Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3f/9430be0e584a9db97884075a58afcf/BVT_FFPE_TRNA_bst_01_03_A23WKFTLT4_3_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/51a801f44b82a09301106ce3f6c001/BVT_FFPE_TRNA_bst_01_03_A23WKFTLT4_3.Chimeric.out.junction
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/7333154b551b365a521aa05d69ae3c/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/7333154b551b365a521aa05d69ae3c/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3f/9430be0e584a9db97884075a58afcf/BVT_FFPE_TRNA_bst_01_03_A23WKFTLT4_3_1.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.9hPYv8bmQb/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary
-sample contains 197204299 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir -J /tmp/nxf.9hPYv8bmQb/BVT_FFPE_TRNA_bst_01_03_A23WKFTLT4_3.Chimeric.out.junction -O /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.9hPYv8bmQb/BVT_FFPE_TRNA_bst_01_03_A23WKFTLT4_3.Chimeric.out.junction
-building interval tree based on /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[2200000], rate=44280.44/min -building interval tree based on /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[2200000], rate=40243.90/min -building interval tree based on /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[2180000], rate=38870.73/min
[2190000], rate=38749.63/min -building interval tree based on /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[2190000], rate=31586.54/min
[2200000], rate=31685.07/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir --filt_file /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
12000000.00 reads per min processed...
9000000.00 reads per min processed...
8000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
5250000.00 reads per min processed...
5333333.33 reads per min processed...
5400000.00 reads per min processed...
5000000.00 reads per min processed...
5076923.08 reads per min processed...
5142857.14 reads per min processed...
5200000.00 reads per min processed...
4941176.47 reads per min processed...
5000000.00 reads per min processed...
5052631.58 reads per min processed...
5100000.00 reads per min processed...
4909090.91 reads per min processed...
4956521.74 reads per min processed...
5000000.00 reads per min processed...
5040000.00 reads per min processed...
4888888.89 reads per min processed...
4928571.43 reads per min processed...
4800000.00 reads per min processed...
4838709.68 reads per min processed...
4727272.73 reads per min processed...
4628571.43 reads per min processed...
4666666.67 reads per min processed...
4702702.70 reads per min processed...
4615384.62 reads per min processed...
4650000.00 reads per min processed...
4682926.83 reads per min processed...
4714285.71 reads per min processed...
4636363.64 reads per min processed...
4666666.67 reads per min processed...
4695652.17 reads per min processed...
4723404.26 reads per min processed...
4653061.22 reads per min processed...
4680000.00 reads per min processed...
4705882.35 reads per min processed...
4641509.43 reads per min processed...
4666666.67 reads per min processed...
4690909.09 reads per min processed...
4714285.71 reads per min processed...
4736842.11 reads per min processed...
4758620.69 reads per min processed...
4779661.02 reads per min processed...
4800000.00 reads per min processed...
4900000.00 reads per min processed...
4918032.79 reads per min processed...
4857142.86 reads per min processed...
4875000.00 reads per min processed...
4892307.69 reads per min processed...
4909090.91 reads per min processed...
4925373.13 reads per min processed...
4869565.22 reads per min processed...
4885714.29 reads per min processed...
4901408.45 reads per min processed...
4916666.67 reads per min processed...
4864864.86 reads per min processed...
4880000.00 reads per min processed...
4894736.84 reads per min processed...
4909090.91 reads per min processed...
4860759.49 reads per min processed...
4875000.00 reads per min processed...
4888888.89 reads per min processed...
4902439.02 reads per min processed...
4915662.65 reads per min processed...
4870588.24 reads per min processed...
4883720.93 reads per min processed...
4896551.72 reads per min processed...
4909090.91 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.9hPYv8bmQb/BVT_FFPE_TRNA_bst_01_03_A23WKFTLT4_3.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -299945.224762
EM: Round [1] log likelihood: -299809.370789
EM: Round [2] log likelihood: -299755.724851
EM: Round [3] log likelihood: -299729.810019
EM: Round [4] log likelihood: -299716.172958
EM: Round [5] log likelihood: -299708.601746
EM: Round [6] log likelihood: -299704.190712
EM: Round [7] log likelihood: -299701.491862
EM: Round [8] log likelihood: -299699.758477
EM: Round [9] log likelihood: -299698.593337
EM: Round [10] log likelihood: -299697.777654
EM: Round [11] log likelihood: -299697.186223
EM: Round [12] log likelihood: -299696.744488
EM: Round [13] log likelihood: -299696.406275
EM: Round [14] log likelihood: -299696.141890
EM: Round [15] log likelihood: -299695.931570
EM: Round [16] log likelihood: -299695.761747
EM: Round [17] log likelihood: -299695.622847
EM: Round [18] log likelihood: -299695.507951
EM: Round [19] log likelihood: -299695.411960
EM: Round [20] log likelihood: -299695.331045
EM: Round [21] log likelihood: -299695.262289
EM: Round [22] log likelihood: -299695.203438
EM: Round [23] log likelihood: -299695.152731
EM: Round [24] log likelihood: -299695.108776
EM: Round [25] log likelihood: -299695.070463
EM: Round [26] log likelihood: -299695.036899
EM: Round [27] log likelihood: -299695.007358
EM: Round [28] log likelihood: -299694.981247
EM: Round [29] log likelihood: -299694.958077
EM: Round [30] log likelihood: -299694.937442
EM: Round [31] log likelihood: -299694.919005
EM: Round [32] log likelihood: -299694.902481
EM: Round [33] log likelihood: -299694.887629
EM: Round [34] log likelihood: -299694.874245
EM: Round [35] log likelihood: -299694.862155
EM: Round [36] log likelihood: -299694.851210
EM: Round [37] log likelihood: -299694.841280
EM: Round [38] log likelihood: -299694.832254
EM: Round [39] log likelihood: -299694.824034
EM: Round [40] log likelihood: -299694.816535
EM: Round [41] log likelihood: -299694.809683
EM: Round [42] log likelihood: -299694.803412
EM: Round [43] log likelihood: -299694.797665
EM: Round [44] log likelihood: -299694.792391
EM: Round [45] log likelihood: -299694.787544
EM: Round [46] log likelihood: -299694.783084
EM: Round [47] log likelihood: -299694.778974
EM: Round [48] log likelihood: -299694.775183
EM: Round [49] log likelihood: -299694.771682
EM: Round [50] log likelihood: -299694.768446
EM: Round [51] log likelihood: -299694.765449
EM: Round [52] log likelihood: -299694.762673
EM: Round [53] log likelihood: -299694.760097
EM: Round [54] log likelihood: -299694.757705
EM: Round [55] log likelihood: -299694.755482
EM: Round [56] log likelihood: -299694.753413
EM: Round [57] log likelihood: -299694.751485
EM: Round [58] log likelihood: -299694.749688
EM: Round [59] log likelihood: -299694.748010
EM: Round [60] log likelihood: -299694.746442
EM: Round [61] log likelihood: -299694.744976
EM: Round [62] log likelihood: -299694.743604
EM: Round [63] log likelihood: -299694.742317
EM: Round [64] log likelihood: -299694.741111
EM: Round [65] log likelihood: -299694.739978
EM: Round [66] log likelihood: -299694.738913
EM: Round [67] log likelihood: -299694.737911
EM: Round [68] log likelihood: -299694.736968
EM: Round [69] log likelihood: -299694.736080
EM: Round [70] log likelihood: -299694.735241
EM: Round [71] log likelihood: -299694.734450
EM: Round [72] log likelihood: -299694.733702
EM: Round [73] log likelihood: -299694.732994
EM: Round [74] log likelihood: -299694.732325
EM: Round [75] log likelihood: -299694.731690
EM: Round [76] log likelihood: -299694.731088
EM: Round [77] log likelihood: -299694.730517
EM: Round [78] log likelihood: -299694.729975
EM: Round [79] log likelihood: -299694.729460
EM: Round [80] log likelihood: -299694.728969
EM: Round [81] log likelihood: -299694.728503
EM: Round [82] log likelihood: -299694.728058
EM: Round [83] log likelihood: -299694.727634
EM: Round [84] log likelihood: -299694.727229
EM: Round [85] log likelihood: -299694.726843
EM: Round [86] log likelihood: -299694.726474
EM: Round [87] log likelihood: -299694.726122
EM: Round [88] log likelihood: -299694.725784
EM: Round [89] log likelihood: -299694.725461
EM: Round [90] log likelihood: -299694.725152
EM: Round [91] log likelihood: -299694.724856
EM: Round [92] log likelihood: -299694.724571
EM: Round [93] log likelihood: -299694.724299
EM: Round [94] log likelihood: -299694.724037
EM: Round [95] log likelihood: -299694.723785
EM: Round [96] log likelihood: -299694.723544
EM: Round [97] log likelihood: -299694.723312
EM: Round [98] log likelihood: -299694.723088
EM: Round [99] log likelihood: -299694.722874
EM: Round [100] log likelihood: -299694.722667
EM: Round [101] log likelihood: -299694.722467
EM: Round [102] log likelihood: -299694.722276
EM: Round [103] log likelihood: -299694.722091
EM: Round [104] log likelihood: -299694.721912
EM: Round [105] log likelihood: -299694.721740
EM: Round [106] log likelihood: -299694.721574
EM: Round [107] log likelihood: -299694.721414
EM: Round [108] log likelihood: -299694.721259
EM: Round [109] log likelihood: -299694.721110
EM: Round [110] log likelihood: -299694.720966
EM: Round [111] log likelihood: -299694.720826
EM: Round [112] log likelihood: -299694.720692
EM: Round [113] log likelihood: -299694.720561
EM: Round [114] log likelihood: -299694.720435
EM: Round [115] log likelihood: -299694.720314
EM: Round [116] log likelihood: -299694.720196
EM: Round [117] log likelihood: -299694.720082
EM: Round [118] log likelihood: -299694.719971
EM: Round [119] log likelihood: -299694.719864
EM: Round [120] log likelihood: -299694.719761
EM: Round [121] log likelihood: -299694.719660
EM: Round [122] log likelihood: -299694.719563
EM: Stopping iterations at round 122 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -299747.756157
EM: Round [1] log likelihood: -299629.867378
EM: Round [2] log likelihood: -299585.479408
EM: Round [3] log likelihood: -299564.827056
EM: Round [4] log likelihood: -299554.235142
EM: Round [5] log likelihood: -299548.446640
EM: Round [6] log likelihood: -299545.106094
EM: Round [7] log likelihood: -299543.075524
EM: Round [8] log likelihood: -299541.778686
EM: Round [9] log likelihood: -299540.911953
EM: Round [10] log likelihood: -299540.308913
EM: Round [11] log likelihood: -299539.874606
EM: Round [12] log likelihood: -299539.552600
EM: Round [13] log likelihood: -299539.308000
EM: Round [14] log likelihood: -299539.118398
EM: Round [15] log likelihood: -299538.968896
EM: Round [16] log likelihood: -299538.849276
EM: Round [17] log likelihood: -299538.752337
EM: Round [18] log likelihood: -299538.672887
EM: Round [19] log likelihood: -299538.607105
EM: Round [20] log likelihood: -299538.552131
EM: Round [21] log likelihood: -299538.505795
EM: Round [22] log likelihood: -299538.466429
EM: Round [23] log likelihood: -299538.432735
EM: Round [24] log likelihood: -299538.403696
EM: Round [25] log likelihood: -299538.378506
EM: Round [26] log likelihood: -299538.356522
EM: Round [27] log likelihood: -299538.337227
EM: Round [28] log likelihood: -299538.320201
EM: Round [29] log likelihood: -299538.305104
EM: Round [30] log likelihood: -299538.291656
EM: Round [31] log likelihood: -299538.279625
EM: Round [32] log likelihood: -299538.268819
EM: Round [33] log likelihood: -299538.259077
EM: Round [34] log likelihood: -299538.250265
EM: Round [35] log likelihood: -299538.242270
EM: Round [36] log likelihood: -299538.234993
EM: Round [37] log likelihood: -299538.228353
EM: Round [38] log likelihood: -299538.222279
EM: Round [39] log likelihood: -299538.216710
EM: Round [40] log likelihood: -299538.211593
EM: Round [41] log likelihood: -299538.206882
EM: Round [42] log likelihood: -299538.202536
EM: Round [43] log likelihood: -299538.198521
EM: Round [44] log likelihood: -299538.194804
EM: Round [45] log likelihood: -299538.191360
EM: Round [46] log likelihood: -299538.188162
EM: Round [47] log likelihood: -299538.185190
EM: Round [48] log likelihood: -299538.182424
EM: Round [49] log likelihood: -299538.179846
EM: Round [50] log likelihood: -299538.177441
EM: Round [51] log likelihood: -299538.175195
EM: Round [52] log likelihood: -299538.173095
EM: Round [53] log likelihood: -299538.171130
EM: Round [54] log likelihood: -299538.169288
EM: Round [55] log likelihood: -299538.167561
EM: Round [56] log likelihood: -299538.165940
EM: Round [57] log likelihood: -299538.164416
EM: Round [58] log likelihood: -299538.162984
EM: Round [59] log likelihood: -299538.161636
EM: Round [60] log likelihood: -299538.160365
EM: Round [61] log likelihood: -299538.159168
EM: Round [62] log likelihood: -299538.158038
EM: Round [63] log likelihood: -299538.156970
EM: Round [64] log likelihood: -299538.155962
EM: Round [65] log likelihood: -299538.155008
EM: Round [66] log likelihood: -299538.154105
EM: Round [67] log likelihood: -299538.153249
EM: Round [68] log likelihood: -299538.152438
EM: Round [69] log likelihood: -299538.151669
EM: Round [70] log likelihood: -299538.150938
EM: Round [71] log likelihood: -299538.150244
EM: Round [72] log likelihood: -299538.149585
EM: Round [73] log likelihood: -299538.148957
EM: Round [74] log likelihood: -299538.148360
EM: Round [75] log likelihood: -299538.147790
EM: Round [76] log likelihood: -299538.147248
EM: Round [77] log likelihood: -299538.146730
EM: Round [78] log likelihood: -299538.146236
EM: Round [79] log likelihood: -299538.145765
EM: Round [80] log likelihood: -299538.145314
EM: Round [81] log likelihood: -299538.144883
EM: Round [82] log likelihood: -299538.144471
EM: Round [83] log likelihood: -299538.144076
EM: Round [84] log likelihood: -299538.143699
EM: Round [85] log likelihood: -299538.143336
EM: Round [86] log likelihood: -299538.142989
EM: Round [87] log likelihood: -299538.142656
EM: Round [88] log likelihood: -299538.142337
EM: Round [89] log likelihood: -299538.142030
EM: Round [90] log likelihood: -299538.141735
EM: Round [91] log likelihood: -299538.141452
EM: Round [92] log likelihood: -299538.141180
EM: Round [93] log likelihood: -299538.140918
EM: Round [94] log likelihood: -299538.140666
EM: Round [95] log likelihood: -299538.140423
EM: Round [96] log likelihood: -299538.140190
EM: Round [97] log likelihood: -299538.139965
EM: Round [98] log likelihood: -299538.139748
EM: Round [99] log likelihood: -299538.139539
EM: Round [100] log likelihood: -299538.139337
EM: Round [101] log likelihood: -299538.139143
EM: Round [102] log likelihood: -299538.138955
EM: Round [103] log likelihood: -299538.138774
EM: Round [104] log likelihood: -299538.138599
EM: Round [105] log likelihood: -299538.138430
EM: Round [106] log likelihood: -299538.138267
EM: Round [107] log likelihood: -299538.138109
EM: Round [108] log likelihood: -299538.137957
EM: Round [109] log likelihood: -299538.137809
EM: Round [110] log likelihood: -299538.137667
EM: Round [111] log likelihood: -299538.137529
EM: Round [112] log likelihood: -299538.137395
EM: Round [113] log likelihood: -299538.137266
EM: Round [114] log likelihood: -299538.137141
EM: Round [115] log likelihood: -299538.137020
EM: Round [116] log likelihood: -299538.136903
EM: Round [117] log likelihood: -299538.136790
EM: Round [118] log likelihood: -299538.136680
EM: Round [119] log likelihood: -299538.136573
EM: Round [120] log likelihood: -299538.136470
EM: Round [121] log likelihood: -299538.136370
EM: Stopping iterations at round 121 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 197204299 > /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir > /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir --annotate /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir
-done, see /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1627, filtered: 13523)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.9hPYv8bmQb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.9hPYv8bmQb/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000232995.7]
WARNING, no entry stored in dbm for [ENSG00000246763.7]
WARNING, no entry stored in dbm for [ENSG00000214019.2]
WARNING, no entry stored in dbm for [ENSG00000278147.1]
WARNING, no entry stored in dbm for [ENSG00000224189.8]
WARNING, no entry stored in dbm for [ENSG00000287236.1]
WARNING, no entry stored in dbm for [ENSG00000286896.1]
WARNING, no entry stored in dbm for [ENSG00000286760.1]
WARNING, no entry stored in dbm for [ENSG00000283907.1]
WARNING, no entry stored in dbm for [ENSG00000254896.1]
WARNING, no entry stored in dbm for [ENSG00000177640.16]
WARNING, no entry stored in dbm for [ENSG00000250091.3]
WARNING, no entry stored in dbm for [ENSG00000218107.1]
WARNING, no entry stored in dbm for [ENSG00000204434.6]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000273598.1]
WARNING, no entry stored in dbm for [ENSG00000236731.1]
WARNING, no entry stored in dbm for [ENSG00000206149.10]
WARNING, no entry stored in dbm for [ENSG00000232133.1]
WARNING, no entry stored in dbm for [ENSG00000229268.1]
WARNING, no entry stored in dbm for [ENSG00000227893.1]
WARNING, no entry stored in dbm for [ENSG00000275131.3]
WARNING, no entry stored in dbm for [ENSG00000254539.1]
WARNING, no entry stored in dbm for [ENSG00000280623.1]
WARNING, no entry stored in dbm for [ENSG00000253438.4]
WARNING, no entry stored in dbm for [ENSG00000246379.8]
WARNING, no entry stored in dbm for [ENSG00000255856.2]
WARNING, no entry stored in dbm for [ENSG00000257501.6]
WARNING, no entry stored in dbm for [ENSG00000224087.1]
WARNING, no entry stored in dbm for [ENSG00000118976.5]
WARNING, no entry stored in dbm for [ENSG00000257698.2]
WARNING, no entry stored in dbm for [ENSG00000223891.6]
WARNING, no entry stored in dbm for [ENSG00000272937.2]
WARNING, no entry stored in dbm for [ENSG00000237225.2]
WARNING, no entry stored in dbm for [ENSG00000249419.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000242111.1]
WARNING, no entry stored in dbm for [ENSG00000234199.3]
WARNING, no entry stored in dbm for [ENSG00000214558.4]
WARNING, no entry stored in dbm for [ENSG00000259848.9]
WARNING, no entry stored in dbm for [ENSG00000235677.1]
WARNING, no entry stored in dbm for [ENSG00000226827.1]
WARNING, no entry stored in dbm for [ENSG00000201641.1]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000243347.2]
WARNING, no entry stored in dbm for [ENSG00000287358.1]
WARNING, no entry stored in dbm for [ENSG00000207441.1]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000278239.1]
WARNING, no entry stored in dbm for [ENSG00000269904.2]
WARNING, no entry stored in dbm for [ENSG00000274993.1]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000279864.2]
WARNING, no entry stored in dbm for [ENSG00000258590.5]
WARNING, no entry stored in dbm for [ENSG00000239213.6]
WARNING, no entry stored in dbm for [ENSG00000257985.1]
WARNING, no entry stored in dbm for [ENSG00000274686.1]
WARNING, no entry stored in dbm for [ENSG00000254412.1]
WARNING, no entry stored in dbm for [ENSG00000233123.1]
WARNING, no entry stored in dbm for [ENSG00000249328.3]
WARNING, no entry stored in dbm for [ENSG00000234575.2]
WARNING, no entry stored in dbm for [ENSG00000196593.9]
WARNING, no entry stored in dbm for [ENSG00000286642.1]
WARNING, no entry stored in dbm for [ENSG00000219682.4]
WARNING, no entry stored in dbm for [ENSG00000236172.7]
WARNING, no entry stored in dbm for [ENSG00000236172.7]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000234231.4]
WARNING, no entry stored in dbm for [ENSG00000264803.1]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000283429.1]
WARNING, no entry stored in dbm for [ENSG00000231503.4]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000250526.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000223566.1]
WARNING, no entry stored in dbm for [ENSG00000229591.1]
WARNING, no entry stored in dbm for [ENSG00000215861.6]
WARNING, no entry stored in dbm for [ENSG00000232940.6]
WARNING, no entry stored in dbm for [ENSG00000261786.1]
WARNING, no entry stored in dbm for [ENSG00000234476.3]
WARNING, no entry stored in dbm for [ENSG00000233858.4]
WARNING, no entry stored in dbm for [ENSG00000226453.2]
WARNING, no entry stored in dbm for [ENSG00000251129.2]
WARNING, no entry stored in dbm for [ENSG00000283422.1]
WARNING, no entry stored in dbm for [ENSG00000257771.6]
WARNING, no entry stored in dbm for [ENSG00000261014.2]
WARNING, no entry stored in dbm for [ENSG00000267719.1]
WARNING, no entry stored in dbm for [ENSG00000239454.1]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000262468.6]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000229086.5]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000224577.3]
WARNING, no entry stored in dbm for [ENSG00000230426.4]
WARNING, no entry stored in dbm for [ENSG00000188825.14]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000231690.3]
WARNING, no entry stored in dbm for [ENSG00000226846.2]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000214110.3]
WARNING, no entry stored in dbm for [ENSG00000259974.3]
WARNING, no entry stored in dbm for [ENSG00000257844.2]
WARNING, no entry stored in dbm for [ENSG00000248568.1]
WARNING, no entry stored in dbm for [ENSG00000250300.1]
WARNING, no entry stored in dbm for [ENSG00000228031.4]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000135477.11]
WARNING, no entry stored in dbm for [ENSG00000235159.1]
WARNING, no entry stored in dbm for [ENSG00000266371.1]
WARNING, no entry stored in dbm for [ENSG00000230104.1]
WARNING, no entry stored in dbm for [ENSG00000255875.2]
WARNING, no entry stored in dbm for [ENSG00000253339.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000281357.3]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000228901.3]
WARNING, no entry stored in dbm for [ENSG00000232963.1]
WARNING, no entry stored in dbm for [ENSG00000235734.4]
WARNING, no entry stored in dbm for [ENSG00000235257.9]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000226363.3]
WARNING, no entry stored in dbm for [ENSG00000228783.1]
WARNING, no entry stored in dbm for [ENSG00000261716.2]
WARNING, no entry stored in dbm for [ENSG00000220323.4]
WARNING, no entry stored in dbm for [ENSG00000241549.8]
WARNING, no entry stored in dbm for [ENSG00000198237.8]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000234323.8]
WARNING, no entry stored in dbm for [ENSG00000237674.1]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000270154.1]
WARNING, no entry stored in dbm for [ENSG00000258888.1]
WARNING, no entry stored in dbm for [ENSG00000236133.2]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000225963.8]
WARNING, no entry stored in dbm for [ENSG00000179918.19]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000233639.7]
WARNING, no entry stored in dbm for [ENSG00000249383.2]
WARNING, no entry stored in dbm for [ENSG00000280179.1]
WARNING, no entry stored in dbm for [ENSG00000250208.6]
WARNING, no entry stored in dbm for [ENSG00000261442.1]
WARNING, no entry stored in dbm for [ENSG00000223361.5]
WARNING, no entry stored in dbm for [ENSG00000218213.1]
WARNING, no entry stored in dbm for [ENSG00000204054.14]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000244708.1]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000243939.1]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000250227.1]
WARNING, no entry stored in dbm for [ENSG00000205176.3]
WARNING, no entry stored in dbm for [ENSG00000226711.7]
WARNING, no entry stored in dbm for [ENSG00000257198.6]
WARNING, no entry stored in dbm for [ENSG00000255087.4]
WARNING, no entry stored in dbm for [ENSG00000255814.2]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000228209.1]
WARNING, no entry stored in dbm for [ENSG00000212663.2]
WARNING, no entry stored in dbm for [ENSG00000232743.2]
WARNING, no entry stored in dbm for [ENSG00000199672.1]
WARNING, no entry stored in dbm for [ENSG00000179523.5]
WARNING, no entry stored in dbm for [ENSG00000233912.1]
WARNING, no entry stored in dbm for [ENSG00000224097.5]
WARNING, no entry stored in dbm for [ENSG00000234125.5]
WARNING, no entry stored in dbm for [ENSG00000201098.1]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000232878.3]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000228045.1]
WARNING, no entry stored in dbm for [ENSG00000273073.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000177699.4]
WARNING, no entry stored in dbm for [ENSG00000248787.2]
WARNING, no entry stored in dbm for [ENSG00000203364.2]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000260139.6]
WARNING, no entry stored in dbm for [ENSG00000258018.2]
WARNING, no entry stored in dbm for [ENSG00000177335.11]
WARNING, no entry stored in dbm for [ENSG00000254166.3]
WARNING, no entry stored in dbm for [ENSG00000259736.1]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000229452.1]
WARNING, no entry stored in dbm for [ENSG00000261799.1]
WARNING, no entry stored in dbm for [ENSG00000235824.5]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000217929.4]
WARNING, no entry stored in dbm for [ENSG00000201852.1]
WARNING, no entry stored in dbm for [ENSG00000277449.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000145835.6]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000217120.1]
WARNING, no entry stored in dbm for [ENSG00000279118.1]
WARNING, no entry stored in dbm for [ENSG00000224186.8]
WARNING, no entry stored in dbm for [ENSG00000287083.1]
WARNING, no entry stored in dbm for [ENSG00000272379.1]
WARNING, no entry stored in dbm for [ENSG00000167747.15]
WARNING, no entry stored in dbm for [ENSG00000278144.1]
WARNING, no entry stored in dbm for [ENSG00000259608.1]
WARNING, no entry stored in dbm for [ENSG00000227883.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000243069.8]
WARNING, no entry stored in dbm for [ENSG00000266865.6]
WARNING, no entry stored in dbm for [ENSG00000255882.1]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000234223.2]
WARNING, no entry stored in dbm for [ENSG00000286499.1]
WARNING, no entry stored in dbm for [ENSG00000239861.1]
WARNING, no entry stored in dbm for [ENSG00000256928.1]
WARNING, no entry stored in dbm for [ENSG00000243352.3]
WARNING, no entry stored in dbm for [ENSG00000256789.1]
WARNING, no entry stored in dbm for [ENSG00000231355.1]
WARNING, no entry stored in dbm for [ENSG00000275131.3]
WARNING, no entry stored in dbm for [ENSG00000235085.3]
WARNING, no entry stored in dbm for [ENSG00000226899.1]
WARNING, no entry stored in dbm for [ENSG00000285847.2]
WARNING, no entry stored in dbm for [ENSG00000288531.1]
WARNING, no entry stored in dbm for [ENSG00000284999.1]
WARNING, no entry stored in dbm for [ENSG00000231762.1]
WARNING, no entry stored in dbm for [ENSG00000232295.7]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000279321.1]
WARNING, no entry stored in dbm for [ENSG00000226409.3]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000232347.1]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000270103.3]
WARNING, no entry stored in dbm for [ENSG00000176868.2]
WARNING, no entry stored in dbm for [ENSG00000285763.1]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000254396.1]
WARNING, no entry stored in dbm for [ENSG00000273550.2]
WARNING, no entry stored in dbm for [ENSG00000285520.1]
WARNING, no entry stored in dbm for [ENSG00000286162.2]
WARNING, no entry stored in dbm for [ENSG00000231563.2]
WARNING, no entry stored in dbm for [ENSG00000259953.2]
WARNING, no entry stored in dbm for [ENSG00000237301.1]
WARNING, no entry stored in dbm for [ENSG00000286483.1]
WARNING, no entry stored in dbm for [ENSG00000288044.1]
WARNING, no entry stored in dbm for [ENSG00000230470.1]
WARNING, no entry stored in dbm for [ENSG00000287569.1]
WARNING, no entry stored in dbm for [ENSG00000270890.1]
WARNING, no entry stored in dbm for [ENSG00000213867.4]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000238290.1]
WARNING, no entry stored in dbm for [ENSG00000213172.3]
WARNING, no entry stored in dbm for [ENSG00000226360.5]
WARNING, no entry stored in dbm for [ENSG00000261641.2]
WARNING, no entry stored in dbm for [ENSG00000280434.1]
WARNING, no entry stored in dbm for [ENSG00000259869.2]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000229700.1]
WARNING, no entry stored in dbm for [ENSG00000243744.2]
WARNING, no entry stored in dbm for [ENSG00000258438.3]
WARNING, no entry stored in dbm for [ENSG00000250164.1]
WARNING, no entry stored in dbm for [ENSG00000213539.4]
WARNING, no entry stored in dbm for [ENSG00000243069.8]
WARNING, no entry stored in dbm for [ENSG00000284620.2]
WARNING, no entry stored in dbm for [ENSG00000267696.6]
WARNING, no entry stored in dbm for [ENSG00000284620.2]
WARNING, no entry stored in dbm for [ENSG00000287839.1]
WARNING, no entry stored in dbm for [ENSG00000284620.2]
WARNING, no entry stored in dbm for [ENSG00000254258.1]
WARNING, no entry stored in dbm for [ENSG00000284620.2]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000284620.2]
WARNING, no entry stored in dbm for [ENSG00000284294.1]
WARNING, no entry stored in dbm for [ENSG00000196115.13]
WARNING, no entry stored in dbm for [ENSG00000244313.3]
WARNING, no entry stored in dbm for [ENSG00000250238.1]
WARNING, no entry stored in dbm for [ENSG00000179918.19]
WARNING, no entry stored in dbm for [ENSG00000259774.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000266865.6]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000244245.1]
WARNING, no entry stored in dbm for [ENSG00000235685.2]
WARNING, no entry stored in dbm for [ENSG00000285822.1]
WARNING, no entry stored in dbm for [ENSG00000262558.1]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000284605.1]
WARNING, no entry stored in dbm for [ENSG00000257527.1]
WARNING, no entry stored in dbm for [ENSG00000260498.6]
WARNING, no entry stored in dbm for [ENSG00000260832.1]
WARNING, no entry stored in dbm for [ENSG00000219410.6]
WARNING, no entry stored in dbm for [ENSG00000258583.7]
WARNING, no entry stored in dbm for [ENSG00000260710.1]
WARNING, no entry stored in dbm for [ENSG00000206356.5]
WARNING, no entry stored in dbm for [ENSG00000206356.5]
WARNING, no entry stored in dbm for [ENSG00000261292.2]
WARNING, no entry stored in dbm for [ENSG00000205890.3]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000287030.1]
WARNING, no entry stored in dbm for [ENSG00000260037.5]
WARNING, no entry stored in dbm for [ENSG00000213849.3]
WARNING, no entry stored in dbm for [ENSG00000254265.1]
WARNING, no entry stored in dbm for [ENSG00000286101.1]
WARNING, no entry stored in dbm for [ENSG00000260715.1]
WARNING, no entry stored in dbm for [ENSG00000260167.1]
WARNING, no entry stored in dbm for [ENSG00000229742.1]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000267458.1]
WARNING, no entry stored in dbm for [ENSG00000237850.7]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000285731.1]
WARNING, no entry stored in dbm for [ENSG00000236504.2]
WARNING, no entry stored in dbm for [ENSG00000115934.11]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000279863.1]
WARNING, no entry stored in dbm for [ENSG00000273257.2]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000287576.1]
WARNING, no entry stored in dbm for [ENSG00000279605.1]
WARNING, no entry stored in dbm for [ENSG00000254859.1]
WARNING, no entry stored in dbm for [ENSG00000259299.1]
WARNING, no entry stored in dbm for [ENSG00000271494.1]
WARNING, no entry stored in dbm for [ENSG00000197558.13]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000253643.6]
WARNING, no entry stored in dbm for [ENSG00000279668.3]
WARNING, no entry stored in dbm for [ENSG00000273765.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000249050.1]
WARNING, no entry stored in dbm for [ENSG00000279122.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000269172.1]
WARNING, no entry stored in dbm for [ENSG00000267784.1]
WARNING, no entry stored in dbm for [ENSG00000285517.1]
WARNING, no entry stored in dbm for [ENSG00000279598.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000254170.1]
WARNING, no entry stored in dbm for [ENSG00000237875.1]
WARNING, no entry stored in dbm for [ENSG00000279529.1]
WARNING, no entry stored in dbm for [ENSG00000227444.1]
WARNING, no entry stored in dbm for [ENSG00000283132.1]
WARNING, no entry stored in dbm for [ENSG00000272473.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000267131.1]
WARNING, no entry stored in dbm for [ENSG00000269696.2]
WARNING, no entry stored in dbm for [ENSG00000227606.2]
WARNING, no entry stored in dbm for [ENSG00000265489.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000233969.2]
WARNING, no entry stored in dbm for [ENSG00000213361.2]
WARNING, no entry stored in dbm for [ENSG00000231302.1]
WARNING, no entry stored in dbm for [ENSG00000263272.1]
WARNING, no entry stored in dbm for [ENSG00000282894.1]
WARNING, no entry stored in dbm for [ENSG00000287702.1]
WARNING, no entry stored in dbm for [ENSG00000271394.1]
WARNING, no entry stored in dbm for [ENSG00000277739.1]
* STAR-Fusion complete. See output: /tmp/nxf.9hPYv8bmQb/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)