AIH curated blacklist: matched 8 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 141
Pass (FILTER=PASS): 9 (6.4%)
Fail (FILTER=FAIL): 132 (93.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 8
All 8 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 23
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 20
confidence_below_min(low<high): 18
confidence_below_min(medium<high): 16
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 2
aih_curated_blacklist: 1
total_reads_below_min(3.0<8.0);aih_curated_blacklist: 1
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 1
Breakdown by confidence:
high: 9 pass, 2 fail (total: 11)
low: 0 pass, 98 fail (total: 98)
medium: 0 pass, 32 fail (total: 32)
Arriba filter: 141 rows -> 9 PASS; wrote BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.arriba.fusions.filtered.tsv and BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.arriba.fusions.filter_summary.txt