AIH curated blacklist: matched 11 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 260
Pass (FILTER=PASS): 46 (17.7%)
Fail (FILTER=FAIL): 214 (82.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 11
All 11 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 37
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 30
confidence_below_min(medium<high): 29
confidence_below_min(low<high): 20
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 5
total_reads_below_min(7.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
total_reads_below_min(6.0<8.0): 2
Breakdown by confidence:
high: 46 pass, 10 fail (total: 56)
low: 0 pass, 108 fail (total: 108)
medium: 0 pass, 96 fail (total: 96)
Arriba filter: 260 rows -> 46 PASS; wrote BVT_FFPE_TRNA_stm_09_A23WKFTLT4_1.arriba.fusions.filtered.tsv and BVT_FFPE_TRNA_stm_09_A23WKFTLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: BVT_FFPE_TRNA_stm_09_A23WKFTLT4_1.arriba.fusions.filter_summary.txt