.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/0fdf7f4d0a172035bddcc0d141e575/.command.err
Size: 570 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2)
Attempt

Content

Processing Kallisto file: BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2/abundance.h5
Successfully converted BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2/abundance.h5 to BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2_kallisto_mqc.tsv
  Sample: BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2
  Mean Fragment Length: 121.9 bp
  Median Fragment Length: 115.0 bp
  pct_mito_est_counts: 0.008%
  pct_ribo_est_counts: 0.856%
  pct_hk_est_counts: 0.458%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.016%
  pct_ribo_tpm: 2.625%
  pct_hk_tpm: 0.701%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.098%