[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_3.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	151549969
Known Splicing Events:	149894218
Partial Novel Splicing Events:	773799
Novel Splicing Events:	782862
Filtered Splicing Events:	99090

Total splicing  Junctions:	295030
Known Splicing Junctions:	200501
Partial Novel Splicing Junctions:	45548
Novel Splicing Junctions:	48981

===================================================================
Create BED file ...
Create Interact file ...