctions:	68306

===================================================================
Create BED file ...
Create Interact file ...