.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/1f0c6cbd3be90adbf559cfa8a7e4d7/.command.err
Size: 570 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2)
Attempt

Content

Processing Kallisto file: BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2/abundance.h5
Successfully converted BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2/abundance.h5 to BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2_kallisto_mqc.tsv
  Sample: BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2
  Mean Fragment Length: 114.4 bp
  Median Fragment Length: 109.0 bp
  pct_mito_est_counts: 0.008%
  pct_ribo_est_counts: 0.929%
  pct_hk_est_counts: 0.449%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.015%
  pct_ribo_tpm: 2.842%
  pct_hk_tpm: 0.698%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.295%