NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (BVT_FFPE_TRNA_bst_02_A23WKFTLT4_1) - dev_rna_exp0012_exp0013-73d51683 - Workflow Tracker

Runs
dev_rna_exp0..13-73d51683
Tasks
GATK4_MARKDUPLICATES (BVT_FFPE_TRNA_bst_02_A23WKFTLT4_1)

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Task Info

Status: succeeded
Hash: 74963f19cd29
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: BVT_FFPE_TRNA_bst_02_A23WKFTLT4_1
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: 0e/9c3597
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/9c3597d8559d5805d8d6d52000350d
Native ID: nf-0e9c3597d8559d5805d8d6d52000350d-ca540

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 60.8 GB / 74.0 GB
Process I/O (rchar / wchar): 62.9 GB / 44.0 GB
Disk I/O (read / write): 32.7 GB / 44.0 GB
Host: i-0eda3fc4bd166b2f2 ( spot)

Runtime

Submitted: Jun 08, 2026 1:42:52 AM
Completed: Jun 08, 2026 2:26:25 AM
Total Duration: 43m 32s

Phases

Queue: 2s
Execution: 41m 26s
Stage/Unstage: 2m 4s