File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/08fff8b6532935445035fea49e5c35/.command.err
Size
558 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1)
Attempt

Content

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Processing Kallisto file: BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1/abundance.h5
Successfully converted BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1/abundance.h5 to BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1_kallisto_mqc.tsv
  Sample: BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1
  Mean Fragment Length: 122.1 bp
  Median Fragment Length: 115.0 bp
  pct_mito_est_counts: 0.015%
  pct_ribo_est_counts: 1.974%
  pct_hk_est_counts: 0.622%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.026%
  pct_ribo_tpm: 5.142%
  pct_hk_tpm: 0.862%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 6.087%