.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/9ec02f5092cd4bfc459e59b6b71f1c/.command.log
Size: 728 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/9ec02f5092cd4bfc459e59b6b71f1c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3e/95e31d544769aeef17fd5093ad85d9/BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/9ec02f5092cd4bfc459e59b6b71f1c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3e/95e31d544769aeef17fd5093ad85d9/BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2.md.bam
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_2.md.bai